Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy515s001 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 2.1e-91 339.0 166 100.0
Aqoxy3G01254 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 1.7e-48 196.4 144 71.5
Haze_12269 Corylus avellana HOM05D003359 ORTHO05D006537 5.3e-42 174.9 114 73.7
Cfa009233 Carpinus fangiana HOM05D003359 ORTHO05D004472 1.2e-41 173.7 114 72.8
Atru.chr11.2161 Acer truncatum HOM05D003359 ORTHO05D004472 1.5e-41 173.3 126 71.4
Lj3A1060T75 Lonicera japonica HOM05D003359 ORTHO05D004472 2.4e-39 166.0 117 69.2
Haze_07805 Corylus avellana HOM05D003359 ORTHO05D004472 1.6e-38 163.3 114 71.1
Gohir.D02G157400 Gossypium hirsutum HOM05D003359 ORTHO05D004472 2.7e-38 162.5 115 70.4
Hund06039 Selenicereus undatus HOM05D003359 ORTHO05D004472 2.7e-38 162.5 106 73.6
TAR622G1186 Trochodendron aralioides HOM05D003359 ORTHO05D004472 5.6e-36 154.8 146 58.9
Ciclev10030938m.g Citrus clementina HOM05D003359 ORTHO05D004472 1.1e-34 150.6 80 86.2
Phvul.002G259200 Phaseolus vulgaris HOM05D003359 ORTHO05D004472 2.4e-34 149.4 80 83.8
TPR.G6291 Trifolium pratense HOM05D003359 ORTHO05D004472 3.1e-34 149.1 89 76.4
arahy.Tifrunner.gnm1.ann1.JIIR6A Arachis hypogaea HOM05D003359 ORTHO05D004472 4.0e-34 148.7 80 83.8
Dinv14737 Davidia involucrata HOM05D003359 ORTHO05D004472 9.0e-34 147.5 80 85.0
Glyma.11G243600 Glycine max HOM05D003359 ORTHO05D004472 9.0e-34 147.5 80 83.8
GSVIVG01000554001 Vitis vinifera HOM05D003359 ORTHO05D005275 9.0e-34 147.5 79 84.8
TPR.G6223 Trifolium pratense HOM05D003359 ORTHO05D004472 1.2e-33 147.1 80 82.5
PSO478G4543 Papaver somniferum HOM05D003359 ORTHO05D004472 1.5e-33 146.7 144 57.6
Sc14g0008780 Simmondsia chinensis HOM05D003359 ORTHO05D004472 1.5e-33 146.7 80 83.8
VMungo1383G0093 Vigna mungo HOM05D003359 ORTHO05D004472 1.5e-33 146.7 80 83.8
QL03p056989 Quercus lobata HOM05D003359 ORTHO05D004472 2.0e-33 146.4 95 75.8
Ca_25137_v3 Cicer arietinum L. HOM05D003359 ORTHO05D004472 2.6e-33 146.0 80 83.8
Phvul.001G255500 Phaseolus vulgaris HOM05D003359 ORTHO05D004472 2.6e-33 146.0 80 83.8
Glyma.08G131400 Glycine max HOM05D003359 ORTHO05D004472 3.4e-33 145.6 80 82.5
MSTRG.7949 Avicennia marina HOM05D003359 ORTHO05D004472 4.5e-33 145.2 80 82.5
Cpa.g.sc33.46 Carica papaya HOM05D003359 ORTHO05D004472 4.5e-33 145.2 79 83.5
Migut.K00614 Erythranthe guttata HOM05D003359 ORTHO05D004472 4.5e-33 145.2 80 83.8
Gohir.A03G133100 Gossypium hirsutum HOM05D003359 ORTHO05D004472 4.5e-33 145.2 80 83.8
Lj4g0008357 Lotus japonicus HOM05D003359 ORTHO05D004472 4.5e-33 145.2 80 82.5
Oeu057546.1 Olea europaea HOM05D003359 ORTHO05D004472 4.5e-33 145.2 83 81.9
CiPaw.05G179800 Carya illinoinensis HOM05D003359 ORTHO05D004472 5.8e-33 144.8 80 82.5
Lalb_Chr07g0185431 Lupinus albus HOM05D003359 ORTHO05D004472 5.8e-33 144.8 80 83.8
Actinidia37443 Actinidia chinensis HOM05D003359 ORTHO05D004472 1.0e-32 144.1 80 83.8
Glyma.05G174200 Glycine max HOM05D003359 ORTHO05D004472 1.0e-32 144.1 80 81.2
