Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04330 Aquilegia oxysepala HOM05D007347 ORTHO05D009296 1.4e-113 414.5 589 100.0
MBI03_g44527_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 3.9e-55 220.3 173 63.6
TAR371G0226 Trochodendron aralioides HOM05D007347 ORTHO05D009296 1.5e-54 218.4 166 66.3
TAR629G3514 Trochodendron aralioides HOM05D007347 ORTHO05D009296 1.5e-54 218.4 166 66.3
PSO782G5207 Papaver somniferum HOM05D007347 ORTHO05D009296 5.6e-54 216.5 174 64.4
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 9.5e-54 215.7 174 63.2
CSS0000287 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 6.2e-53 213.0 174 62.1
CSS0049471 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 6.2e-53 213.0 174 62.1
Nn3g18549 Nelumbo nucifera HOM05D007347 ORTHO05D009296 2.4e-52 211.1 171 61.4
Actinidia18106 Actinidia chinensis HOM05D007347 ORTHO05D009296 9.2e-49 199.1 162 61.7
QL06p007153 Quercus lobata HOM05D007347 ORTHO05D009296 1.3e-47 195.3 178 56.7
Cfa007995 Carpinus fangiana HOM05D007347 ORTHO05D009296 2.3e-47 194.5 177 55.9
CiPaw.03G007800 Carya illinoinensis HOM05D007347 ORTHO05D009296 2.3e-47 194.5 166 59.0
GSVIVG01036486001 Vitis vinifera HOM05D007347 ORTHO05D009296 3.0e-47 194.1 161 59.0
Cc07_g04830 Coffea canephora HOM05D007347 ORTHO05D009296 3.9e-47 193.7 161 58.4
ATR0124G035 Amborella trichopoda HOM05D007347 ORTHO05D009296 5.1e-47 193.4 169 53.3
MSTRG.24902 Avicennia marina HOM05D007347 ORTHO05D009296 1.5e-46 191.8 162 58.0
Haze_14081 Corylus avellana HOM05D007347 ORTHO05D009296 1.9e-46 191.4 177 56.5
RcHm_v2.0_Chr2g0114451 Rosa chinensis HOM05D007347 ORTHO05D009296 1.9e-46 191.4 176 56.8
RcHm_v2.0_Chr6g0269561 Rosa chinensis HOM05D007347 ORTHO05D009296 1.9e-46 191.4 176 56.8
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 3.3e-46 190.7 164 59.8
Hma1.2p1_1364F.1_g278380 Hydrangea macrophylla HOM05D007347 ORTHO05D009296 7.3e-46 189.5 162 58.0
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 9.6e-46 189.1 174 52.3
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 2.1e-45 188.0 162 56.2
Prupe.6G186200 Prunus persica HOM05D007347 ORTHO05D009296 2.1e-45 188.0 176 55.1
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 3.6e-45 187.2 174 52.9
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 3.6e-45 187.2 174 52.3
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 4.8e-45 186.8 164 57.3
FAN23G0930 Fragaria x ananassa HOM05D007347 ORTHO05D009296 4.8e-45 186.8 164 57.3
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 4.8e-45 186.8 164 57.3
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 6.2e-45 186.4 174 52.3
Gohir.A03G183300 Gossypium hirsutum HOM05D007347 ORTHO05D009296 6.2e-45 186.4 165 58.8
Gohir.D02G204900 Gossypium hirsutum HOM05D007347 ORTHO05D009296 6.2e-45 186.4 165 58.8
Gorai.005G232200 Gossypium raimondii HOM05D007347 ORTHO05D009296 6.2e-45 186.4 165 58.8
Migut.H00560 Erythranthe guttata HOM05D007347 ORTHO05D009296 8.1e-45 186.0 162 56.8
