Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 3.2e-139 498.4 257 100.0
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 6.1e-130 467.6 257 93.8
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 3.9e-84 315.5 237 67.9
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 1.5e-83 313.5 234 67.9
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 1.3e-79 300.4 234 66.7
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 4.9e-79 298.5 256 60.9
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 2.4e-78 296.2 215 70.2
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 1.2e-77 293.9 251 62.5
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 2.7e-77 292.7 260 60.0
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 7.8e-77 291.2 243 63.0
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 1.3e-76 290.4 217 67.7
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 5.1e-76 288.5 229 63.3
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 6.6e-76 288.1 212 67.0
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 3.3e-75 285.8 231 62.8
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 4.3e-75 285.4 254 60.2
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 7.3e-75 284.6 253 60.1
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 9.5e-75 284.3 254 60.2
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 3.6e-74 282.3 251 59.4
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 4.7e-74 282.0 250 60.8
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 1.1e-73 280.8 245 60.4
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 2.3e-73 279.6 224 62.9
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 2.3e-73 279.6 230 63.0
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 2.3e-73 279.6 215 65.6
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 3.1e-73 279.3 249 59.4
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 6.8e-73 278.1 215 65.1
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 8.9e-73 277.7 212 67.0
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 2.0e-72 276.6 215 64.7
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 7.6e-72 274.6 194 71.1
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 1.3e-71 273.9 251 57.4
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 1.7e-71 273.5 255 58.8
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 4.9e-71 271.9 218 64.7
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 4.9e-71 271.9 236 60.2
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 1.1e-70 270.8 211 64.5
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 1.4e-70 270.4 248 59.7
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 1.4e-70 270.4 224 62.9
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 2.4e-70 269.6 218 65.1
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 4.1e-70 268.9 245 58.4
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 7.1e-70 268.1 236 61.0
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 7.1e-70 268.1 233 59.7
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 2.1e-69 266.5 236 60.6
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 2.1e-69 266.5 236 60.6
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 2.1e-69 266.5 236 60.6
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 2.7e-69 266.2 237 60.3
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 4.6e-69 265.4 205 63.9
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 6.0e-69 265.0 199 66.8
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 1.3e-68 263.8 236 58.5
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 1.7e-68 263.5 235 59.6
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.7e-68 263.5 243 58.0
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 3.9e-68 262.3 244 57.8
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 5.1e-68 261.9 224 61.6
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 5.1e-68 261.9 243 57.6
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 2.5e-67 259.6 241 57.7
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 3.3e-67 259.2 214 64.5
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 3.3e-67 259.2 218 61.0
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 4.3e-67 258.8 242 56.6
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 4.3e-67 258.8 222 59.5
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 1.6e-66 256.9 219 59.8
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 2.1e-66 256.5 249 54.6
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 2.1e-66 256.5 176 71.0
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 2.8e-66 256.1 164 76.2
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 4.7e-66 255.4 255 54.1
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 6.2e-66 255.0 205 63.9
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 8.1e-66 254.6 218 60.1
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 1.1e-65 254.2 248 57.3
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 1.1e-65 254.2 243 57.6
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.8e-65 253.4 219 59.8
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 3.1e-65 252.7 258 53.9
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 1.2e-64 250.8 214 58.4
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 2.0e-64 250.0 242 55.8
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 2.6e-64 249.6 253 53.0
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 2.6e-64 249.6 259 53.3
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 4.4e-64 248.8 207 63.3
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 5.8e-64 248.4 209 62.2
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 9.9e-64 247.7 208 62.5
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 9.9e-64 247.7 210 61.9
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 1.3e-63 247.3 216 56.9
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 1.3e-63 247.3 216 56.9
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 8.4e-63 244.6 215 56.3
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 8.4e-63 244.6 239 54.0
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.1e-62 244.2 239 54.8
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 1.4e-62 243.8 258 53.1
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 2.4e-62 243.0 213 56.8
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 5.4e-62 241.9 227 55.5
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 5.4e-62 241.9 245 53.9
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 7.1e-62 241.5 240 55.4
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 9.3e-62 241.1 237 53.6
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 9.3e-62 241.1 211 56.9
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 9.3e-62 241.1 211 59.7
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 2.1e-61 240.0 194 63.9
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 1.3e-60 237.3 238 55.5
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 3.0e-60 236.1 255 51.0
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 8.7e-60 234.6 237 52.7
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 2.5e-59 233.0 223 56.1
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 4.3e-59 232.3 186 65.1
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 4.3e-59 232.3 229 53.3
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 5.6e-59 231.9 250 51.2
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 9.6e-59 231.1 239 50.6
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.3e-58 230.7 226 52.7
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.8e-58 229.6 226 52.7
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 4.8e-58 228.8 237 51.9
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 2.4e-57 226.5 250 50.0
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 4.0e-57 225.7 225 52.4
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 2.6e-56 223.0 208 58.2
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 6.4e-55 218.4 158 66.5
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.4e-54 217.2 190 58.4
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 5.4e-54 215.3 169 64.5
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 2.1e-53 213.4 193 56.0
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 3.9e-52 209.1 232 50.4
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 3.9e-52 209.1 244 46.7
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 3.9e-52 209.1 182 62.6
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 8.7e-52 208.0 238 48.3
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 4.3e-51 205.7 251 49.0
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 5.6e-51 205.3 255 44.7
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 5.6e-51 205.3 212 49.1
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 2.1e-50 203.4 236 50.4
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 2.8e-50 203.0 206 55.3
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 8.4e-47 191.4 169 60.4
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 5.5e-46 188.7 162 63.0
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 1.1e-43 181.0 177 51.4
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 8.4e-39 164.9 169 49.1
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 2.7e-37 159.8 118 63.6
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.1e-35 154.5 196 46.9
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 1.5e-35 154.1 120 65.0
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 5.7e-35 152.1 166 48.8
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 7.4e-35 151.8 126 58.7
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 5.3e-33 145.6 122 59.8
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 2.9e-31 139.8 134 54.5
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 6.7e-28 128.6 175 42.9
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 9.4e-22 108.2 189 37.6
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 8.2e-18 95.1 130 41.5
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 2.0e-16 90.5 143 42.0
Manes.17G110201 Manihot esculenta HOM05D005088 ORTHO05D006914 3.4e-16 89.7 64 67.2
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 3.4e-16 89.7 140 41.4
BcaC02g09844 Brassica carinata HOM05D005088 ORTHO05D017652 8.2e-10 68.6 85 48.2
C04p35970 Brassica napus HOM05D005088 ORTHO05D017652 5.3e-09 65.9 84 47.6
BolC4t25202H Brassica oleracea HOM05D005088 ORTHO05D017652 5.3e-09 65.9 84 47.6
Sc09g0007140 Simmondsia chinensis HOM05D005088 ORTHO05D389638 8.5e-07 58.5 41 63.4


User provided reference genes

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