Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 1.4e-146 523.1 299 100.0
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.1e-85 320.9 261 75.1
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 1.4e-80 303.9 223 75.3
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 1.4e-80 303.9 252 68.3
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 2.6e-79 299.7 230 72.6
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 4.4e-79 298.9 296 65.5
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.4e-77 293.9 240 70.0
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 2.4e-77 293.1 247 72.5
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 1.2e-76 290.8 265 67.5
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 1.2e-76 290.8 269 63.2
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 1.2e-76 290.8 251 70.1
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.5e-76 290.4 269 58.4
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 2.6e-76 289.7 261 64.4
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 7.7e-76 288.1 227 71.4
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 2.2e-75 286.6 233 66.5
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.1e-74 284.3 269 59.5
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.9e-74 283.5 231 61.5
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 5.5e-74 282.0 282 56.0
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 1.6e-73 280.4 264 63.6
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.1e-73 280.0 298 57.0
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.1e-73 280.0 221 71.9
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 2.7e-73 279.6 234 74.8
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.4e-72 277.3 255 65.5
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 3.0e-72 276.2 255 63.1
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 3.9e-72 275.8 298 65.1
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 8.8e-72 274.6 268 61.2
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 8.8e-72 274.6 265 61.9
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 2.0e-71 273.5 268 60.4
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 2.6e-71 273.1 253 62.8
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 2.6e-71 273.1 290 62.8
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 7.4e-71 271.6 230 74.3
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 7.4e-71 271.6 361 50.7
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.7e-70 270.4 253 66.0
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 2.8e-70 269.6 230 67.4
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 3.7e-70 269.2 274 59.9
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 4.8e-70 268.9 285 57.9
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 6.3e-70 268.5 270 60.0
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 6.3e-70 268.5 270 60.0
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 6.3e-70 268.5 270 60.0
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 1.1e-69 267.7 255 62.0
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 2.4e-69 266.5 302 50.7
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 2.4e-69 266.5 292 57.5
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 3.1e-69 266.2 274 59.1
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 3.1e-69 266.2 288 59.7
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 9.1e-69 264.6 262 62.6
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 1.2e-68 264.2 230 67.0
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 1.2e-68 264.2 224 59.8
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 7.7e-68 261.5 239 64.9
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.0e-67 261.2 252 68.7
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 1.0e-67 261.2 230 65.2
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 2.9e-67 259.6 291 57.7
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 3.8e-67 259.2 262 64.9
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 5.0e-67 258.8 245 64.1
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.5e-66 257.3 276 57.6
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.2e-66 256.1 174 76.4
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 9.4e-66 254.6 290 55.9
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 1.2e-63 247.7 231 64.5
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.5e-63 247.3 173 73.4
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.5e-63 247.3 229 67.2
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 2.6e-63 246.5 232 62.1
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 5.7e-63 245.4 293 58.4
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.3e-62 244.2 234 63.7
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 1.7e-62 243.8 264 65.2
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 2.2e-62 243.4 243 64.2
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 3.7e-62 242.7 258 60.9
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 5.3e-61 238.8 222 66.7
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.2e-60 237.7 200 59.0
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 2.0e-60 236.9 266 62.8
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 2.0e-60 236.9 229 65.5
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 2.0e-60 236.9 276 62.3
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.3e-59 234.2 293 53.6
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.3e-59 234.2 293 53.6
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 5.0e-59 232.3 303 55.1
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.5e-58 230.7 278 55.0
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 2.5e-58 229.9 270 60.4
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 4.2e-58 229.2 215 68.4
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 5.5e-58 228.8 288 53.1
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 8.0e-57 224.9 292 52.4
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 8.0e-57 224.9 224 60.7
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 4.0e-56 222.6 308 49.4
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 4.0e-56 222.6 181 72.4
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 2.0e-55 220.3 292 51.0
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 3.4e-55 219.5 224 63.4
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 3.4e-55 219.5 293 50.2
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 3.4e-55 219.5 227 56.4
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 7.5e-55 218.4 225 66.7
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 1.1e-53 214.5 232 64.2
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 4.5e-52 209.1 267 56.6
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 2.3e-51 206.8 232 55.6
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 8.6e-51 204.9 299 48.8
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 1.1e-50 204.5 252 57.1
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 2.1e-49 200.3 266 52.6
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 2.8e-49 199.9 182 72.5
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 4.0e-48 196.1 232 46.6
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.1e-45 188.0 160 71.9
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 3.5e-44 183.0 215 60.0
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 3.5e-44 183.0 215 60.0
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 5.9e-44 182.2 238 54.6
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 1.3e-43 181.0 279 46.2
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 6.6e-43 178.7 225 59.1
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 3.3e-42 176.4 232 46.6
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 4.3e-42 176.0 163 57.7
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 1.6e-41 174.1 174 51.1
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 2.0e-39 167.2 111 84.7
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.4e-37 161.0 118 64.4
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 2.0e-36 157.1 144 56.2
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 7.8e-36 155.2 120 72.5
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 6.6e-35 152.1 226 53.5
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.5e-31 141.0 231 42.4
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 4.4e-31 139.4 282 44.7
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 3.9e-27 126.3 158 52.5
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 1.5e-23 114.4 105 52.4
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.4e-21 107.1 104 74.0
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 6.0e-20 102.4 218 38.1
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 4.3e-18 96.3 102 69.6
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 3.0e-11 73.6 42 78.6
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 4.0e-08 63.2 155 29.7
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 9.0e-08 62.0 99 36.4
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 2.2e-06 57.4 36 69.4


User provided reference genes

Program Settings