Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02120 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 3.7e-65 251.5 137 100.0
Aqoxy5G03557 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 4.2e-45 184.9 136 77.9
MD13G1110100 Malus domestica HOM05D003777 ORTHO05D004690 9.7e-42 173.7 136 71.3
Prupe.1G234800 Prunus persica HOM05D003777 ORTHO05D004690 1.3e-41 173.3 136 72.8
Thecc.02G272700 Theobroma cacao HOM05D003777 ORTHO05D004690 1.3e-41 173.3 136 68.4
GSVIVG01010320001 Vitis vinifera HOM05D003777 ORTHO05D004690 1.3e-41 173.3 136 70.6
CiPaw.05G173500 Carya illinoinensis HOM05D003777 ORTHO05D004690 6.3e-41 171.0 136 70.6
Dinv18168 Davidia involucrata HOM05D003777 ORTHO05D004690 8.2e-41 170.6 136 71.3
Atru.chr11.2223 Acer truncatum HOM05D003777 ORTHO05D004690 1.1e-40 170.2 136 69.1
FAN07G0030 Fragaria x ananassa HOM05D003777 ORTHO05D004690 1.1e-40 170.2 136 69.1
TAR374G0928 Trochodendron aralioides HOM05D003777 ORTHO05D004690 1.8e-40 169.5 136 69.9
FvH4_4g24580 Fragaria vesca HOM05D003777 ORTHO05D004690 3.1e-40 168.7 136 69.1
FAN12G3799 Fragaria x ananassa HOM05D003777 ORTHO05D004690 3.1e-40 168.7 136 69.1
Duzib268G0959 Durio zibethinus HOM05D003777 ORTHO05D004690 4.1e-40 168.3 136 66.9
TAR374G1267 Trochodendron aralioides HOM05D003777 ORTHO05D004690 5.3e-40 167.9 136 69.1
CANSAT01G1767 Cannabis sativa HOM05D003777 ORTHO05D004690 6.9e-40 167.5 136 71.3
FAN22G1648 Fragaria x ananassa HOM05D003777 ORTHO05D004690 1.2e-39 166.8 136 68.4
FAN17G2971 Fragaria x ananassa HOM05D003777 ORTHO05D004690 1.5e-39 166.4 136 69.1
QL03p055332 Quercus lobata HOM05D003777 ORTHO05D004690 1.5e-39 166.4 137 68.6
MD16G1110000 Malus domestica HOM05D003777 ORTHO05D004690 2.0e-39 166.0 136 69.1
Cfa009302 Carpinus fangiana HOM05D003777 ORTHO05D004690 4.5e-39 164.9 136 69.9
PSO170G4787 Papaver somniferum HOM05D003777 ORTHO05D004690 4.5e-39 164.9 136 69.1
PGR102G0273 Punica granatum HOM05D003777 ORTHO05D004690 7.7e-39 164.1 136 66.9
RcHm_v2.0_Chr4g0431561 Rosa chinensis HOM05D003777 ORTHO05D004690 7.7e-39 164.1 136 69.1
RcHm_v2.0_Chr4g0431581 Rosa chinensis HOM05D003777 ORTHO05D004690 7.7e-39 164.1 136 69.1
Duzib248G0478 Durio zibethinus HOM05D003777 ORTHO05D004690 1.0e-38 163.7 136 68.4
Nitab4.5_0000492g0120 Nicotiana tabacum HOM05D003777 ORTHO05D004690 1.0e-38 163.7 136 67.6
Nitab4.5_0002026g0090 Nicotiana tabacum HOM05D003777 ORTHO05D004690 1.0e-38 163.7 136 66.2
Potri.006G216400 Populus trichocarpa HOM05D003777 ORTHO05D004690 1.0e-38 163.7 136 69.1
Sabra06G0166800 Salix brachista HOM05D003777 ORTHO05D004690 1.0e-38 163.7 136 68.4
Peaxi162Scf00029g02527 Petunia axillaris HOM05D003777 ORTHO05D004690 1.3e-38 163.3 136 68.4
Sed0005823 Sechium edule HOM05D003777 ORTHO05D004690 1.3e-38 163.3 136 68.4
Hund25014 Selenicereus undatus HOM05D003777 ORTHO05D004690 1.3e-38 163.3 136 68.4
TAR622G1358 Trochodendron aralioides HOM05D003777 ORTHO05D004690 1.3e-38 163.3 136 68.4