FvH4_1g20970 Fragaria vesca HOM05D007347 ORTHO05D009296 1.1e-44 185.7 164 56.7
HanXRQChr14g0448021 Helianthus annuus HOM05D007347 ORTHO05D009296 1.4e-44 185.3 177 57.6
Sc10g0001490 Simmondsia chinensis HOM05D007347 ORTHO05D009296 1.8e-44 184.9 167 58.1
Phvul.011G207300 Phaseolus vulgaris HOM05D007347 ORTHO05D009296 2.4e-44 184.5 164 55.5
FAN19G1358 Fragaria x ananassa HOM05D007347 ORTHO05D009296 4.0e-44 183.7 164 56.7
ClCG11G001180 Citrullus lanatus HOM05D007347 ORTHO05D009296 9.0e-44 182.6 175 53.7
Cpa.g.sc16.131 Carica papaya HOM05D007347 ORTHO05D009296 1.5e-43 181.8 174 55.2
TPR.G30433 Trifolium pratense HOM05D007347 ORTHO05D009296 1.5e-43 181.8 168 52.4
Glyma.15G236300 Glycine max HOM05D007347 ORTHO05D009296 2.0e-43 181.4 165 57.0
VMungo1127G1072 Vigna mungo HOM05D007347 ORTHO05D009296 2.0e-43 181.4 174 53.4
Ciclev10011342m.g Citrus clementina HOM05D007347 ORTHO05D009296 2.6e-43 181.0 176 54.0
Duzib138G0808 Durio zibethinus HOM05D007347 ORTHO05D009296 2.6e-43 181.0 165 57.6
CsaV3_5G013240 Cucumis sativus L. HOM05D007347 ORTHO05D009296 3.4e-43 180.6 161 57.1
Eucgr.I02100 Eucalyptus grandis HOM05D007347 ORTHO05D009296 4.4e-43 180.3 175 55.4
Glyma.13G197700 Glycine max HOM05D007347 ORTHO05D009296 4.4e-43 180.3 165 55.8
Lsat_1_v5_gn_2_86161 Lactuca sativa HOM05D007347 ORTHO05D009296 5.8e-43 179.9 177 55.4
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 1.7e-42 178.3 161 55.9
Psat4g145840 Pisum sativum HOM05D007347 ORTHO05D009296 2.2e-42 177.9 162 52.5
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 2.9e-42 177.6 176 54.5
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 2.9e-42 177.6 165 56.4
Medtr8g039270 Medicago truncatula HOM05D007347 ORTHO05D009296 3.8e-42 177.2 176 48.9
TWI15G0869 Tripterygium wilfordii HOM05D007347 ORTHO05D009296 3.8e-42 177.2 165 56.4
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 4.9e-42 176.8 160 57.5
AUR62019500 Chenopodium quinoa HOM05D007347 ORTHO05D009296 4.9e-42 176.8 155 56.8
Lalb_Chr19g0132391 Lupinus albus HOM05D007347 ORTHO05D009296 1.9e-41 174.9 167 55.1
Sed0006376 Sechium edule HOM05D007347 ORTHO05D009296 3.2e-41 174.1 175 53.7
SGA_v2.0_scaffold204G41666 Striga asiatica HOM05D007347 ORTHO05D009296 5.4e-41 173.3 170 50.0
SalBow1G8225 Salvia bowleyana HOM05D007347 ORTHO05D009296 2.1e-40 171.4 160 52.5
Lj3g0007423 Lotus japonicus HOM05D007347 ORTHO05D009296 2.7e-40 171.0 164 54.3
Manes.18G103700 Manihot esculenta HOM05D007347 ORTHO05D009296 6.0e-40 169.9 155 56.1
Potri.017G108600 Populus trichocarpa HOM05D007347 ORTHO05D009296 1.1e-38 165.6 181 47.5
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 3.3e-38 164.1 167 53.9
Sabra17G0091200 Salix brachista HOM05D007347 ORTHO05D009296 5.6e-38 163.3 181 47.0
FAN28G0832 Fragaria x ananassa HOM05D007347 ORTHO05D009296 6.2e-37 159.8 142 57.7
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 1.4e-36 158.7 168 52.4
THA.LOC104805542 Tarenaya hassleriana HOM05D007347 ORTHO05D009296 1.6e-32 145.2 185 44.9
