Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 1.6e-304 1048.5 503 100.0
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 1.0e-237 826.6 496 78.2
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 3.8e-237 824.7 504 77.0
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 3.0e-234 815.1 487 77.0
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 6.8e-234 813.9 490 76.7
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 2.6e-233 812.0 485 77.7
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 7.5e-233 810.4 497 76.1
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 6.3e-232 807.4 484 77.1
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 8.3e-232 807.0 498 74.9
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 1.4e-231 806.2 504 74.8
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 4.1e-231 804.7 491 75.4
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 5.4e-231 804.3 491 75.2
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 2.0e-230 802.4 492 76.2
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 4.5e-230 801.2 498 75.3
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 1.0e-229 800.0 481 76.9
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 1.0e-229 800.0 498 75.9
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 1.3e-229 799.7 493 74.4
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 1.3e-229 799.7 485 77.1
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 2.9e-229 798.5 497 74.8
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 3.8e-229 798.1 474 76.2
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 6.6e-229 797.3 497 74.2
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 8.6e-229 797.0 500 75.0
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 1.9e-228 795.8 501 73.7
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 1.2e-227 793.1 497 75.1
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 1.6e-227 792.7 506 72.9
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 2.1e-227 792.3 497 74.6
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 6.1e-227 790.8 502 74.1
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 1.0e-226 790.0 487 75.4
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 1.4e-226 789.6 499 75.2
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 1.4e-226 789.6 514 72.2
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 3.0e-226 788.5 487 74.9
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 8.9e-226 786.9 493 76.1
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 1.2e-225 786.6 553 68.4
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 2.6e-225 785.4 491 75.4
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 2.6e-225 785.4 526 71.9
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 3.4e-225 785.0 492 74.0
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 7.5e-225 783.9 495 73.9
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 8.3e-224 780.4 475 76.6
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 1.1e-223 780.0 496 74.2
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 1.1e-223 780.0 484 74.4
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 4.1e-223 778.1 492 74.0
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 7.0e-223 777.3 496 73.6
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 2.7e-222 775.4 515 70.9
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 4.6e-222 774.6 500 73.6
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 1.7e-221 772.7 496 73.6
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 2.3e-221 772.3 482 74.7
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 3.0e-221 771.9 527 70.2
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 3.9e-221 771.5 476 75.0
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 6.6e-221 770.8 484 74.4
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 1.9e-220 769.2 480 75.0
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 1.9e-220 769.2 495 73.1
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 2.5e-220 768.8 496 73.2
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 5.6e-220 767.7 484 73.1
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 5.6e-220 767.7 497 72.6
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 9.5e-220 766.9 477 74.8
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 9.5e-220 766.9 476 74.4
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 6.2e-219 764.2 481 74.4
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 1.4e-218 763.1 500 73.4
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 1.8e-218 762.7 490 72.4
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 4.0e-218 761.5 476 74.6
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 5.2e-218 761.1 473 74.2
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 1.5e-217 759.6 510 69.2
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 3.4e-217 758.4 454 77.3
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 9.8e-217 756.9 458 76.2
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 2.4e-215 752.3 497 71.8
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 2.4e-215 752.3 521 69.9