vmacro01091 Vaccinium macrocarpon HOM05D003777 ORTHO05D004690 1.3e-38 163.3 135 68.9
CSS0004768 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 1.7e-38 162.9 137 67.9
Dinv11003 Davidia involucrata HOM05D003777 ORTHO05D004690 1.7e-38 162.9 136 66.9
CsaV3_5G030580 Cucumis sativus L. HOM05D003777 ORTHO05D004690 2.2e-38 162.5 136 67.6
Nn4g21997 Nelumbo nucifera HOM05D003777 ORTHO05D004690 2.2e-38 162.5 126 69.8
TWI36G1566 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 2.2e-38 162.5 136 68.4
Sc04g0009890 Simmondsia chinensis HOM05D003777 ORTHO05D004690 2.9e-38 162.2 136 64.7
Cpa.g.sc86.2 Carica papaya HOM05D003777 ORTHO05D004690 3.8e-38 161.8 136 69.1
Rhsim12G0035800 Rhododendron simsii HOM05D003777 ORTHO05D004690 3.8e-38 161.8 135 67.4
MSTRG.12471 Avicennia marina HOM05D003777 ORTHO05D004690 5.0e-38 161.4 136 66.2
Manes.13G014300 Manihot esculenta HOM05D003777 ORTHO05D004690 5.0e-38 161.4 136 69.1
MELO3C011898.2 Cucumis melo HOM05D003777 ORTHO05D004690 6.5e-38 161.0 136 66.9
Migut.D00587 Erythranthe guttata HOM05D003777 ORTHO05D004690 6.5e-38 161.0 137 67.2
Actinidia08096 Actinidia chinensis HOM05D003777 ORTHO05D004690 8.5e-38 160.6 136 66.2
DCAR_021625 Daucus carota HOM05D003777 ORTHO05D004690 1.1e-37 160.2 136 63.2
Gohir.A05G311500 Gossypium hirsutum HOM05D003777 ORTHO05D004690 1.1e-37 160.2 136 64.0
Hma1.2p1_0079F.1_g041650 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 1.1e-37 160.2 136 66.2
TWI75G0300 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 1.1e-37 160.2 136 68.4
Gohir.D05G312600 Gossypium hirsutum HOM05D003777 ORTHO05D004690 1.4e-37 159.8 136 64.7
DCAR_021624 Daucus carota HOM05D003777 ORTHO05D004690 1.9e-37 159.5 136 64.0
Nitab4.5_0002757g0020 Nicotiana tabacum HOM05D003777 ORTHO05D004690 2.5e-37 159.1 136 66.9
arahy.Tifrunner.gnm1.ann1.SED4J7 Arachis hypogaea HOM05D003777 ORTHO05D004690 3.2e-37 158.7 136 66.2
Phvul.002G176900 Phaseolus vulgaris HOM05D003777 ORTHO05D004690 3.2e-37 158.7 136 66.9
Nitab4.5_0001925g0190 Nicotiana tabacum HOM05D003777 ORTHO05D004690 4.2e-37 158.3 136 62.5
arahy.Tifrunner.gnm1.ann1.35MH8V Arachis hypogaea HOM05D003777 ORTHO05D004690 5.5e-37 157.9 136 66.2
ClCG05G026250 Citrullus lanatus HOM05D003777 ORTHO05D004690 7.2e-37 157.5 136 66.9
Eucgr.B03455 Eucalyptus grandis HOM05D003777 ORTHO05D004690 7.2e-37 157.5 137 66.4
Gorai.009G334100 Gossypium raimondii HOM05D003777 ORTHO05D004690 7.2e-37 157.5 136 64.7
Ciclev10030955m.g Citrus clementina HOM05D003777 ORTHO05D004690 9.4e-37 157.1 130 68.5
Zm00001eb145240 Zea mays HOM05D003777 ORTHO05D004690 9.4e-37 157.1 136 63.2
CSS0034811 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 1.2e-36 156.8 138 63.8
AUR62017151 Chenopodium quinoa HOM05D003777 ORTHO05D004690 1.2e-36 156.8 136 63.2
Ca_18071_v3 Cicer arietinum L. HOM05D003777 ORTHO05D004690 1.2e-36 156.8 136 66.2
Manes.12G016400 Manihot esculenta HOM05D003777 ORTHO05D004690 1.6e-36 156.4 136 69.1