arahy.Tifrunner.gnm1.ann1.5678GR Arachis hypogaea HOM05D003359 ORTHO05D004472 1.3e-32 143.7 80 81.2
Manes.13G022100 Manihot esculenta HOM05D003359 ORTHO05D004472 1.3e-32 143.7 80 81.2
Gorai.005G176600 Gossypium raimondii HOM05D003359 ORTHO05D004472 1.7e-32 143.3 80 81.2
Nn4g22564 Nelumbo nucifera HOM05D003359 ORTHO05D004472 1.7e-32 143.3 80 81.2
arahy.Tifrunner.gnm1.ann1.9A08C8 Arachis hypogaea HOM05D003359 ORTHO05D004472 2.2e-32 142.9 89 75.3
CSS0009419 Camellia sinensis var. sinensis HOM05D003359 ORTHO05D004472 2.2e-32 142.9 80 81.2
Lj6C814T12 Lonicera japonica HOM05D003359 ORTHO05D004472 2.2e-32 142.9 80 82.5
MBI19_g09304_MAGBIO Magnolia biondii HOM05D003359 ORTHO05D004472 2.2e-32 142.9 79 83.5
TPR.G30530 Trifolium pratense HOM05D003359 ORTHO05D004472 2.2e-32 142.9 80 81.2
arahy.Tifrunner.gnm1.ann1.6M8RVH Arachis hypogaea HOM05D003359 ORTHO05D004472 2.9e-32 142.5 89 75.3
Duzib251G0748 Durio zibethinus HOM05D003359 ORTHO05D004472 2.9e-32 142.5 80 81.2
Thecc.02G263100 Theobroma cacao HOM05D003359 ORTHO05D004472 2.9e-32 142.5 80 82.5
Lalb_Chr23g0277621 Lupinus albus HOM05D003359 ORTHO05D004472 3.8e-32 142.1 79 79.7
MELO3C010698.2 Cucumis melo HOM05D003359 ORTHO05D004472 4.9e-32 141.7 80 83.8
Eucgr.H02477 Eucalyptus grandis HOM05D003359 ORTHO05D004472 4.9e-32 141.7 80 81.2
QL08p013031 Quercus lobata HOM05D003359 ORTHO05D004472 4.9e-32 141.7 80 81.2
AT3G26380 Arabidopsis thaliana HOM05D003359 ORTHO05D004472 6.5e-32 141.4 80 78.8
Lj6g0024639 Lotus japonicus HOM05D003359 ORTHO05D004472 6.5e-32 141.4 89 74.2
SalBow2G3613 Salvia bowleyana HOM05D003359 ORTHO05D004472 6.5e-32 141.4 80 82.5
AL5G15150 Arabidopsis lyrata HOM05D003359 ORTHO05D004472 1.1e-31 140.6 80 78.8
vmacro16179 Vaccinium macrocarpon HOM05D003359 ORTHO05D004472 1.1e-31 140.6 80 80.0
Carub.0005s0430 Capsella rubella HOM05D003359 ORTHO05D004472 1.4e-31 140.2 80 80.0
ClCG08G017630 Citrullus lanatus HOM05D003359 ORTHO05D004472 1.4e-31 140.2 80 82.5
Prupe.1G247000 Prunus persica HOM05D003359 ORTHO05D004472 1.4e-31 140.2 89 75.3
QL03p057097 Quercus lobata HOM05D003359 ORTHO05D004472 1.4e-31 140.2 95 73.7
A02p34540 Brassica napus HOM05D003359 ORTHO05D004472 1.9e-31 139.8 80 77.5
BraA02t08464Z Brassica rapa HOM05D003359 ORTHO05D004472 1.9e-31 139.8 80 77.5
Thhalv10003806m.g Eutrema salsugineum HOM05D003359 ORTHO05D004472 1.9e-31 139.8 80 77.5
Medtr3g086580 Medicago truncatula HOM05D003359 ORTHO05D004472 1.9e-31 139.8 80 80.0
BcaC03g17337 Brassica carinata HOM05D003359 ORTHO05D004472 2.5e-31 139.4 80 77.5
C02p52860 Brassica napus HOM05D003359 ORTHO05D004472 2.5e-31 139.4 80 77.5
BolC2t11365H Brassica oleracea HOM05D003359 ORTHO05D004472 2.5e-31 139.4 80 77.5
CANSAT01G0511 Cannabis sativa HOM05D003359 ORTHO05D004472 2.5e-31 139.4 78 82.1
AUR62005279 Chenopodium quinoa HOM05D003359 ORTHO05D004472 2.5e-31 139.4 80 81.2
BcaB07g30230 Brassica carinata HOM05D003359 ORTHO05D004472 3.2e-31 139.0 80 76.2
