Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 4.0e-165 584.7 303 100.0
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 2.6e-132 475.7 303 80.9
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 1.6e-129 466.5 303 78.9
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.8e-128 463.0 303 84.8
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 1.1e-127 460.3 303 77.6
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 1.5e-127 459.9 303 78.5
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 3.3e-127 458.8 303 77.2
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 2.7e-121 439.1 306 75.2
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 2.7e-121 439.1 301 75.7
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 3.9e-120 435.3 302 75.5
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 8.8e-120 434.1 300 75.3
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 8.8e-120 434.1 305 74.1
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 8.8e-120 434.1 301 74.1
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 2.6e-119 432.6 305 74.1
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 1.3e-118 430.3 298 76.2
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 1.7e-118 429.9 303 72.9
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 2.8e-118 429.1 298 75.5
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 8.2e-118 427.6 301 74.4
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 1.4e-117 426.8 302 72.8
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 2.4e-117 426.0 301 72.8
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 5.3e-117 424.9 303 71.6
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 7.0e-117 424.5 304 73.4
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 2.6e-116 422.5 300 73.7
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 2.6e-116 422.5 302 73.2
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 3.5e-116 422.2 299 74.9
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 1.0e-115 420.6 321 69.2
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 2.2e-115 419.5 303 71.9
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 2.2e-115 419.5 301 71.8
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 3.8e-115 418.7 321 68.8
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 5.0e-115 418.3 300 73.0
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 1.1e-114 417.2 299 74.2
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 1.1e-114 417.2 299 74.6
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 1.5e-114 416.8 304 74.0
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 1.9e-114 416.4 300 72.7
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 2.5e-114 416.0 304 74.7
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 3.2e-114 415.6 299 73.6
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 9.4e-114 414.1 299 73.2
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.2e-113 413.7 299 73.2
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 1.6e-113 413.3 304 73.0
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 2.1e-113 412.9 300 72.0
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 3.6e-113 412.1 334 68.0
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 3.6e-113 412.1 300 72.0
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 8.0e-113 411.0 300 72.0
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 8.0e-113 411.0 351 64.7
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 1.0e-112 410.6 303 71.0
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 1.8e-112 409.8 305 70.8
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.3e-112 409.5 303 73.9
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 5.2e-112 408.3 298 71.5
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 2.0e-111 406.4 324 67.0
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 3.3e-111 405.6 300 70.7
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 4.4e-111 405.2 327 69.1
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 7.5e-111 404.4 301 69.8
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 9.7e-111 404.1 301 71.1
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 2.8e-110 402.5 280 73.9
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 6.3e-110 401.4 303 71.6
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 1.1e-109 400.6 301 70.8
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 3.1e-109 399.1 280 74.3
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 3.1e-109 399.1 262 78.6
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 4.1e-109 398.7 304 72.4
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 1.2e-108 397.1 300 69.3
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 1.7e-107 393.3 366 60.4
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 2.2e-107 392.9 300 70.7
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 3.8e-107 392.1 300 69.3
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 6.5e-107 391.3 296 70.9
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 6.5e-107 391.3 296 70.9
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 8.5e-107 391.0 296 70.9
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.1e-106 390.6 303 70.3
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 4.2e-106 388.7 294 70.7
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 2.7e-105 386.0 282 70.6
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 8.0e-105 384.4 301 67.4
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 8.0e-105 384.4 299 69.6
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 8.0e-105 384.4 300 68.3
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 1.8e-104 383.3 256 77.3
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 4.0e-104 382.1 368 58.7
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 4.0e-104 382.1 301 67.4
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 5.2e-104 381.7 322 65.8
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 6.8e-104 381.3 303 68.0
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 7.5e-103 377.9 276 72.1
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 1.1e-101 374.0 300 67.0
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 1.6e-100 370.2 256 73.4
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 1.0e-99 367.5 280 71.8
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 1.6e-97 360.1 256 74.2
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 1.0e-96 357.5 258 72.5
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 5.2e-96 355.1 259 74.1
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 6.8e-96 354.8 317 63.4
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 8.8e-96 354.4 342 57.9
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 2.0e-95 353.2 256 73.0
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 3.4e-95 352.4 292 66.1
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 9.8e-95 350.9 327 59.9
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 1.7e-94 350.1 307 61.6
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 7.0e-93 344.7 301 63.8
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 1.2e-92 344.0 321 59.8
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 5.9e-92 341.7 302 65.2
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 2.3e-91 339.7 369 54.5
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 4.3e-90 335.5 213 77.5
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 1.2e-89 334.0 284 63.4
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 4.7e-89 332.0 253 70.8
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 4.7e-89 332.0 213 77.9
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 8.9e-88 327.8 331 59.2
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 2.6e-87 326.2 209 78.5
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 2.9e-86 322.8 259 66.0
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 3.7e-86 322.4 234 71.4
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.4e-85 319.7 255 68.6
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 5.4e-85 318.5 326 55.2
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 1.2e-84 317.4 250 70.4
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 1.7e-83 313.5 255 68.6
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 1.7e-83 313.5 247 68.4
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 1.2e-81 307.4 298 55.7
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 6.2e-81 305.1 257 65.4
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.6e-79 299.7 303 57.4
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 2.2e-78 296.6 273 63.7
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 2.0e-76 290.0 185 78.4
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 3.0e-75 286.2 246 65.9
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 7.3e-74 281.6 351 49.9
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.6e-73 280.4 291 55.7
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 8.1e-73 278.1 226 62.8
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 3.4e-71 272.7 165 82.4
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 3.7e-70 269.2 192 69.3
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 4.1e-69 265.8 296 52.0
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 1.6e-68 263.8 226 64.6
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 2.6e-63 246.5 154 82.5
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 2.4e-56 223.4 202 60.9
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 2.0e-55 220.3 155 71.0
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 1.1e-50 204.5 129 82.2
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 7.4e-34 148.7 121 62.0
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 2.5e-26 123.6 303 30.0
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 1.3e-25 121.3 335 31.6
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 7.2e-21 105.5 85 65.9
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 2.4e-16 90.5 89 56.2
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 1.7e-14 84.3 324 29.0
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 7.9e-12 75.5 52 75.0
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 6.7e-11 72.4 50 68.0
COL.COLO4_38165 Corchorus olitorius HOM05D011921 ORTHO05D160408 4.8e-09 66.2 181 35.9
Lalb_Chr12g0195851 Lupinus albus HOM05D005817 ORTHO05D007140 1.1e-08 65.1 52 61.5
CARHR145100 Cardamine hirsuta HOM05D005817 ORTHO05D007140 5.0e-06 56.2 72 51.4


User provided reference genes

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