Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 0.0e+00 1178.3 600 100.0
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.5e-259 899.4 601 74.0
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 2.2e-255 885.6 600 72.5
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 1.9e-251 872.5 602 72.4
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 6.2e-250 867.5 604 72.2
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 9.2e-246 853.6 604 71.5
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 3.0e-244 848.6 603 71.6
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 3.3e-243 845.1 600 70.7
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 6.2e-242 840.9 605 70.1
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 4.4e-240 834.7 601 69.1
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.1e-237 825.9 594 69.5
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.7e-236 822.8 601 67.4
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 8.9e-233 810.4 604 68.2
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 1.5e-232 809.7 596 68.0
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 1.5e-232 809.7 603 67.8
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 5.8e-232 807.7 600 67.8
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 5.8e-232 807.7 604 67.4
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 2.9e-231 805.4 607 67.7
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 3.8e-231 805.1 604 68.4
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 3.8e-231 805.1 618 67.5
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 3.2e-230 802.0 605 68.1
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 9.2e-230 800.4 638 64.6
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 7.8e-229 797.3 602 67.3
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 1.0e-228 797.0 602 66.1
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 2.3e-228 795.8 619 65.9
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.1e-227 793.5 609 67.5
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 6.2e-226 787.7 607 65.9
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 3.1e-225 785.4 632 65.0
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 6.9e-225 784.3 610 65.7
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 9.0e-225 783.9 605 65.6
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 1.5e-224 783.1 618 64.7
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 4.4e-224 781.6 605 66.0
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 4.4e-224 781.6 605 66.8
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 5.8e-224 781.2 611 66.6
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 1.7e-223 779.6 596 66.3
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 6.4e-223 777.7 601 65.6
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 6.4e-223 777.7 601 66.4
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 1.4e-222 776.5 601 65.6
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 5.4e-222 774.6 604 66.4
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 7.1e-222 774.2 602 65.8
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 1.6e-221 773.1 605 65.5
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 2.1e-221 772.7 600 64.2
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 2.7e-221 772.3 601 65.6
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 3.5e-221 771.9 599 65.8
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 3.5e-221 771.9 601 65.1
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 4.6e-221 771.5 600 63.5
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 1.7e-220 769.6 596 64.4
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 1.7e-220 769.6 602 65.6
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 1.7e-220 769.6 603 65.7
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 1.7e-220 769.6 605 65.5
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 1.1e-219 766.9 603 64.3
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 1.5e-219 766.5 592 65.7
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 2.5e-219 765.8 605 64.6
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 9.6e-219 763.8 602 65.3
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 9.6e-219 763.8 597 64.3
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 1.3e-218 763.5 603 64.5
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 1.6e-218 763.1 605 65.1
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 3.6e-218 761.9 602 65.1
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 3.1e-217 758.8 605 64.3
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 6.9e-217 757.7 595 63.5
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 1.2e-216 756.9 603 64.0
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 1.2e-216 756.9 603 64.3
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 2.0e-216 756.1 571 65.8
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 1.3e-215 753.4 605 64.0
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.3e-215 753.4 597 63.5
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 2.2e-215 752.7 618 62.3
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 2.2e-215 752.7 601 63.6
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 3.8e-215 751.9 605 64.3
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 7.1e-214 747.7 603 63.2
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 2.7e-213 745.7 600 63.0
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 4.6e-213 745.0 542 70.3
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 6.0e-213 744.6 605 64.0
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 1.0e-212 743.8 610 64.9
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 3.3e-211 738.8 613 61.2
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 7.4e-211 737.6 606 63.2
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 2.1e-210 736.1 602 61.8
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 1.4e-209 733.4 613 62.2
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 3.1e-209 732.3 612 61.3
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 2.0e-208 729.6 591 62.1
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 4.5e-208 728.4 606 62.7
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 4.5e-208 728.4 604 61.6
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 7.6e-208 727.6 598 62.2
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 1.3e-207 726.9 558 65.2
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 1.9e-206 723.0 587 63.4