Aa31LG9G16920 Aethionema arabicum HOM05D007347 ORTHO05D009296 1.8e-31 141.7 173 43.9
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 8.7e-31 139.4 158 49.4
Thhalv10028323m.g Eutrema salsugineum HOM05D007347 ORTHO05D009296 1.9e-30 138.3 180 42.2
AT5G38730 Arabidopsis thaliana HOM05D007347 ORTHO05D009296 1.3e-29 135.6 180 41.1
A04p11620 Brassica napus HOM05D007347 ORTHO05D009296 1.3e-29 135.6 177 43.5
BcaC02g09666 Brassica carinata HOM05D007347 ORTHO05D009296 1.6e-29 135.2 177 43.5
C04p45350 Brassica napus HOM05D007347 ORTHO05D009296 1.6e-29 135.2 177 43.5
BolC4t26117H Brassica oleracea HOM05D007347 ORTHO05D009296 1.6e-29 135.2 177 43.5
BraA04t16830Z Brassica rapa HOM05D007347 ORTHO05D009296 2.1e-29 134.8 177 42.9
SpUn0124_0020 Schrenkiella parvula HOM05D007347 ORTHO05D009296 2.1e-29 134.8 180 41.7
SpUn0185_0030 Schrenkiella parvula HOM05D007347 ORTHO05D009296 2.1e-29 134.8 180 41.7
MBI03_g13436_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 1.1e-28 132.5 92 71.7
AL7G51690 Arabidopsis lyrata HOM05D007347 ORTHO05D009296 1.4e-28 132.1 180 39.4
Carub.0007s3713 Capsella rubella HOM05D007347 ORTHO05D009296 1.4e-28 132.1 180 40.6
BcaB06g27240 Brassica carinata HOM05D007347 ORTHO05D009296 1.2e-27 129.0 177 40.7
AUR62036136 Chenopodium quinoa HOM05D007347 ORTHO05D009296 4.9e-26 123.6 93 65.6
ECA238G4434 Erigeron canadensis HOM05D007347 ORTHO05D009296 7.1e-25 119.8 93 66.7
Atru.chr10.1870 Acer truncatum HOM05D007347 ORTHO05D009296 1.2e-24 119.0 174 40.8
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 1.8e-23 115.2 93 64.5
Ca_23964_v3 Cicer arietinum L. HOM05D007347 ORTHO05D009296 2.5e-17 94.7 73 60.3
ATR0124G055 Amborella trichopoda HOM05D007347 ORTHO05D009296 4.8e-13 80.5 68 57.4
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 2.4e-12 78.2 63 54.0
COL.COLO4_37044 Corchorus olitorius HOM05D007347 ORTHO05D009296 3.1e-12 77.8 69 52.2
Oeu033427.1 Olea europaea HOM05D007347 ORTHO05D009296 5.3e-12 77.0 68 50.0
DCAR_010986 Daucus carota HOM05D007347 ORTHO05D009296 1.3e-10 72.4 70 45.7
MBI03_g44528_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 2.9e-10 71.2 67 53.7
CDE05G1387 Ceratophyllum demersum HOM05D007347 ORTHO05D009296 1.1e-09 69.3 69 44.9
Duzib133G1060 Durio zibethinus HOM05D006931 ORTHO05D008782 1.1e-09 69.3 162 29.0
Hma1.2p1_2484F.1_g323040 Hydrangea macrophylla HOM05D006931 ORTHO05D008782 1.4e-09 68.9 162 31.5
Gorai.012G149400 Gossypium raimondii HOM05D006931 ORTHO05D008782 1.9e-09 68.6 162 27.2
Cpa.g.sc211.20 Carica papaya HOM05D006931 ORTHO05D008782 3.2e-09 67.8 162 28.4
Gohir.D04G161400 Gossypium hirsutum HOM05D006931 ORTHO05D008782 3.2e-09 67.8 162 27.2
Hma1.2p1_0253F.1_g103010 Hydrangea macrophylla HOM05D006931 ORTHO05D008782 3.2e-09 67.8 162 31.5
Gohir.A04G119800 Gossypium hirsutum HOM05D006931 ORTHO05D008782 5.5e-09 67.0 162 26.5
SGA_v2.0_scaffold4G02364 Striga asiatica HOM05D007347 ORTHO05D009296 5.5e-09 67.0 61 45.9
Rhsim01G0212700 Rhododendron simsii HOM05D006931 ORTHO05D008782 1.2e-08 65.9 162 29.6
