Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01988 Aquilegia oxysepala HOM05D000242 ORTHO05D077365 7.4e-25 116.3 55 100.0
Duzib147G0149 Durio zibethinus HOM05D000242 ORTHO05D000700 1.4e-07 58.9 40 70.0
CsaV3_6G047730 Cucumis sativus L. HOM05D000242 ORTHO05D000700 1.8e-07 58.5 41 68.3
Aqoxy6G01786 Aquilegia oxysepala HOM05D000242 ORTHO05D000700 2.4e-07 58.2 40 70.0
Dinv08533 Davidia involucrata HOM05D000242 ORTHO05D000700 3.1e-07 57.8 40 65.0
Haze_01797 Corylus avellana HOM05D000242 ORTHO05D000700 5.3e-07 57.0 40 67.5
QL02p099683 Quercus lobata HOM05D000242 ORTHO05D000700 5.3e-07 57.0 40 67.5
Sed0016284 Sechium edule HOM05D000242 ORTHO05D000700 5.3e-07 57.0 40 67.5
Hma1.2p1_0552F.1_g177600 Hydrangea macrophylla HOM05D000242 ORTHO05D000700 6.9e-07 56.6 40 67.5
arahy.Tifrunner.gnm1.ann1.62YWNW Arachis hypogaea HOM05D000242 ORTHO05D000700 9.0e-07 56.2 40 67.5
arahy.Tifrunner.gnm1.ann1.A4EZ90 Arachis hypogaea HOM05D000242 ORTHO05D000700 9.0e-07 56.2 40 67.5
CiPaw.06G145300 Carya illinoinensis HOM05D000242 ORTHO05D000700 9.0e-07 56.2 40 67.5
ClCG01G020780 Citrullus lanatus HOM05D000242 ORTHO05D000700 9.0e-07 56.2 41 63.4
CARHR087000 Cardamine hirsuta HOM05D000242 ORTHO05D000700 1.2e-06 55.8 40 67.5
CARHR151150 Cardamine hirsuta HOM05D000242 ORTHO05D000700 1.2e-06 55.8 40 67.5
COL.COLO4_22526 Corchorus olitorius HOM05D000242 ORTHO05D000700 1.2e-06 55.8 40 65.0
Thhalv10021149m.g Eutrema salsugineum HOM05D000242 ORTHO05D000700 1.2e-06 55.8 40 67.5
Hma1.2p1_0552F.1_g177590 Hydrangea macrophylla HOM05D000242 ORTHO05D000700 1.2e-06 55.8 40 65.0
Haze_01773 Corylus avellana HOM05D000242 ORTHO05D000700 1.5e-06 55.5 43 65.1
Haze_01775 Corylus avellana HOM05D000242 ORTHO05D000700 1.5e-06 55.5 43 65.1
Gohir.D11G177500 Gossypium hirsutum HOM05D000242 ORTHO05D000700 1.5e-06 55.5 40 65.0
MBI05_g22676_MAGBIO Magnolia biondii HOM05D000242 ORTHO05D000700 1.5e-06 55.5 40 65.0
EL10Ac1g01063 Beta vulgaris HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 65.0
BcaC05g29261 Brassica carinata HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 65.0
A05p36960 Brassica napus HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 65.0
C05p55410 Brassica napus HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 65.0
BraA05t22496Z Brassica rapa HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 65.0
COL.COLO4_22424 Corchorus olitorius HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 65.0
MBI08_g04933_MAGBIO Magnolia biondii HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 65.0
Os05g0399300 Oryza sativa ssp. japonica HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 65.0
Os05g0399400 Oryza sativa ssp. japonica HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 67.5
Sed0006062 Sechium edule HOM05D000242 ORTHO05D000700 2.0e-06 55.1 40 65.0
BolC5t34207H Brassica oleracea HOM05D000242 ORTHO05D000700 2.6e-06 54.7 40 65.0
Cfa005501 Carpinus fangiana HOM05D000242 ORTHO05D000700 2.6e-06 54.7 40 65.0
Cfa023498 Carpinus fangiana HOM05D000242 ORTHO05D000700 2.6e-06 54.7 40 65.0
FvH4_1g10660 Fragaria vesca HOM05D000242 ORTHO05D000700 2.6e-06 54.7 40 62.5
FAN28G2400 Fragaria x ananassa HOM05D000242 ORTHO05D000700 2.6e-06 54.7 40 62.5
Hma1.2p1_0552F.1_g177610 Hydrangea macrophylla HOM05D000242 ORTHO05D000700 2.6e-06 54.7 40 65.0
AL3G24130 Arabidopsis lyrata HOM05D000242 ORTHO05D000700 3.4e-06 54.3 40 65.0