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 5.5e-206 721.5 608 60.5
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 5.5e-206 721.5 604 60.6
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 1.2e-205 720.3 608 60.2
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 1.2e-205 720.3 602 60.6
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 2.7e-205 719.2 604 60.6
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 7.9e-205 717.6 598 62.0
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 1.0e-204 717.2 603 60.4
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 3.0e-204 715.7 602 61.1
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 5.1e-204 714.9 600 60.0
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 8.7e-204 714.1 591 60.7
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 8.7e-204 714.1 599 59.3
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 5.6e-203 711.4 606 60.6
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 7.4e-203 711.1 523 65.8
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 9.6e-203 710.7 597 60.1
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 1.1e-201 707.2 609 59.9
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 3.8e-199 698.7 606 62.5
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 5.5e-198 694.9 590 61.5
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 1.5e-195 686.8 599 58.8
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 3.3e-195 685.6 600 60.0
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 4.3e-195 685.3 602 60.0
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 9.7e-195 684.1 599 58.6
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 4.8e-194 681.8 600 59.5
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.8e-194 681.8 600 59.5
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 2.4e-193 679.5 606 59.2
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 3.1e-193 679.1 603 59.4
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.2e-192 677.2 600 59.3
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 1.7e-191 673.3 598 57.9
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 8.5e-191 671.0 600 59.0
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 1.9e-190 669.8 523 65.6
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 2.2e-186 656.4 588 57.3
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 7.7e-184 647.9 598 56.9
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.9e-183 646.0 592 57.9
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 7.0e-177 624.8 609 55.2
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 3.2e-174 615.9 592 54.9
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 1.2e-173 614.0 625 55.5
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 2.4e-169 599.7 587 54.5
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 7.0e-169 598.2 599 54.1
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 1.8e-164 583.6 601 53.9
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 4.0e-156 555.8 598 50.2
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 7.5e-155 551.6 467 60.6
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.4e-148 530.8 443 62.1
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 1.7e-143 513.8 591 48.7
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 1.1e-132 478.0 394 64.7
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 1.7e-127 460.7 626 42.7
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 6.4e-122 442.2 319 69.9
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.4e-121 441.0 318 67.9
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 1.2e-120 438.0 461 49.2
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 1.1e-116 424.9 513 46.6
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 8.4e-114 415.2 612 43.0
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 4.2e-113 412.9 358 61.5
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.2e-104 384.8 356 57.9
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 2.9e-90 337.0 267 66.3
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 7.4e-86 322.4 489 39.3
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 8.2e-77 292.4 490 39.2
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 1.3e-69 268.5 197 68.5
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 4.5e-67 260.0 183 71.6
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 1.9e-65 254.6 224 58.0
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 2.2e-58 231.1 162 68.5
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 6.7e-55 219.5 141 70.2
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 3.0e-47 194.1 360 40.0
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 6.1e-40 169.9 119 65.5
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 1.5e-38 165.2 126 62.7
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 1.9e-33 148.3 113 61.1
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 2.5e-33 147.9 113 61.1
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 3.6e-32 144.1 182 48.9
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.0e-31 142.5 97 70.1
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 1.8e-31 141.7 219 43.4
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.0e-31 141.0 97 69.1
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 2.0e-30 138.3 80 78.8
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 5.7e-30 136.7 135 54.8
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 8.3e-29 132.9 80 77.5
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 1.2e-22 112.5 180 41.1
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 1.3e-21 109.0 82 64.6
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 1.5e-17 95.5 104 53.8
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 2.0e-14 85.1 56 67.9
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 3.7e-13 80.9 65 56.9
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 5.4e-12 77.0 65 53.8
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 2.7e-11 74.7 135 39.3
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 9.5e-09 66.2 37 86.5
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 6.2e-08 63.5 35 80.0
TAR636G1761 Trochodendron aralioides HOM05D004159 ORTHO05D415208 6.2e-08 63.5 73 45.2
Medtr6g022570 Medicago truncatula HOM05D004159 ORTHO05D005858 2.3e-07 61.6 86 34.9
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 5.8e-06 57.0 34 73.5


User provided reference genes

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