Medtr2g096530 Medicago truncatula HOM05D003359 ORTHO05D004472 3.2e-31 139.0 80 77.5
SGA_v2.0_scaffold71G23972 Striga asiatica HOM05D003359 ORTHO05D004472 3.2e-31 139.0 80 80.0
AUR62024240 Chenopodium quinoa HOM05D003359 ORTHO05D004472 4.2e-31 138.7 80 78.8
Sp2g15530 Schrenkiella parvula HOM05D003359 ORTHO05D004472 4.2e-31 138.7 80 78.8
Aqoxy5G03710 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 5.5e-31 138.3 89 74.2
AUR62005500 Chenopodium quinoa HOM05D003359 ORTHO05D004472 5.5e-31 138.3 80 80.0
Eucgr.H02480 Eucalyptus grandis HOM05D003359 ORTHO05D004472 5.5e-31 138.3 89 73.0
FAN12G3248 Fragaria x ananassa HOM05D003359 ORTHO05D004472 5.5e-31 138.3 116 59.5
Nitab4.5_0002787g0030 Nicotiana tabacum HOM05D003359 ORTHO05D004472 5.5e-31 138.3 122 56.6
QL03p057173 Quercus lobata HOM05D003359 ORTHO05D004472 5.5e-31 138.3 149 53.7
RcHm_v2.0_Chr4g0433401 Rosa chinensis HOM05D003359 ORTHO05D004472 5.5e-31 138.3 89 73.0
Psat5g091760 Pisum sativum HOM05D003359 ORTHO05D004472 7.1e-31 137.9 80 76.2
COL.COLO4_23483 Corchorus olitorius HOM05D003359 ORTHO05D004472 9.3e-31 137.5 80 78.8
FAN12G2341 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.2e-30 137.1 116 58.6
Lj3C275T6 Lonicera japonica HOM05D003359 ORTHO05D004472 1.2e-30 137.1 92 72.8
Psat7g058680 Pisum sativum HOM05D003359 ORTHO05D004472 1.2e-30 137.1 80 75.0
EL10Ac6g13871 Beta vulgaris HOM05D003359 ORTHO05D004472 2.1e-30 136.3 80 78.8
QL03p057181 Quercus lobata HOM05D003359 ORTHO05D004472 2.1e-30 136.3 80 80.0
CAN.G272.4 Capsicum annuum HOM05D003359 ORTHO05D004472 2.7e-30 136.0 106 62.3
Duzib268G0493 Durio zibethinus HOM05D003359 ORTHO05D004472 2.7e-30 136.0 80 75.0
Nitab4.5_0000229g0100 Nicotiana tabacum HOM05D003359 ORTHO05D004472 2.7e-30 136.0 106 60.4
Ca_17782_v3 Cicer arietinum L. HOM05D003359 ORTHO05D004472 3.5e-30 135.6 80 78.8
CsaV3_2G025010 Cucumis sativus L. HOM05D003359 ORTHO05D004472 3.5e-30 135.6 80 80.0
Eucgr.H02478 Eucalyptus grandis HOM05D003359 ORTHO05D004472 3.5e-30 135.6 89 70.8
Peaxi162Scf00128g00456 Petunia axillaris HOM05D003359 ORTHO05D004472 3.5e-30 135.6 80 76.2
unitig_22.g6428 Utricularia gibba HOM05D003359 ORTHO05D004472 3.5e-30 135.6 80 76.2
Aa31LG2G6140 Aethionema arabicum HOM05D003359 ORTHO05D006537 4.6e-30 135.2 80 78.8
FvH4_4g25930 Fragaria vesca HOM05D003359 ORTHO05D004472 4.6e-30 135.2 89 71.9
Medtr8g089745 Medicago truncatula HOM05D003359 ORTHO05D004472 4.6e-30 135.2 74 81.1
Nn3g16675 Nelumbo nucifera HOM05D003359 ORTHO05D004472 4.6e-30 135.2 80 76.2
ATR0824G097 Amborella trichopoda HOM05D003359 ORTHO05D004472 6.0e-30 134.8 77 79.2
ECA233G4229 Erigeron canadensis HOM05D003359 ORTHO05D004472 6.0e-30 134.8 89 71.9
Eucgr.H02479 Eucalyptus grandis HOM05D003359 ORTHO05D004472 6.0e-30 134.8 89 70.8
Cc11_g15950 Coffea canephora HOM05D003359 ORTHO05D004472 7.9e-30 134.4 80 76.2
FAN07G2501 Fragaria x ananassa HOM05D003359 ORTHO05D004472 7.9e-30 134.4 89 71.9
