Gene: Lsat_1_v5_gn_2_33981
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_2_33981
- Transcript Identifier Lsat_1_v5_gn_2_33981.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_2 : 76032139-76041361 : negative
Gene Family Information
- ID HOM05D001522
- #Genes/#Species 417/99
- Phylogenetic origin
- ID ORTHO05D008782
- #Genes/#Species 114/82
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_2_33981.v5
- pacid 38961942
Descriptions
- Description KOG1038 - Mitochondrial/chloroplast DNA-directed RNA polymerase RPO41, provides primers for DNA replication-initiation
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002885 | Pentatricopeptide repeat |
| IPR029262 | DNA-directed RNA polymerase, N-terminal |
| IPR002092 | DNA-directed RNA polymerase, phage-type |
| IPR037159 | DNA-directed RNA polymerase, N-terminal domain superfamily |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| Mapman id | Description |
|---|---|
| 15.6.1.1 | RNA biosynthesis.organelle machinery.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) |