Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 8.4e-63 243.4 115 100.0
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 5.1e-52 207.6 107 91.6
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 4.9e-39 164.5 107 74.8
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 3.8e-31 138.3 109 60.6
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 3.2e-30 135.2 109 59.6
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 7.1e-30 134.0 109 59.6
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 7.1e-30 134.0 109 59.6
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 7.1e-30 134.0 109 59.6
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 1.2e-29 133.3 106 58.5
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.6e-29 131.3 109 56.0
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.6e-29 131.3 109 56.0
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.6e-29 131.3 109 56.0
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 4.6e-29 131.3 109 56.0
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 6.0e-29 131.0 109 56.9
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 6.0e-29 131.0 106 56.6
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 7.9e-29 130.6 109 58.7
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 7.9e-29 130.6 109 58.7
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 1.0e-28 130.2 109 59.6
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.8e-28 129.4 109 55.0
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 2.3e-28 129.0 109 58.7
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.3e-28 129.0 106 56.6
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 2.3e-28 129.0 109 58.7
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 3.0e-28 128.6 109 57.8
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 3.0e-28 128.6 109 56.9
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 3.9e-28 128.3 109 57.8
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 5.1e-28 127.9 106 57.5
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 6.7e-28 127.5 112 52.7
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 6.7e-28 127.5 104 58.7
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 6.7e-28 127.5 109 55.0
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 1.1e-27 126.7 109 58.7
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 1.5e-27 126.3 106 56.6
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 1.5e-27 126.3 109 55.0
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 1.5e-27 126.3 109 56.9
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 1.5e-27 126.3 109 56.9
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 1.9e-27 125.9 109 57.8
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.9e-27 125.9 106 56.6
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 2.5e-27 125.6 109 56.9
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 4.3e-27 124.8 109 57.8
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 4.3e-27 124.8 109 55.0
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 4.3e-27 124.8 109 56.9
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 4.3e-27 124.8 109 55.0
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 4.3e-27 124.8 109 56.9
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 5.7e-27 124.4 106 56.6
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 7.4e-27 124.0 106 54.7
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 9.6e-27 123.6 107 56.1
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 9.6e-27 123.6 106 57.5
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 9.6e-27 123.6 106 53.8
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 9.6e-27 123.6 109 56.0
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 9.6e-27 123.6 109 55.0
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 9.6e-27 123.6 109 56.0
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 9.6e-27 123.6 109 56.9
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 1.3e-26 123.2 109 56.0
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 1.3e-26 123.2 109 56.0
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 1.6e-26 122.9 109 55.0
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 2.1e-26 122.5 106 58.5
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 2.1e-26 122.5 109 56.0
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 2.1e-26 122.5 109 54.1
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 2.1e-26 122.5 109 54.1
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 2.8e-26 122.1 106 55.7
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 2.8e-26 122.1 109 54.1
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 2.8e-26 122.1 109 55.0
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 3.7e-26 121.7 106 55.7
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 3.7e-26 121.7 106 55.7
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 3.7e-26 121.7 109 56.0
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 3.7e-26 121.7 109 54.1
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 4.8e-26 121.3 109 55.0
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 4.8e-26 121.3 106 57.5
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 4.8e-26 121.3 106 55.7
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 6.3e-26 120.9 109 55.0
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 6.3e-26 120.9 109 54.1
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 8.2e-26 120.6 106 54.7
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 8.2e-26 120.6 109 56.0
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 8.2e-26 120.6 113 54.0
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 1.1e-25 120.2 106 55.7
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 1.1e-25 120.2 106 56.6
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 1.1e-25 120.2 109 53.2
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 1.1e-25 120.2 109 56.0
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 1.1e-25 120.2 113 54.9
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 1.4e-25 119.8 109 54.1
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 1.4e-25 119.8 106 54.7
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 1.8e-25 119.4 106 55.7
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 1.8e-25 119.4 106 53.8
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 2.4e-25 119.0 106 53.8
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 2.4e-25 119.0 109 54.1
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 3.1e-25 118.6 109 54.1
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 4.1e-25 118.2 106 55.7
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 4.1e-25 118.2 107 51.4
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 5.3e-25 117.9 106 55.7
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 6.9e-25 117.5 109 52.3
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 6.9e-25 117.5 106 53.8
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 6.9e-25 117.5 109 54.1
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 6.9e-25 117.5 109 54.1
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 6.9e-25 117.5 109 52.3
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 9.0e-25 117.1 106 55.7
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 9.0e-25 117.1 106 55.7
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 1.2e-24 116.7 106 52.8
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 1.2e-24 116.7 106 51.9
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 1.2e-24 116.7 106 51.9
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 1.5e-24 116.3 106 51.9
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 1.5e-24 116.3 106 51.9
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 1.5e-24 116.3 106 54.7
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 1.5e-24 116.3 109 54.1
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 1.5e-24 116.3 109 52.3
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 2.0e-24 115.9 106 52.8
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 2.0e-24 115.9 106 54.7
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 2.0e-24 115.9 106 52.8
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 2.6e-24 115.5 105 55.2
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 3.4e-24 115.2 106 50.9
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 3.4e-24 115.2 106 50.9
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 3.4e-24 115.2 106 50.9
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 3.4e-24 115.2 106 50.9
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 3.4e-24 115.2 106 50.9
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 3.4e-24 115.2 106 53.8
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.4e-24 115.2 109 49.5
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 3.4e-24 115.2 106 50.9
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 3.4e-24 115.2 106 50.9
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 3.4e-24 115.2 109 48.6
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 5.9e-24 114.4 104 51.9
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 7.6e-24 114.0 106 50.0
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 7.6e-24 114.0 113 53.1
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 1.0e-23 113.6 106 51.9
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 1.0e-23 113.6 109 52.3
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 1.0e-23 113.6 107 53.3
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.3e-23 113.2 110 50.0
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 1.3e-23 113.2 106 51.9
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.3e-23 113.2 109 52.3
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 1.3e-23 113.2 109 49.5
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 1.7e-23 112.8 109 48.6
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.7e-23 112.8 109 48.6
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.7e-23 112.8 109 48.6
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 2.9e-23 112.1 106 50.9
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 2.9e-23 112.1 109 52.3
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 5.0e-23 111.3 104 51.0
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 6.5e-23 110.9 106 52.8
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 6.5e-23 110.9 106 52.8
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 6.5e-23 110.9 106 52.8
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.1e-22 110.2 106 51.9
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 1.1e-22 110.2 107 49.5
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 1.4e-22 109.8 106 52.8
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 1.4e-22 109.8 109 51.4
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.9e-22 109.4 109 48.6
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 1.9e-22 109.4 107 47.7
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 1.9e-22 109.4 107 48.6
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.2e-22 108.2 109 48.6
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 7.2e-22 107.5 93 55.9
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 9.3e-22 107.1 107 50.5
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.2e-21 106.7 94 54.3
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 1.6e-21 106.3 95 53.7
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 3.5e-21 105.1 109 47.7
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.9e-21 104.0 87 55.2
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 7.9e-21 104.0 107 48.6
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 1.3e-20 103.2 106 50.0
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 3.0e-20 102.1 85 55.3
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 5.1e-20 101.3 108 45.4
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 1.1e-19 100.1 109 47.7
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 1.1e-19 100.1 117 47.9
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.5e-19 99.0 76 59.2
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 4.3e-19 98.2 106 47.2
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 2.8e-18 95.5 106 46.2
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 4.1e-17 91.7 106 41.5
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 1.0e-12 77.0 104 35.6
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 3.4e-08 62.0 78 44.9


User provided reference genes

Program Settings