Gene: AT5G38730

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G38730
  • Transcript Identifier AT5G38730.1
  • Gene Type Coding gene
  • Location Chr5 : 15510901-15512691 : positive

Gene Family Information

  • ID HOM05D007347
  • #Genes/#Species 106/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G38730.1
  • uniprot Q9FKR3

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR033443 Pentacotripeptide-repeat region of PRORP
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated