Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 7.8e-269 929.9 461 100.0
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 1.1e-161 573.9 477 63.9
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 4.6e-152 542.0 476 59.7
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 2.0e-144 516.5 453 57.2
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 2.7e-144 516.2 478 56.5
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 1.0e-143 514.2 461 57.0
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.1e-142 510.8 479 55.9
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 4.3e-142 508.8 463 56.6
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 1.2e-141 507.3 464 57.5
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 3.6e-141 505.8 470 55.3
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 4.7e-141 505.4 476 56.1
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 5.2e-140 501.9 463 55.9
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.1e-137 494.2 468 54.9
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 1.9e-137 493.4 465 54.8
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 4.1e-137 492.3 463 55.9
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 7.1e-137 491.5 475 54.3
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 7.1e-137 491.5 474 54.2
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 7.1e-137 491.5 488 53.1
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 9.2e-137 491.1 475 56.0
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 1.2e-136 490.7 496 52.6
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 2.1e-136 490.0 465 55.3
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.7e-136 489.6 468 54.9
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 3.5e-136 489.2 483 53.0
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 1.7e-135 486.9 509 52.7
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 5.1e-135 485.3 468 54.5
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 5.1e-135 485.3 491 52.3
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.5e-134 483.8 473 55.4
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.5e-134 483.0 467 53.7
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 5.6e-134 481.9 477 53.7
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 7.3e-134 481.5 465 54.4
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 1.2e-133 480.7 467 53.7
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.8e-133 479.6 488 52.3
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 4.7e-133 478.8 468 54.3
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 6.2e-133 478.4 484 53.3
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 2.3e-132 476.5 464 53.4
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 3.1e-132 476.1 467 52.2
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 3.1e-132 476.1 474 52.3
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 5.2e-132 475.3 470 52.6
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 6.8e-132 474.9 437 55.1
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 8.9e-132 474.6 472 54.2
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.2e-131 474.2 466 55.8
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 2.0e-131 473.4 467 52.0
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.0e-131 473.4 468 53.8
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 2.6e-131 473.0 466 55.8
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 2.6e-131 473.0 465 53.3
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 2.6e-131 473.0 466 52.6
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 3.4e-131 472.6 464 54.3
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 7.6e-131 471.5 441 54.9
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.3e-130 470.7 467 53.7
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 4.9e-130 468.8 468 51.9
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 6.4e-130 468.4 466 55.4
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 7.1e-129 464.9 462 53.7
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 7.1e-129 464.9 484 52.3
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.2e-128 464.2 503 48.7
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.6e-128 463.8 433 56.4
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.6e-128 463.8 443 55.5
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 2.1e-128 463.4 436 53.0
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.0e-127 461.1 445 54.6
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 3.0e-127 459.5 472 52.1
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 8.6e-127 458.0 480 50.8
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 8.6e-127 458.0 468 51.7
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 2.5e-126 456.4 479 50.3
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 4.3e-126 455.7 399 57.9
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 2.8e-125 453.0 468 51.3
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 4.7e-125 452.2 451 52.5
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 8.9e-124 448.0 521 47.2
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 1.5e-123 447.2 468 51.1
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.6e-123 446.4 471 49.5
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 2.6e-123 446.4 474 51.3
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 4.4e-123 445.7 456 53.1
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 9.9e-123 444.5 470 50.9
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 9.9e-123 444.5 468 50.9
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 1.3e-122 444.1 435 54.0
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 6.4e-122 441.8 391 58.1
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 1.1e-121 441.0 475 51.2
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 2.4e-121 439.9 469 50.3
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 3.2e-121 439.5 473 50.3
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 1.2e-120 437.6 473 50.3
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.6e-120 437.2 448 51.8
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 3.5e-120 436.0 473 50.5
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 3.5e-120 436.0 463 51.8
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 1.3e-119 434.1 381 57.2
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.1e-118 431.0 473 49.5
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 4.3e-118 429.1 467 50.1
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 9.6e-118 427.9 473 49.9
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 1.3e-117 427.6 468 49.8
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 1.6e-117 427.2 565 43.4
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.1e-116 422.9 338 62.7
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.5e-115 420.6 365 60.5
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 2.2e-114 416.8 445 49.9
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 1.6e-112 410.6 372 56.7
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 1.1e-110 404.4 437 48.1
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 4.3e-110 402.5 403 50.6
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 2.1e-109 400.2 443 48.1
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 9.3e-105 384.8 485 46.8
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 1.0e-103 381.3 354 57.9
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 1.0e-103 381.3 354 57.9
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 2.7e-96 356.7 467 43.0
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 1.5e-94 350.9 465 44.5
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 4.3e-94 349.4 323 54.8
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 5.5e-89 332.4 285 56.5
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 7.2e-89 332.0 235 68.9
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 3.3e-86 323.2 352 49.4
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 2.2e-85 320.5 269 58.7
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 6.9e-84 315.5 337 50.4
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 2.0e-83 313.9 495 37.2
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 1.0e-79 301.6 446 41.0
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 8.5e-66 255.4 344 43.6
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 9.7e-62 241.9 236 53.4
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 2.0e-59 234.2 418 37.8
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 2.0e-54 217.6 288 43.1
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 7.2e-49 199.1 234 49.1
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 6.8e-47 192.6 373 35.1
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 8.8e-47 192.2 173 54.9
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 1.1e-44 185.3 160 59.4
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 1.1e-44 185.3 160 59.4
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 8.0e-40 169.1 213 41.3
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 1.8e-39 167.9 420 30.2
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 8.0e-32 142.5 180 45.0
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.5e-30 138.3 116 60.3
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 1.7e-29 134.8 177 45.2
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 6.4e-29 132.9 105 61.0
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 5.4e-28 129.8 152 48.0
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 1.2e-27 128.6 195 41.0
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 2.1e-24 117.9 151 45.7
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 9.5e-17 92.4 67 65.7
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 1.8e-15 88.2 234 26.5
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 4.6e-11 73.6 90 47.8
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 1.3e-10 72.0 108 38.9
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.6e-09 66.6 51 64.7
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.6e-08 65.1 51 62.7
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 9.0e-07 59.3 108 31.5


User provided reference genes

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