Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.1e-148 530.0 273 100.0
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 1.2e-123 446.8 273 83.2
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 1.2e-123 446.8 273 83.2
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 1.3e-106 390.2 274 73.0
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 1.3e-106 390.2 273 72.5
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 2.5e-105 386.0 273 73.3
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 2.1e-104 382.9 273 71.4
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.7e-104 382.5 273 71.4
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 5.2e-103 378.3 273 71.4
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 8.8e-103 377.5 273 70.3
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 3.3e-102 375.6 284 68.3
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.3e-101 373.6 273 70.0
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 1.3e-101 373.6 273 70.0
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 2.2e-101 372.9 273 71.1
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 2.8e-101 372.5 272 70.2
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 2.8e-101 372.5 273 70.7
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 2.8e-101 372.5 272 69.9
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 8.2e-101 370.9 274 70.8
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.1e-100 370.5 274 72.3
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 1.1e-100 370.5 274 70.1
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.8e-100 369.8 274 71.9
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 3.1e-100 369.0 275 69.5
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 3.1e-100 369.0 275 70.2
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 9.1e-100 367.5 273 68.5
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 1.2e-99 367.1 272 68.4
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 1.2e-99 367.1 272 68.8
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 2.0e-99 366.3 275 68.4
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 2.0e-99 366.3 269 69.5
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.6e-99 365.9 274 70.4
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 2.6e-99 365.9 273 69.2
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 5.9e-99 364.8 273 70.3
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 5.9e-99 364.8 273 70.0
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 1.0e-98 364.0 274 70.1
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 1.0e-98 364.0 273 68.9
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 1.3e-98 363.6 274 71.5
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 1.3e-98 363.6 275 69.8
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 1.7e-98 363.2 273 68.9
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 2.2e-98 362.8 273 68.5
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 2.2e-98 362.8 272 69.9
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 3.8e-98 362.1 272 69.1
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 8.5e-98 360.9 275 68.4
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 1.1e-97 360.5 272 68.4
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 1.1e-97 360.5 274 68.2
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 1.1e-97 360.5 272 67.3
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 1.5e-97 360.1 274 68.2
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 2.5e-97 359.4 273 67.4
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.2e-97 359.0 283 66.8
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 4.2e-97 358.6 276 68.5
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 5.5e-97 358.2 273 68.9
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 9.4e-97 357.5 273 67.0
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 9.4e-97 357.5 272 68.8
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 9.4e-97 357.5 286 66.1
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 9.4e-97 357.5 275 70.5
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 9.4e-97 357.5 273 67.4
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 1.2e-96 357.1 275 66.5
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.2e-96 357.1 275 68.0
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 1.6e-96 356.7 274 68.2
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 2.1e-96 356.3 273 68.9
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.7e-96 355.9 275 67.6
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.7e-96 355.9 275 67.6
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 3.6e-96 355.5 273 67.8
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 3.6e-96 355.5 274 67.9
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 4.7e-96 355.1 274 67.9
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 4.7e-96 355.1 273 67.8
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 6.1e-96 354.8 273 66.7
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 6.1e-96 354.8 273 66.7
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 1.0e-95 354.0 274 67.2
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.0e-95 354.0 276 67.8
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 1.0e-95 354.0 300 65.0
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 1.4e-95 353.6 273 68.5
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.4e-95 353.6 275 67.3
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.8e-95 353.2 273 66.3
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 2.3e-95 352.8 272 67.6
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 5.2e-95 351.7 273 66.7
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 6.7e-95 351.3 273 66.7
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 6.7e-95 351.3 274 65.3
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 8.8e-95 350.9 273 65.6
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 8.8e-95 350.9 273 66.7
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 1.2e-94 350.5 273 67.8
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 1.2e-94 350.5 276 65.9
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.5e-94 350.1 273 65.6
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.5e-94 350.1 273 65.6
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 2.0e-94 349.7 279 69.2
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 5.7e-94 348.2 275 65.8
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 2.2e-93 346.3 287 65.5
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 1.1e-92 344.0 332 57.5
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 1.1e-92 344.0 273 66.7
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 4.1e-92 342.0 274 65.7
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 5.3e-92 341.7 273 65.9
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 7.0e-92 341.3 273 66.3
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 9.1e-92 340.9 273 66.3
