Gene: Pp3c1_22510

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_22510
  • Transcript Identifier Pp3c1_22510V3.2
  • Gene Type Coding gene
  • Location Chr01 : 16707019-16708655 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_22510V3.2
  • pacid 32971925
  • alias Phypa_126361
  • alias Pp1s59_320V6
  • alias Phpat.001G087300
  • uniprot A0A2K1L9A1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT2G02990
GO:0016075
ISO
PLAZA Integrative OrthologyrRNA catabolic process AT2G39780
GO:0010507
ISO
PLAZA Integrative Orthologynegative regulation of autophagy AT2G39780
GO:0009718
ISO
PLAZA Integrative Orthologyanthocyanin-containing compound biosynthetic process AT2G02990
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT2G02990
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT2G02990
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT2G02990
GO:0060866
ISO
PLAZA Integrative Orthologyleaf abscission Solyc05g007940.3
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence Solyc05g007940.3
GO:0006401
IBA
GOA DatabaseRNA catabolic process
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004540
ISO
PLAZA Integrative Orthologyribonuclease activity AT2G02990
GO:0004521
IBA
GOA Databaseendoribonuclease activity
GO:0033897
IEA
GOA Databaseribonuclease T2 activity
GO:0033897
IEA
InterProribonuclease T2 activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT2G39780
GO:0010168
ISO
PLAZA Integrative OrthologyER body AT2G39780
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT2G39780
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G02990
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G39780
GO:0005576
IBA
GOA Databaseextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036430 Ribonuclease T2-like superfamily
IPR001568 Ribonuclease T2-like
IPR033697 Ribonuclease T2, eukaryotic
Mapman id Description
16.5.11.1 RNA processing.RNA modification.tRNA-derived fragment biogenesis.T2-type RNase (RNS)