Medtr8g089740 Medicago truncatula HOM05D003359 ORTHO05D004472 7.9e-30 134.4 80 75.0
THA.LOC104805279 Tarenaya hassleriana HOM05D003359 ORTHO05D004472 7.9e-30 134.4 80 77.5
CARHR147390 Cardamine hirsuta HOM05D003359 ORTHO05D004472 1.0e-29 134.0 80 76.2
SGA_v2.0_scaffold100G29574 Striga asiatica HOM05D003359 ORTHO05D004472 1.0e-29 134.0 80 77.5
Aqoxy5G03712 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 1.3e-29 133.7 80 77.5
HanXRQChr08g0208381 Helianthus annuus HOM05D003359 ORTHO05D004472 1.3e-29 133.7 89 70.8
MD13G1098300 Malus domestica HOM05D003359 ORTHO05D004472 1.3e-29 133.7 89 73.0
Medtr8g089725 Medicago truncatula HOM05D003359 ORTHO05D004472 1.3e-29 133.7 80 73.8
Medtr8g089735 Medicago truncatula HOM05D003359 ORTHO05D004472 1.3e-29 133.7 80 73.8
Sed0021427 Sechium edule HOM05D003359 ORTHO05D004472 1.8e-29 133.3 80 77.5
PGSC0003DMG400011728 Solanum tuberosum HOM05D003359 ORTHO05D004472 1.8e-29 133.3 80 76.2
QL03p057135 Quercus lobata HOM05D003359 ORTHO05D004472 2.3e-29 132.9 95 69.5
Sopen05g008640 Solanum pennellii HOM05D003359 ORTHO05D004472 2.3e-29 132.9 80 75.0
FAN05G1630 Fragaria x ananassa HOM05D003359 ORTHO05D004472 3.9e-29 132.1 78 75.6
FAN05G3491 Fragaria x ananassa HOM05D003359 ORTHO05D004472 3.9e-29 132.1 78 75.6
FAN09G1504 Fragaria x ananassa HOM05D003359 ORTHO05D004472 3.9e-29 132.1 78 75.6
FAN14G4241 Fragaria x ananassa HOM05D003359 ORTHO05D004472 3.9e-29 132.1 78 75.6
FAN14G5485 Fragaria x ananassa HOM05D003359 ORTHO05D004472 3.9e-29 132.1 78 75.6
Solyc05g013720.3 Solanum lycopersicum HOM05D003359 ORTHO05D004472 3.9e-29 132.1 80 75.0
SEGI_05831 Sequoiadendron giganteum HOM05D003359 ORTHO05D004472 5.1e-29 131.7 75 80.0
FvH4_6g05560 Fragaria vesca HOM05D003359 ORTHO05D004472 8.7e-29 131.0 78 74.4
CDE02G4268 Ceratophyllum demersum HOM05D003359 ORTHO05D004472 1.5e-28 130.2 74 79.7
Lsat_1_v5_gn_8_152721 Lactuca sativa HOM05D003359 ORTHO05D004472 1.5e-28 130.2 89 70.8
MD16G1099400 Malus domestica HOM05D003359 ORTHO05D004472 1.5e-28 130.2 89 70.8
Potri.010G048400 Populus trichocarpa HOM05D003359 ORTHO05D004472 2.5e-28 129.4 89 68.5
TWI36G0326 Tripterygium wilfordii HOM05D003359 ORTHO05D004472 4.3e-28 128.6 80 73.8
Potri.010G048300 Populus trichocarpa HOM05D003359 ORTHO05D004472 7.4e-28 127.9 89 66.3
RcHm_v2.0_Chr3g0454341 Rosa chinensis HOM05D003359 ORTHO05D004472 7.4e-28 127.9 78 75.6
Ciclev10033489m.g Citrus clementina HOM05D003359 ORTHO05D004472 1.3e-27 127.1 79 73.4
DCAR_029363 Daucus carota HOM05D003359 ORTHO05D004472 1.6e-27 126.7 80 75.0
TWI36G1577 Tripterygium wilfordii HOM05D003359 ORTHO05D004472 2.1e-27 126.3 80 72.5
Potri.008G185300 Populus trichocarpa HOM05D003359 ORTHO05D004472 2.8e-27 125.9 89 66.3
Glyma.14G049900 Glycine max HOM05D003359 ORTHO05D004472 1.1e-26 124.0 77 72.7
Sabra10G0020500 Salix brachista HOM05D003359 ORTHO05D006537 1.1e-26 124.0 83 68.7
Phvul.008G214500 Phaseolus vulgaris HOM05D003359 ORTHO05D004472 1.4e-26 123.6 86 66.3