AT3G12500 Arabidopsis thaliana HOM05D000242 ORTHO05D000700 3.4e-06 54.3 40 65.0
Carub.0003s1183 Capsella rubella HOM05D000242 ORTHO05D000700 3.4e-06 54.3 40 65.0
ClCG01G020800 Citrullus lanatus HOM05D000242 ORTHO05D000700 3.4e-06 54.3 40 62.5
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 3.4e-06 54.3 38 71.1
arahy.Tifrunner.gnm1.ann1.AK92GL Arachis hypogaea HOM05D000242 ORTHO05D000700 4.5e-06 53.9 40 62.5
arahy.Tifrunner.gnm1.ann1.DTFP0P Arachis hypogaea HOM05D000242 ORTHO05D000700 4.5e-06 53.9 40 62.5
CSS0008386 Camellia sinensis var. sinensis HOM05D000242 ORTHO05D000700 4.5e-06 53.9 40 62.5
CiPaw.05G050500 Carya illinoinensis HOM05D000242 ORTHO05D000700 4.5e-06 53.9 40 62.5
CiPaw.06G144900 Carya illinoinensis HOM05D000242 ORTHO05D000700 4.5e-06 53.9 40 62.5
Haze_01777 Corylus avellana HOM05D000242 ORTHO05D000700 4.5e-06 53.9 38 68.4
MELO3C007962.2 Cucumis melo HOM05D000242 ORTHO05D000700 4.5e-06 53.9 40 62.5
FAN23G1022 Fragaria x ananassa HOM05D000242 ORTHO05D000700 4.5e-06 53.9 40 62.5
Lsat_1_v5_gn_8_111541 Lactuca sativa HOM05D000242 ORTHO05D000700 4.5e-06 53.9 40 65.0
BcaB06g25534 Brassica carinata HOM05D000242 ORTHO05D000700 5.9e-06 53.5 40 65.0
Cfa014933 Carpinus fangiana HOM05D000242 ORTHO05D000700 5.9e-06 53.5 40 62.5
MELO3C007961.2 Cucumis melo HOM05D000242 ORTHO05D000700 5.9e-06 53.5 40 62.5
Dinv41893 Davidia involucrata HOM05D000242 ORTHO05D000700 5.9e-06 53.5 40 62.5
Gohir.A11G170400 Gossypium hirsutum HOM05D000242 ORTHO05D000700 5.9e-06 53.5 40 62.5
MD02G1120300 Malus domestica HOM05D000242 ORTHO05D000700 5.9e-06 53.5 40 62.5
QL02p099615 Quercus lobata HOM05D000242 ORTHO05D000700 5.9e-06 53.5 40 65.0
RcHm_v2.0_Chr2g0097821 Rosa chinensis HOM05D000242 ORTHO05D000700 5.9e-06 53.5 40 62.5
ATR0661G037 Amborella trichopoda HOM05D000242 ORTHO05D000700 7.7e-06 53.1 40 62.5
ATR0661G334 Amborella trichopoda HOM05D000242 ORTHO05D000700 7.7e-06 53.1 40 62.5
ClCG01G020770 Citrullus lanatus HOM05D000242 ORTHO05D000700 7.7e-06 53.1 38 65.8
Haze_01792 Corylus avellana HOM05D000242 ORTHO05D000700 7.7e-06 53.1 38 68.4
MBI08_g04320_MAGBIO Magnolia biondii HOM05D000242 ORTHO05D000700 7.7e-06 53.1 40 65.0
Sabra07G0050500 Salix brachista HOM05D000242 ORTHO05D000700 7.7e-06 53.1 40 65.0
Sopen10g025610 Solanum pennellii HOM05D000242 ORTHO05D000700 7.7e-06 53.1 40 65.0
THA.LOC104824946 Tarenaya hassleriana HOM05D000242 ORTHO05D000700 7.7e-06 53.1 40 62.5
Haze_01772 Corylus avellana HOM05D000242 ORTHO05D000700 1.0e-05 52.8 40 62.5
Haze_01774 Corylus avellana HOM05D000242 ORTHO05D000700 1.0e-05 52.8 40 62.5
Duzib132G0831 Durio zibethinus HOM05D000242 ORTHO05D000700 1.0e-05 52.8 42 66.7
MBI08_g04318_MAGBIO Magnolia biondii HOM05D000242 ORTHO05D000700 1.0e-05 52.8 38 68.4
Manes.04G067520 Manihot esculenta HOM05D000242 ORTHO05D000700 1.0e-05 52.8 40 60.0
Os03g0418000 Oryza sativa ssp. japonica HOM05D000242 ORTHO05D000700 1.0e-05 52.8 40 62.5
Os06g0726200 Oryza sativa ssp. japonica HOM05D000242 ORTHO05D000700 1.0e-05 52.8 40 60.0
Prupe.7G178500 Prunus persica HOM05D000242 ORTHO05D000700 1.0e-05 52.8 40 60.0
QL02p099672 Quercus lobata HOM05D000242 ORTHO05D000700 1.0e-05 52.8 40 62.5
Thecc.01G008200 Theobroma cacao HOM05D000242 ORTHO05D000700 1.0e-05 52.8 40 62.5
VMungo0251G0982 Vigna mungo HOM05D000242 ORTHO05D000700 1.0e-05 52.8 40 60.0


User provided reference genes

Program Settings