Hund04386 Selenicereus undatus HOM05D006931 ORTHO05D008782 1.2e-08 65.9 162 27.2
SEGI_04891 Sequoiadendron giganteum HOM05D006888 ORTHO05D008371 1.2e-08 65.9 164 28.7
Medtr7g090340 Medicago truncatula HOM05D006931 ORTHO05D008782 2.7e-08 64.7 161 28.6
Rhsim06G0175400 Rhododendron simsii HOM05D006931 ORTHO05D008782 2.7e-08 64.7 162 29.0
CSS0032219 Camellia sinensis var. sinensis HOM05D006931 ORTHO05D008782 3.6e-08 64.3 162 29.0
CSS0037608 Camellia sinensis var. sinensis HOM05D006931 ORTHO05D008782 3.6e-08 64.3 162 29.0
SEGI_39034 Sequoiadendron giganteum HOM05D007675 ORTHO05D009699 3.6e-08 64.3 172 24.4
PGSC0003DMG400006142 Solanum tuberosum HOM05D006931 ORTHO05D008782 3.6e-08 64.3 162 27.8
MD17G1115600 Malus domestica HOM05D006931 ORTHO05D008782 4.6e-08 63.9 162 29.0
Nn3g20375 Nelumbo nucifera HOM05D006931 ORTHO05D008782 4.6e-08 63.9 162 29.0
SalBow1G4479 Salvia bowleyana HOM05D006931 ORTHO05D008782 4.6e-08 63.9 163 29.4
CARHR264050 Cardamine hirsuta HOM05D007347 ORTHO05D009296 6.1e-08 63.5 53 54.7
MBI19_g25580_MAGBIO Magnolia biondii HOM05D006931 ORTHO05D008782 6.1e-08 63.5 162 28.4
Thhalv10024897m.g Eutrema salsugineum HOM05D006931 ORTHO05D008782 7.9e-08 63.2 162 27.2
Potri.014G166001 Populus trichocarpa HOM05D006931 ORTHO05D008782 7.9e-08 63.2 162 28.4
Sc07g0001940 Simmondsia chinensis HOM05D006931 ORTHO05D008782 7.9e-08 63.2 162 24.7
MSTRG.10694 Avicennia marina HOM05D006931 ORTHO05D008782 1.0e-07 62.8 164 29.3
Lj3g0013378 Lotus japonicus HOM05D006931 ORTHO05D008782 1.0e-07 62.8 164 31.1
Lj3g0024796 Lotus japonicus HOM05D006931 ORTHO05D008782 1.0e-07 62.8 164 31.1
Dinv26621 Davidia involucrata HOM05D006931 ORTHO05D008782 1.4e-07 62.4 162 27.8
Prupe.3G199000 Prunus persica HOM05D006931 ORTHO05D008782 1.4e-07 62.4 162 28.4
Solyc07g047620.3 Solanum lycopersicum HOM05D006931 ORTHO05D008782 1.4e-07 62.4 162 27.8
Sopen07g024110 Solanum pennellii HOM05D006931 ORTHO05D008782 1.4e-07 62.4 162 27.8
Actinidia09786 Actinidia chinensis HOM05D006931 ORTHO05D008782 1.8e-07 62.0 162 28.4
Carub.0007s1417 Capsella rubella HOM05D006931 ORTHO05D008782 1.8e-07 62.0 162 25.9
Peaxi162Scf00802g00211 Petunia axillaris HOM05D006931 ORTHO05D008782 1.8e-07 62.0 163 27.0
Peaxi162Scf70695g00002 Petunia axillaris HOM05D006931 ORTHO05D008782 1.8e-07 62.0 163 27.0
Hund23024 Selenicereus undatus HOM05D006931 ORTHO05D008782 1.8e-07 62.0 162 25.9
Thecc.01G192500 Theobroma cacao HOM05D006931 ORTHO05D008782 1.8e-07 62.0 162 27.8
BcaC09g52253 Brassica carinata HOM05D006931 ORTHO05D008782 2.3e-07 61.6 164 26.8
Sp7g24650 Schrenkiella parvula HOM05D006931 ORTHO05D008782 2.3e-07 61.6 162 26.5
vmacro12097 Vaccinium macrocarpon HOM05D006931 ORTHO05D008782 2.3e-07 61.6 160 28.1
AL7G26160 Arabidopsis lyrata HOM05D006931 ORTHO05D008782 3.0e-07 61.2 162 24.7
Lsat_1_v5_gn_2_33981 Lactuca sativa HOM05D001522 ORTHO05D008782 3.0e-07 61.2 164 27.4
SEGI_11241 Sequoiadendron giganteum HOM05D007496 ORTHO05D009479 3.0e-07 61.2 163 24.5
