Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02040 Aquilegia oxysepala HOM05D023242 ORTHO05D021350 6.1e-181 637.5 356 100.0
Aqoxy4G01136 Aquilegia oxysepala HOM05D023242 ORTHO05D021350 1.1e-49 201.4 219 45.7
Aqoxy3G03527 Aquilegia oxysepala HOM05D023242 ORTHO05D021350 3.1e-47 193.4 232 44.4
Aqoxy3G03532 Aquilegia oxysepala HOM05D023242 ORTHO05D021350 8.7e-18 95.5 87 51.7
MD13G1071500 Malus domestica HOM05D000001 ORTHO05D000501 1.0e-13 82.0 181 29.8
TAR362G0059 Trochodendron aralioides HOM05D000001 ORTHO05D000501 3.8e-13 80.1 229 28.8
Cfa000496 Carpinus fangiana HOM05D000001 ORTHO05D000501 6.5e-13 79.3 220 27.7
Prupe.1G275400 Prunus persica HOM05D000001 ORTHO05D000501 1.4e-12 78.2 181 28.2
Oeu022759.1 Olea europaea HOM05D000001 ORTHO05D000501 5.5e-12 76.3 178 25.8
MELO3C012100.2 Cucumis melo HOM05D000001 ORTHO05D000501 7.1e-12 75.9 212 28.8
Glyma.01G048400 Glycine max HOM05D000001 ORTHO05D000501 7.1e-12 75.9 181 28.2
Glyma.02G108000 Glycine max HOM05D000001 ORTHO05D000501 9.3e-12 75.5 181 28.2
Sed0009853 Sechium edule HOM05D000001 ORTHO05D000501 1.2e-11 75.1 182 27.5
CSS0002875 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000501 2.7e-11 73.9 218 28.4
ClCG05G024250 Citrullus lanatus HOM05D000001 ORTHO05D000501 3.5e-11 73.6 181 27.1
Mapoly0015s0142 Marchantia polymorpha HOM05D000001 ORTHO05D000501 4.6e-11 73.2 128 32.0
Solyc05g007940.3 Solanum lycopersicum HOM05D000001 ORTHO05D000501 1.0e-10 72.0 189 28.0
Medtr5g040960 Medicago truncatula HOM05D000001 ORTHO05D000501 1.3e-10 71.6 181 28.7
CAN.G736.4 Capsicum annuum HOM05D000001 ORTHO05D000501 2.3e-10 70.9 189 28.0
Cfa000442 Carpinus fangiana HOM05D000001 ORTHO05D000501 2.3e-10 70.9 188 28.7
Duzib138G0079 Durio zibethinus HOM05D000001 ORTHO05D000501 2.3e-10 70.9 233 28.3
DCAR_018604 Daucus carota HOM05D002283 ORTHO05D005725 3.0e-10 70.5 248 26.6
Glyma.20G036100 Glycine max HOM05D000001 ORTHO05D000501 3.0e-10 70.5 181 27.6
Gohir.A07G195000 Gossypium hirsutum HOM05D000001 ORTHO05D000501 6.7e-10 69.3 218 28.4
Glyma.07G059300 Glycine max HOM05D000001 ORTHO05D000501 8.7e-10 68.9 220 26.4
Gohir.D07G201400 Gossypium hirsutum HOM05D000001 ORTHO05D000501 8.7e-10 68.9 218 28.4
Gorai.001G226100 Gossypium raimondii HOM05D000001 ORTHO05D000501 8.7e-10 68.9 218 28.4
Ah.03g135030 Amaranthus hybridus HOM05D000001 ORTHO05D000501 1.9e-09 67.8 179 24.6
MSTRG.702 Avicennia marina HOM05D000001 ORTHO05D000501 1.9e-09 67.8 180 26.1
Duzib133G0742 Durio zibethinus HOM05D000001 ORTHO05D000501 1.9e-09 67.8 218 27.5
Peaxi162Scf00023g00239 Petunia axillaris HOM05D000001 ORTHO05D000501 1.9e-09 67.8 187 26.2
Thecc.01G205800 Theobroma cacao HOM05D000001 ORTHO05D000501 1.9e-09 67.8 232 27.6