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 4.1e-215 751.5 488 70.9
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 1.6e-214 749.6 485 72.4
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 1.5e-212 743.0 472 72.7
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 4.3e-212 741.5 486 73.5
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 7.3e-212 740.7 486 72.2
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 1.8e-210 736.1 528 67.6
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 2.3e-210 735.7 440 78.0
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 3.1e-210 735.3 496 70.2
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 2.6e-209 732.3 475 72.8
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 1.4e-207 726.5 511 67.1
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 9.2e-207 723.8 554 63.4
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 1.7e-205 719.5 455 72.5
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 3.6e-203 711.8 516 67.6
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 4.9e-200 701.4 487 67.1
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 2.7e-198 695.7 517 66.5
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 3.0e-197 692.2 498 67.3
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 5.6e-196 688.0 505 66.7
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 6.4e-192 674.5 499 66.1
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 2.4e-191 672.5 506 65.6
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 4.2e-191 671.8 500 62.8
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 1.8e-186 656.4 480 64.4
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 6.4e-184 647.9 475 64.2
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 2.5e-180 636.0 484 66.1
Lj8C254T7 Lonicera japonica HOM05D005885 ORTHO05D008127 9.6e-180 634.0 391 77.0
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 9.6e-180 634.0 490 64.3
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 4.8e-179 631.7 490 61.4
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 9.0e-178 627.5 475 61.1
Gohir.A03G011600 Gossypium hirsutum HOM05D005885 ORTHO05D008127 1.0e-173 614.0 399 73.4
Cc08_g13300 Coffea canephora HOM05D005885 ORTHO05D008127 9.6e-172 607.4 383 75.2
Sc07g0009420 Simmondsia chinensis HOM05D005885 ORTHO05D008127 4.9e-168 595.1 394 70.8
Phvul.002G059800 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 1.1e-167 594.0 388 72.9
C08p15390 Brassica napus HOM05D005885 ORTHO05D008127 2.1e-166 589.7 385 73.0
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 3.9e-157 558.9 477 57.2
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 7.4e-156 554.7 400 66.2
Ah.02g116190 Amaranthus hybridus HOM05D005885 ORTHO05D008127 2.2e-155 553.1 363 71.3
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 2.3e-149 533.1 477 54.7
BcaB03g13192 Brassica carinata HOM05D005885 ORTHO05D008127 3.2e-143 512.7 318 73.6
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 1.1e-138 497.7 481 54.5
Actinidia14469 Actinidia chinensis HOM05D005885 ORTHO05D008127 1.2e-137 494.2 354 67.8
Actinidia02084 Actinidia chinensis HOM05D005885 ORTHO05D008127 5.0e-128 462.2 368 63.0
TAR375G0948 Trochodendron aralioides HOM05D005885 ORTHO05D008127 6.1e-126 455.3 252 81.7
Zm00001eb026960 Zea mays HOM05D005885 ORTHO05D008127 3.0e-125 453.0 390 57.4
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 5.4e-122 442.2 467 48.4
HPP92_020977 Vanilla planifolia HOM05D005885 ORTHO05D008127 1.3e-120 437.6 288 69.4
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 6.5e-120 435.3 446 46.9
SEGI_07453 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 2.2e-115 420.2 291 67.4
Os10g0167600 Oryza sativa ssp. japonica HOM05D005885 ORTHO05D008127 2.8e-115 419.9 348 60.9
Glyma.01G212300 Glycine max HOM05D005885 ORTHO05D008127 3.5e-89 333.2 187 77.0
AUR62010516 Chenopodium quinoa HOM05D005885 ORTHO05D008127 1.7e-72 277.7 159 78.6
MCO05G034 Micromonas commoda HOM05D005885 ORTHO05D268017 3.3e-71 273.5 507 36.9
Lj8A254T79 Lonicera japonica HOM05D005885 ORTHO05D008127 5.1e-48 196.4 111 78.4
SEGI_03642 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 8.5e-43 179.1 94 80.9
TAR375G0547 Trochodendron aralioides HOM05D005885 ORTHO05D008127 5.0e-35 153.3 112 70.5
Phvul.002G151001 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 6.5e-35 152.9 93 73.1
Cc08_g13290 Coffea canephora HOM05D005885 ORTHO05D008127 2.6e-31 141.0 70 88.6
Ah.02g116200 Amaranthus hybridus HOM05D005885 ORTHO05D008127 1.3e-30 138.7 84 75.0
Cre02.g118000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D044175 6.3e-30 136.3 255 34.5
QL09p013714 Quercus lobata HOM05D005885 ORTHO05D008127 4.5e-28 130.2 135 51.1
SEGI_07050 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 1.4e-24 118.6 99 58.6
PRCOL_00007238 Prasinoderma coloniale HOM05D005885 ORTHO05D044175 5.2e-24 116.7 199 35.7
HanXRQChr10g0306201 Helianthus annuus HOM05D005885 ORTHO05D008127 2.6e-23 114.4 70 74.3
COL.COLO4_29220 Corchorus olitorius HOM05D005885 ORTHO05D008127 5.5e-18 96.7 54 87.0
RcHm_v2.0_Chr7g0201231 Rosa chinensis HOM05D005885 ORTHO05D342624 3.6e-09 67.4 48 62.5


User provided reference genes

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