LjContig00029g0017310 Lotus japonicus HOM05D003359 ORTHO05D004472 2.4e-26 122.9 87 69.0
MD13G1098400 Malus domestica HOM05D003359 ORTHO05D004472 3.1e-26 122.5 87 67.8
PSO067G0007 Papaver somniferum HOM05D003359 ORTHO05D004472 4.0e-26 122.1 80 71.2
Ciclev10003125m.g Citrus clementina HOM05D003359 ORTHO05D004472 5.3e-26 121.7 79 72.2
AagrBONN_evm.TU.Sc2ySwM_362.590 Anthoceros agrestis HOM05D003359 ORTHO05D004472 5.8e-25 118.2 73 75.3
SMO164G0149 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 1.7e-24 116.7 73 68.5
VMungo0647G2422 Vigna mungo HOM05D003359 ORTHO05D000417 5.0e-24 115.2 78 67.9
ATR0824G255 Amborella trichopoda HOM05D003359 ORTHO05D004472 1.1e-23 114.0 83 62.7
SMO356G0596 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 1.9e-23 113.2 73 69.9
Glyma.02G267700 Glycine max HOM05D003359 ORTHO05D004472 2.5e-23 112.8 63 77.8
SEGI_37368 Sequoiadendron giganteum HOM05D003359 ORTHO05D004472 2.5e-23 112.8 84 61.9
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 7.1e-23 111.3 76 65.8
SEGI_30194 Sequoiadendron giganteum HOM05D003359 ORTHO05D004472 7.1e-23 111.3 90 57.8
Lalb_Chr04g0250081 Lupinus albus HOM05D003359 ORTHO05D004472 2.1e-22 109.8 79 67.1
Lalb_Chr04g0250091 Lupinus albus HOM05D003359 ORTHO05D004472 2.1e-22 109.8 73 69.9
Pp3c11_18080 Physcomitrium patens HOM05D003359 ORTHO05D004472 3.5e-22 109.0 73 71.2
HPP92_023372 Vanilla planifolia HOM05D003359 ORTHO05D004472 1.3e-21 107.1 78 59.0
Lalb_Chr04g0250041 Lupinus albus HOM05D003359 ORTHO05D004472 2.3e-21 106.3 67 71.6
Lalb_Chr04g0250061 Lupinus albus HOM05D003359 ORTHO05D004472 2.3e-21 106.3 67 71.6
HPP92_023360 Vanilla planifolia HOM05D003359 ORTHO05D004472 3.9e-21 105.5 149 40.3
HPP92_023373 Vanilla planifolia HOM05D003359 ORTHO05D004472 5.1e-21 105.1 78 57.7
AagrBONN_evm.TU.Sc2ySwM_228.5836 Anthoceros agrestis HOM05D003359 ORTHO05D004472 1.1e-20 104.0 72 62.5
Mapoly0033s0125 Marchantia polymorpha HOM05D003359 ORTHO05D004472 1.1e-20 104.0 76 61.8
Os01g0518500 Oryza sativa ssp. japonica HOM05D003359 ORTHO05D004472 1.1e-20 104.0 74 64.9
SMO238G0039 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 4.3e-20 102.1 67 67.2
Mapoly0016s0175 Marchantia polymorpha HOM05D003359 ORTHO05D004472 4.8e-19 98.6 73 61.6
Zm00001eb409230 Zea mays HOM05D003359 ORTHO05D004472 1.4e-18 97.1 65 66.2
SMO147G0306 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 5.0e-16 88.6 72 58.3
PSO017G1803 Papaver somniferum HOM05D003359 ORTHO05D004472 7.2e-15 84.7 46 87.0
QL03p057108 Quercus lobata HOM05D003359 ORTHO05D004472 4.6e-14 82.0 63 63.5
QL03p057155 Quercus lobata HOM05D003359 ORTHO05D004472 4.6e-14 82.0 63 63.5
PSO017G3539 Papaver somniferum HOM05D003359 ORTHO05D004472 1.3e-08 63.9 97 43.3
Sabra08G0140300 Salix brachista HOM05D003359 ORTHO05D006537 3.2e-07 59.3 80 42.5
Glyma.02G267600 Glycine max HOM05D003359 ORTHO05D019577 4.2e-07 58.9 32 78.1


User provided reference genes

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