Sed0021346 Sechium edule HOM05D003777 ORTHO05D004690 1.6e-36 156.4 136 66.2
PSO063G1619 Papaver somniferum HOM05D003777 ORTHO05D004690 2.1e-36 156.0 140 63.6
Actinidia30683 Actinidia chinensis HOM05D003777 ORTHO05D004690 2.7e-36 155.6 136 67.6
arahy.Tifrunner.gnm1.ann1.238UV6 Arachis hypogaea HOM05D003777 ORTHO05D004690 2.7e-36 155.6 136 65.4
arahy.Tifrunner.gnm1.ann1.9WV3XJ Arachis hypogaea HOM05D003777 ORTHO05D004690 2.7e-36 155.6 136 65.4
Oeu015952.1 Olea europaea HOM05D003777 ORTHO05D004690 4.7e-36 154.8 136 65.4
Psat7g080080 Pisum sativum HOM05D003777 ORTHO05D004690 6.1e-36 154.5 136 64.7
Solyc11g062270.2 Solanum lycopersicum HOM05D003777 ORTHO05D004690 6.1e-36 154.5 138 65.9
Lsat_1_v5_gn_2_96961 Lactuca sativa HOM05D003777 ORTHO05D004690 7.9e-36 154.1 137 63.5
Medtr8g079990 Medicago truncatula HOM05D003777 ORTHO05D004690 1.0e-35 153.7 136 65.4
VMungo0251G0828 Vigna mungo HOM05D003777 ORTHO05D004690 1.4e-35 153.3 136 64.7
THA.LOC104825526 Tarenaya hassleriana HOM05D003777 ORTHO05D004690 2.3e-35 152.5 134 67.2
TPR.G17105 Trifolium pratense HOM05D003777 ORTHO05D004690 2.3e-35 152.5 136 64.7
SGA_v2.0_scaffold247G44863 Striga asiatica HOM05D003777 ORTHO05D004690 3.9e-35 151.8 136 62.5
EL10Ac9g22111 Beta vulgaris HOM05D003777 ORTHO05D004690 5.1e-35 151.4 136 64.7
Ah.10g034950 Amaranthus hybridus HOM05D003777 ORTHO05D004690 6.7e-35 151.0 136 62.5
ECA233G1683 Erigeron canadensis HOM05D003777 ORTHO05D004690 6.7e-35 151.0 136 64.7
Sopen11g024250 Solanum pennellii HOM05D003777 ORTHO05D004690 8.8e-35 150.6 136 64.0
Lalb_Chr07g0187251 Lupinus albus HOM05D003777 ORTHO05D004690 1.5e-34 149.8 136 64.0
CAN.G487.1 Capsicum annuum HOM05D003777 ORTHO05D004690 2.0e-34 149.4 136 64.0
Glyma.05G144700 Glycine max HOM05D003777 ORTHO05D004690 3.3e-34 148.7 136 64.7
Lj4g0007172 Lotus japonicus HOM05D003777 ORTHO05D004690 3.3e-34 148.7 136 65.4
CDE07G0923 Ceratophyllum demersum HOM05D003777 ORTHO05D004690 5.7e-34 147.9 136 62.5
Glyma.08G101100 Glycine max HOM05D003777 ORTHO05D004690 5.7e-34 147.9 136 65.4
Sp5g22670 Schrenkiella parvula HOM05D003777 ORTHO05D004690 7.4e-34 147.5 136 62.5
AL2G26340 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 1.3e-33 146.7 136 55.1
HanXRQChr04g0126141 Helianthus annuus HOM05D003777 ORTHO05D004690 1.7e-33 146.4 136 59.6
Lalb_Chr12g0206431 Lupinus albus HOM05D003777 ORTHO05D004690 1.7e-33 146.4 136 63.2
Lalb_Chr12g0206451 Lupinus albus HOM05D003777 ORTHO05D004690 1.7e-33 146.4 136 63.2
A07p32470 Brassica napus HOM05D003777 ORTHO05D004690 2.8e-33 145.6 136 62.5
Os01g0889000 Oryza sativa ssp. japonica HOM05D003777 ORTHO05D004690 2.8e-33 145.6 136 61.0
Aa31LG4G12090 Aethionema arabicum HOM05D003777 ORTHO05D004690 6.3e-33 144.4 136 62.5
MBI11_g31858_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 1.4e-32 143.3 136 62.5
AL2G26380 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 2.4e-32 142.5 136 60.3
