Gene: Solyc05g007940.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g007940.3
  • Transcript Identifier Solyc05g007940.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 2415686-2418454 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g007940.3.1
  • uniprot A0A3Q7GDT4
  • gene_id Solyc05g007940

Descriptions

  • Description LERNALX L.esculentum ribonuclease lx
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0060866
IDA
Gene Ontologyleaf abscission1
GO:0010150
IDA
Gene Ontologyleaf senescence2
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0006401
IBA
GOA DatabaseRNA catabolic process
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT1G26820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0033897
IEA
GOA Databaseribonuclease T2 activity
GO:0033897
IEA
InterProribonuclease T2 activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004521
IBA
GOA Databaseendoribonuclease activity
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IBA
GOA Databaseextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033697 Ribonuclease T2, eukaryotic
IPR001568 Ribonuclease T2-like
IPR036430 Ribonuclease T2-like superfamily
Mapman id Description
16.5.11.1 RNA processing.RNA modification.tRNA-derived fragment biogenesis.T2-type RNase (RNS)