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 2.7e-91 339.3 274 65.7
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 3.5e-91 339.0 345 55.7
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 5.9e-91 338.2 273 63.7
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 5.9e-91 338.2 275 66.5
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 7.7e-91 337.8 276 65.6
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 1.3e-90 337.0 308 59.1
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 1.3e-90 337.0 308 59.1
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 2.9e-90 335.9 275 65.8
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 6.5e-90 334.7 273 65.9
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 1.1e-89 334.0 275 67.3
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 1.5e-89 333.6 275 66.9
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 1.9e-89 333.2 361 55.7
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 2.5e-89 332.8 275 64.0
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 2.5e-89 332.8 256 66.8
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 5.5e-89 331.6 273 65.2
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 5.5e-89 331.6 276 65.2
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 2.1e-88 329.7 298 60.1
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 8.0e-88 327.8 275 65.1
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 6.8e-87 324.7 279 64.2
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 7.5e-86 321.2 264 65.2
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 9.8e-86 320.9 289 62.6
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 8.3e-85 317.8 295 55.9
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 1.1e-84 317.4 270 62.6
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 1.4e-84 317.0 278 61.9
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 1.4e-84 317.0 320 56.2
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 2.4e-84 316.2 259 66.0
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.2e-83 313.9 334 55.4
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 3.8e-82 308.9 278 61.5
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 2.5e-81 306.2 232 67.7
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 1.6e-80 303.5 229 70.7
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 1.6e-80 303.5 274 60.2
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 8.0e-80 301.2 239 66.1
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 1.5e-78 297.0 233 67.8
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 4.4e-78 295.4 269 59.9
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 9.8e-78 294.3 267 61.8
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 2.2e-77 293.1 233 64.8
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 8.3e-77 291.2 237 62.9
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 2.3e-74 283.1 235 64.7
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.3e-74 283.1 234 64.1
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 1.5e-73 280.4 244 62.3
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 8.9e-71 271.2 259 59.1
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 2.9e-69 266.2 234 62.8
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 4.9e-69 265.4 161 79.5
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 8.3e-69 264.6 287 51.6
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 7.3e-65 251.5 340 45.6
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 1.6e-64 250.4 273 55.3
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 4.7e-64 248.8 277 52.3
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 8.0e-64 248.1 178 74.7
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 4.0e-63 245.7 287 50.9
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 7.5e-62 241.5 275 50.2
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.4e-60 237.3 265 53.2
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 2.4e-60 236.5 174 67.2
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 4.1e-60 235.7 262 50.8
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 3.5e-59 232.6 174 68.4
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 1.0e-58 231.1 232 54.7
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 2.5e-57 226.5 234 56.8
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 4.7e-56 222.2 204 59.8
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 8.1e-56 221.5 171 64.3
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 2.3e-55 219.9 270 46.3
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 3.1e-55 219.5 148 72.3
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 4.9e-53 212.2 169 66.9
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 2.1e-51 206.8 139 72.7
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 6.0e-51 205.3 183 61.7
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 6.2e-48 195.3 224 49.1
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 4.4e-46 189.1 133 72.2
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.2e-44 182.6 125 69.6
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 7.1e-44 181.8 151 64.9
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 7.1e-44 181.8 169 59.8
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.1e-39 166.4 202 50.0
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 2.0e-38 163.7 258 45.0
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 2.6e-38 163.3 152 67.1
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 4.9e-37 159.1 214 46.7
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 7.1e-36 155.2 234 42.7
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 9.3e-36 154.8 139 59.7
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 6.9e-31 138.7 274 39.4
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 8.4e-29 131.7 136 55.9
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.4e-28 130.2 230 38.3
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 5.1e-26 122.5 91 67.0
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 6.7e-26 122.1 165 44.2
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 8.7e-26 121.7 88 69.3
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.7e-21 107.5 71 71.8
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 5.5e-20 102.4 232 36.2
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 7.1e-20 102.1 76 69.7
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.5e-17 94.4 67 67.2
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 5.0e-13 79.3 76 56.6
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 3.2e-12 76.6 174 35.6
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 8.7e-10 68.6 138 36.2
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 3.7e-08 63.2 41 70.7
CSS0014250 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 6.9e-07 58.9 34 82.4
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 4.5e-06 56.2 42 66.7


User provided reference genes

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