PGSC0003DMG400024126 Solanum tuberosum HOM05D003777 ORTHO05D004690 3.1e-32 142.1 126 65.1
BcaB03g15177 Brassica carinata HOM05D003777 ORTHO05D004690 5.3e-32 141.4 136 58.8
AUR62035656 Chenopodium quinoa HOM05D003777 ORTHO05D004690 1.2e-31 140.2 136 54.4
Thhalv10018246m.g Eutrema salsugineum HOM05D003777 ORTHO05D004690 1.2e-31 140.2 137 59.9
BcaB03g15368 Brassica carinata HOM05D003777 ORTHO05D004690 1.5e-31 139.8 136 59.6
AT1G67680 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 3.5e-31 138.7 136 58.8
A07p34190 Brassica napus HOM05D003777 ORTHO05D004690 1.7e-30 136.3 136 58.8
HPP92_012793 Vanilla planifolia HOM05D003777 ORTHO05D004690 2.2e-30 136.0 136 62.5
AT1G67650 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 2.9e-30 135.6 137 53.3
Carub.0002s1406 Capsella rubella HOM05D003777 ORTHO05D004690 3.8e-30 135.2 136 58.8
BcaC08g46176 Brassica carinata HOM05D003777 ORTHO05D004690 6.5e-30 134.4 136 58.1
C06p42580 Brassica napus HOM05D003777 ORTHO05D004690 6.5e-30 134.4 136 58.1
BolC6t39181H Brassica oleracea HOM05D003777 ORTHO05D004690 6.5e-30 134.4 136 58.1
CARHR060270 Cardamine hirsuta HOM05D003777 ORTHO05D004690 8.5e-30 134.0 136 58.8
COL.COLO4_23602 Corchorus olitorius HOM05D003777 ORTHO05D004690 1.9e-29 132.9 90 72.2
ECA238G3243 Erigeron canadensis HOM05D003777 ORTHO05D004690 2.7e-28 129.0 136 50.0
TPR.G27143 Trifolium pratense HOM05D003777 ORTHO05D004690 3.0e-27 125.6 107 61.7
Carub.0002s1402 Capsella rubella HOM05D003777 ORTHO05D004690 6.7e-27 124.4 139 54.7
Lj2C633G4 Lonicera japonica HOM05D003777 ORTHO05D004690 8.8e-27 124.0 137 51.8
unitig_744.g24046 Utricularia gibba HOM05D003777 ORTHO05D004690 1.5e-26 123.2 136 55.1
Lalb_Chr12g0206401 Lupinus albus HOM05D003777 ORTHO05D004690 1.7e-25 119.8 90 64.4
SEGI_14731 Sequoiadendron giganteum HOM05D003777 ORTHO05D004690 4.8e-25 118.2 142 49.3
AUR62017138 Chenopodium quinoa HOM05D003777 ORTHO05D004690 1.8e-24 116.3 136 48.5
Hma1.2p1_0075F.1_g039220 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 1.8e-24 116.3 136 47.1
BraA07t31048Z Brassica rapa HOM05D003777 ORTHO05D004690 4.1e-24 115.2 108 54.6
BolC2t08468H Brassica oleracea HOM05D003777 ORTHO05D004690 3.5e-23 112.1 89 60.7
CSS0018349 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 8.0e-20 100.9 69 69.6
Mapoly0007s0138 Marchantia polymorpha HOM05D003777 ORTHO05D004690 5.2e-19 98.2 135 43.7
SHI17928 Sapria himalayana HOM05D003777 ORTHO05D004690 1.2e-18 97.1 136 47.1
Pp3c19_7700 Physcomitrium patens HOM05D003777 ORTHO05D004690 1.3e-17 93.6 135 43.0
ATR0824G106 Amborella trichopoda HOM05D003777 ORTHO05D004690 2.4e-16 89.4 133 47.4
CBR_g26341 Chara braunii HOM05D003777 ORTHO05D004690 6.5e-14 81.3 159 44.0
SMO356G0370 Selaginella moellendorffii HOM05D003777 ORTHO05D004690 8.5e-14 80.9 134 44.8
PGSC0003DMG400024128 Solanum tuberosum HOM05D003777 ORTHO05D004690 2.3e-06 56.2 40 67.5


User provided reference genes

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