Gene: Sopen10g025610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g025610
  • Transcript Identifier Sopen10g025610.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 68358625-68359769 : negative

Gene Family Information

  • ID HOM05D000242
  • #Genes/#Species 1731/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g025610.1

Descriptions

  • Description Endochitinase 1 precursor (EC 3.2.1.14) (Fragment) - Solanum tuberosum (Potato), encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | basic chitinase (HCHIB) | FUNCTIONS IN: chitinase activity | INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site , Glycoside hydrolase, family 19 , Chitin-binding, type 1 , Glycoside hydrolase, family 19, catalytic | BEST Arabidopsis thaliana protein match is: Chitinase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006032
IEA
InterProchitin catabolic process
GO:0016998
IEA
InterProcell wall macromolecule catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004568
IEA
InterProchitinase activity
GO:0008061
IEA
InterProchitin binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016283 Glycoside hydrolase, family 19
IPR001002 Chitin-binding, type 1
IPR036861 Endochitinase-like superfamily
IPR023346 Lysozyme-like domain superfamily
IPR000726 Glycoside hydrolase, family 19, catalytic
Mapman id Description
35.1 not assigned.annotated