Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 9.3e-262 906.4 468 100.0
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 6.3e-125 451.8 470 54.0
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.5e-123 447.2 474 52.5
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 4.5e-123 445.7 454 55.1
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 5.0e-122 442.2 453 53.4
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 2.2e-117 426.8 468 50.9
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 2.2e-117 426.8 471 50.5
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 4.8e-117 425.6 470 51.7
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 5.3e-116 422.2 466 50.4
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 1.6e-115 420.6 471 51.0
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 2.5e-113 413.3 471 51.4
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 4.2e-113 412.5 468 50.4
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 5.5e-113 412.1 463 50.1
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 2.7e-112 409.8 471 50.1
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 3.6e-112 409.5 467 49.5
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.0e-111 407.9 468 49.4
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 8.8e-111 404.8 464 49.6
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 1.2e-110 404.4 461 50.1
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 7.5e-110 401.7 474 48.9
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 9.8e-110 401.4 469 49.7
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 2.7e-107 393.3 463 47.7
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.5e-107 392.5 462 49.1
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.9e-107 392.1 471 48.8
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.0e-106 391.3 484 47.5
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 3.8e-106 389.4 478 47.7
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 5.0e-106 389.0 466 48.1
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.0e-103 381.3 467 47.5
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 1.4e-103 380.9 465 47.1
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 2.6e-102 376.7 462 47.0
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 5.7e-102 375.6 464 47.2
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.3e-101 374.4 462 48.1
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 6.3e-101 372.1 473 45.9
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 8.3e-101 371.7 469 46.3
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.4e-100 370.2 467 44.8
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 2.4e-100 370.2 466 47.2
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 1.2e-99 367.9 463 44.9
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 5.9e-99 365.5 466 46.8
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 5.9e-99 365.5 412 49.8
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 7.7e-99 365.2 466 44.0
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.0e-98 364.8 468 43.8
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.7e-98 364.0 467 45.0
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 3.8e-98 362.8 474 44.9
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 5.0e-98 362.5 473 43.6
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 1.5e-97 360.9 470 43.6
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 3.3e-97 359.8 470 43.2
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 9.5e-97 358.2 473 44.2
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 4.7e-96 355.9 470 44.5
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 6.1e-96 355.5 465 43.9
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 6.1e-96 355.5 336 56.2
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 8.0e-96 355.1 464 43.5
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.0e-95 354.8 449 47.2
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 1.8e-95 354.0 470 44.7
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 3.0e-95 353.2 473 43.8
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 5.2e-95 352.4 470 44.5
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.5e-94 350.9 470 42.6
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 3.4e-94 349.7 495 43.4
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 5.7e-94 349.0 470 43.6
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 7.5e-94 348.6 464 42.9
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 9.8e-94 348.2 463 41.5
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.3e-93 347.8 470 43.4
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.7e-93 347.4 470 43.4
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 3.7e-93 346.3 457 42.0
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 8.3e-93 345.1 473 42.7
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 8.3e-93 345.1 441 45.1
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.1e-92 344.7 470 43.8
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.4e-92 344.4 470 43.0
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.8e-92 344.0 469 41.2
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 4.1e-92 342.8 465 42.8
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 5.4e-92 342.4 470 43.6
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 5.4e-92 342.4 441 45.4
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 7.0e-92 342.0 462 43.9
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 2.0e-91 340.5 453 43.5
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 3.5e-91 339.7 470 42.1
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 4.6e-91 339.3 470 43.0
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 6.6e-90 335.5 442 43.7
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 1.9e-89 334.0 470 41.9
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 4.3e-89 332.8 455 42.6
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 9.5e-89 331.6 487 41.7
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 9.5e-89 331.6 470 41.7
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 1.6e-88 330.9 445 44.3
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 2.1e-88 330.5 466 40.8
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 2.8e-88 330.1 457 42.0
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 1.0e-87 328.2 466 43.1
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 8.9e-87 325.1 473 44.6
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 2.9e-85 320.1 468 43.2
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 7.0e-84 315.5 422 42.7
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 6.6e-82 308.9 456 43.0
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 9.5e-81 305.1 436 41.7
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.4e-79 301.2 413 43.1
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 4.1e-76 289.7 442 40.3
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 5.4e-76 289.3 303 52.8
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 2.7e-75 287.0 463 40.2
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 6.6e-74 282.3 341 48.4
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.4e-71 274.6 348 47.1
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.2e-67 261.5 301 47.5
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.6e-64 250.0 324 46.6
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 8.1e-64 248.8 464 36.4
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 8.4e-61 238.8 300 46.0
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 1.0e-42 178.7 368 34.5
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 5.6e-41 172.9 183 49.2
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 4.1e-31 140.2 157 44.6
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 2.2e-29 134.4 489 25.2
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.1e-28 132.1 120 53.3
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 9.3e-28 129.0 120 52.5
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 9.3e-28 129.0 120 52.5
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 3.9e-26 123.6 223 36.8
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 5.1e-26 123.2 256 35.2
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-21 108.2 119 47.1
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 5.0e-21 106.7 128 46.9
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 6.5e-21 106.3 85 67.1
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 8.5e-21 105.9 160 36.2
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 8.5e-21 105.9 160 36.2
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 8.5e-21 105.9 309 28.8
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 3.0e-18 97.4 135 40.7
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.5e-17 94.4 121 44.6
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.3e-16 92.0 406 24.4
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 4.5e-14 83.6 74 55.4
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 5.0e-13 80.1 78 51.3
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 9.4e-12 75.9 462 22.3
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 1.1e-09 68.9 118 33.9
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 9.7e-09 65.9 114 32.5
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 2.8e-08 64.3 55 58.2
RcHm_v2.0_Chr3g0477111 Rosa chinensis HOM05D006143 ORTHO05D007587 4.5e-06 57.0 36 72.2


User provided reference genes

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