Cc11_g12940 Coffea canephora HOM05D000001 ORTHO05D000501 2.5e-09 67.4 178 25.8
CsaV3_5G032730 Cucumis sativus L. HOM05D000001 ORTHO05D000501 2.5e-09 67.4 204 27.5
TPR.G39233 Trifolium pratense HOM05D000001 ORTHO05D000501 2.5e-09 67.4 181 28.7
Sed0009372 Sechium edule HOM05D000001 ORTHO05D000501 3.3e-09 67.0 220 27.7
Psat2g119560 Pisum sativum HOM05D000001 ORTHO05D000501 5.7e-09 66.2 182 26.9
Sopen05g003790 Solanum pennellii HOM05D000001 ORTHO05D000501 5.7e-09 66.2 187 25.1
HPP92_003442 Vanilla planifolia HOM05D000001 ORTHO05D000501 5.7e-09 66.2 225 25.8
Medtr5g040940 Medicago truncatula HOM05D000001 ORTHO05D000501 7.4e-09 65.9 181 28.2
PGR119G2266 Punica granatum HOM05D000001 ORTHO05D000501 7.4e-09 65.9 181 27.6
AUR62032783 Chenopodium quinoa HOM05D000001 ORTHO05D000501 9.6e-09 65.5 179 25.7
Ca_04803_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000501 9.6e-09 65.5 191 28.8
Ca_04805_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000501 9.6e-09 65.5 191 28.8
Cpa.g.sc128.34 Carica papaya HOM05D000001 ORTHO05D000501 1.3e-08 65.1 212 25.9
Dinv07638 Davidia involucrata HOM05D000001 ORTHO05D000501 1.3e-08 65.1 218 27.1
Psat2g119520 Pisum sativum HOM05D000001 ORTHO05D000501 1.3e-08 65.1 182 26.4
Psat2g119640 Pisum sativum HOM05D000001 ORTHO05D000501 2.1e-08 64.3 182 25.8
AUR62005793 Chenopodium quinoa HOM05D000001 ORTHO05D000501 2.8e-08 63.9 179 24.6
Pp3c1_22510 Physcomitrium patens HOM05D000001 ORTHO05D000501 2.8e-08 63.9 233 25.8
AagrBONN_evm.TU.Sc2ySwM_228.2278 Anthoceros agrestis HOM05D000001 ORTHO05D000501 8.2e-08 62.4 181 27.1
Psat2g119440 Pisum sativum HOM05D000001 ORTHO05D000501 8.2e-08 62.4 180 26.1
Sed0028152 Sechium edule HOM05D000001 ORTHO05D000501 1.1e-07 62.0 192 25.0
Aqoxy7G03498 Aquilegia oxysepala HOM05D000001 ORTHO05D021350 2.4e-07 60.8 128 29.7
Lsat_1_v5_gn_8_52620 Lactuca sativa HOM05D000001 ORTHO05D000501 2.4e-07 60.8 180 25.6
MSTRG.12737 Avicennia marina HOM05D000001 ORTHO05D000501 3.1e-07 60.5 243 24.7
MBI01_g26133_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000501 3.1e-07 60.5 128 25.8
PSO384G0348 Papaver somniferum HOM05D028390 ORTHO05D021353 3.1e-07 60.5 137 29.2
Potri.013G134400 Populus trichocarpa HOM05D000001 ORTHO05D000501 5.3e-07 59.7 129 31.8
Lalb_Chr17g0340721 Lupinus albus HOM05D000001 ORTHO05D000501 9.0e-07 58.9 181 26.0
Peaxi162Scf00222g00314 Petunia axillaris HOM05D000001 ORTHO05D000501 1.5e-06 58.2 136 28.7
Nn4g25872 Nelumbo nucifera HOM05D000001 ORTHO05D000501 3.4e-06 57.0 128 27.3
MELO3C012716.2 Cucumis melo HOM05D000001 ORTHO05D000501 1.0e-05 55.5 213 26.8


User provided reference genes

Program Settings