Lj8P135T27 Lonicera japonica HOM05D006931 ORTHO05D008782 3.9e-07 60.8 162 27.2
TPR.G8749 Trifolium pratense HOM05D006931 ORTHO05D008782 3.9e-07 60.8 162 28.4
BcaC09g50628 Brassica carinata HOM05D006931 ORTHO05D008782 5.1e-07 60.5 162 25.9
BolC1t02203H Brassica oleracea HOM05D003050 ORTHO05D003513 5.1e-07 60.5 162 25.9
Ciclev10018243m.g Citrus clementina HOM05D006931 ORTHO05D008782 5.1e-07 60.5 162 27.8
FAN05G5053 Fragaria x ananassa HOM05D006931 ORTHO05D008782 5.1e-07 60.5 162 26.5
RcHm_v2.0_Chr2g0156201 Rosa chinensis HOM05D006931 ORTHO05D008782 5.1e-07 60.5 162 26.5
C01p22740 Brassica napus HOM05D003050 ORTHO05D003513 6.7e-07 60.1 162 25.9
CANSAT64G0807 Cannabis sativa HOM05D006931 ORTHO05D008782 6.7e-07 60.1 162 26.5
CAN.G805.1 Capsicum annuum HOM05D006931 ORTHO05D008782 6.7e-07 60.1 162 28.4
Sabra14G0126400 Salix brachista HOM05D006931 ORTHO05D008782 6.7e-07 60.1 162 27.2
ATR1159G005 Amborella trichopoda HOM05D006931 ORTHO05D008782 8.8e-07 59.7 162 27.2
AT4G26680 Arabidopsis thaliana HOM05D006931 ORTHO05D008782 8.8e-07 59.7 162 24.7
BraA01t01749Z Brassica rapa HOM05D003050 ORTHO05D003513 8.8e-07 59.7 162 25.9
AUR62003544 Chenopodium quinoa HOM05D006931 ORTHO05D008782 8.8e-07 59.7 166 26.5
Eucgr.G01771 Eucalyptus grandis HOM05D006931 ORTHO05D008782 8.8e-07 59.7 162 25.9
EL10Ac6g15337 Beta vulgaris HOM05D006931 ORTHO05D008782 1.1e-06 59.3 166 26.5
MELO3C025970.2 Cucumis melo HOM05D006931 ORTHO05D008782 1.1e-06 59.3 162 28.4
CsaV3_6G009550 Cucumis sativus L. HOM05D006931 ORTHO05D008782 1.1e-06 59.3 162 28.4
Atru.chr6.3406 Acer truncatum HOM05D006931 ORTHO05D008782 1.5e-06 58.9 161 26.7
Aa31LG5G12250 Aethionema arabicum HOM05D006931 ORTHO05D008782 1.5e-06 58.9 162 25.9
A01p17940 Brassica napus HOM05D003050 ORTHO05D003513 1.5e-06 58.9 162 25.3
TAR629G3292 Trochodendron aralioides HOM05D006931 ORTHO05D008782 1.5e-06 58.9 162 27.2
AUR62017857 Chenopodium quinoa HOM05D006931 ORTHO05D008782 2.0e-06 58.5 166 26.5
FAN02G4040 Fragaria x ananassa HOM05D006931 ORTHO05D008782 2.0e-06 58.5 162 25.9
Cc05_g02580 Coffea canephora HOM05D006931 ORTHO05D008782 2.5e-06 58.2 164 28.7
Nitab4.5_0001774g0100 Nicotiana tabacum HOM05D006931 ORTHO05D008782 2.5e-06 58.2 162 25.3
Psat4g195880 Pisum sativum HOM05D006931 ORTHO05D008782 2.5e-06 58.2 161 28.6
QL04p060976 Quercus lobata HOM05D006931 ORTHO05D008782 2.5e-06 58.2 162 24.7
SGA_v2.0_scaffold204G41677 Striga asiatica HOM05D007347 ORTHO05D009296 2.5e-06 58.2 52 42.3
QL04p061072 Quercus lobata HOM05D006931 ORTHO05D008782 3.3e-06 57.8 162 24.7
CARHR234290 Cardamine hirsuta HOM05D006931 ORTHO05D008782 5.7e-06 57.0 156 25.0
Manes.06G016000 Manihot esculenta HOM05D006931 ORTHO05D008782 7.4e-06 56.6 162 25.3
Sed0019973 Sechium edule HOM05D006931 ORTHO05D008782 7.4e-06 56.6 163 27.0
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 7.4e-06 56.6 162 25.9
Haze_12642 Corylus avellana HOM05D006931 ORTHO05D008782 9.7e-06 56.2 162 24.7


User provided reference genes

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