Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02855 Aquilegia oxysepala HOM05D000924 ORTHO05D007614 0.0e+00 1550.4 783 100.0
PSO063G1343 Papaver somniferum HOM05D000924 ORTHO05D007614 1.9e-206 723.4 820 51.2
PSO832G0354 Papaver somniferum HOM05D000924 ORTHO05D007614 3.7e-202 709.1 829 51.6
Dinv35096 Davidia involucrata HOM05D000924 ORTHO05D007614 2.7e-197 693.0 756 53.3
CiPaw.03G041700 Carya illinoinensis HOM05D000924 ORTHO05D007614 6.5e-191 671.8 796 50.4
Lj7C596T1 Lonicera japonica HOM05D000924 ORTHO05D007614 7.2e-190 668.3 792 49.1
GSVIVG01032433001 Vitis vinifera HOM05D000924 ORTHO05D007614 3.0e-188 662.9 826 48.9
QL02p075347 Quercus lobata HOM05D000924 ORTHO05D007614 9.1e-185 651.4 824 47.2
Prupe.3G288900 Prunus persica HOM05D000924 ORTHO05D007614 1.5e-184 650.6 799 48.2
Cfa007396 Carpinus fangiana HOM05D000924 ORTHO05D007614 4.2e-182 642.5 796 48.2
MBI16_g05479_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D007614 7.2e-182 641.7 808 48.0
Potri.001G348200 Populus trichocarpa HOM05D000924 ORTHO05D007614 2.6e-179 633.3 802 48.3
Atru.chr6.2351 Acer truncatum HOM05D000924 ORTHO05D007614 3.3e-179 632.9 689 53.6
Haze_14707 Corylus avellana HOM05D000924 ORTHO05D007614 3.7e-178 629.4 737 49.9
Manes.17G114600 Manihot esculenta HOM05D000924 ORTHO05D007614 1.1e-177 627.9 806 47.6
Thecc.04G014600 Theobroma cacao HOM05D000924 ORTHO05D007614 2.4e-177 626.7 801 48.4
Actinidia35761 Actinidia chinensis HOM05D000924 ORTHO05D007614 5.3e-177 625.5 787 48.7
MD09G1029100 Malus domestica HOM05D000924 ORTHO05D007614 1.2e-176 624.4 806 47.1
Sabra16G0227800 Salix brachista HOM05D000924 ORTHO05D007614 3.8e-175 619.4 795 46.4
TWI36G1299 Tripterygium wilfordii HOM05D000924 ORTHO05D007614 1.1e-174 617.8 797 48.1
CANSAT64G1924 Cannabis sativa HOM05D000924 ORTHO05D007614 4.2e-174 615.9 808 46.8
Cpa.g.sc108.48 Carica papaya HOM05D000924 ORTHO05D007614 7.2e-174 615.1 792 47.0
MELO3C021565.2 Cucumis melo HOM05D000924 ORTHO05D007614 1.8e-172 610.5 613 53.8
RcHm_v2.0_Chr2g0172661 Rosa chinensis HOM05D000924 ORTHO05D007614 2.3e-172 610.1 797 46.7
DCAR_021712 Daucus carota HOM05D000924 ORTHO05D007614 5.2e-172 609.0 653 53.1
Duzib147G1237 Durio zibethinus HOM05D000924 ORTHO05D007614 1.7e-170 604.0 802 47.0
Sed0024864 Sechium edule HOM05D000924 ORTHO05D007614 9.1e-169 598.2 611 53.4
FvH4_6g51100 Fragaria vesca HOM05D000924 ORTHO05D007614 2.0e-168 597.0 673 51.1
CsaV3_5G027240 Cucumis sativus L. HOM05D000924 ORTHO05D007614 7.7e-168 595.1 617 53.0
Rhsim08G0052100 Rhododendron simsii HOM05D000924 ORTHO05D007614 1.7e-167 594.0 681 49.9
Ca_03851_v3 Cicer arietinum L. HOM05D000924 ORTHO05D007614 3.8e-167 592.8 799 45.8
Medtr7g075463 Medicago truncatula HOM05D000924 ORTHO05D007614 1.9e-166 590.5 813 44.4
Oeu057052.1 Olea europaea HOM05D000924 ORTHO05D007614 1.9e-166 590.5 640 51.6
Lj1g0013932 Lotus japonicus HOM05D000924 ORTHO05D007614 6.1e-165 585.5 649 50.8
Migut.L01012 Erythranthe guttata HOM05D000924 ORTHO05D007614 4.0e-164 582.8 640 51.2
Glyma.16G072300 Glycine max HOM05D000924 ORTHO05D007614 1.2e-163 581.3 800 44.9
Thhalv10003551m.g Eutrema salsugineum HOM05D000924 ORTHO05D007614 1.3e-162 577.8 617 52.0
Psat3g114520 Pisum sativum HOM05D000924 ORTHO05D007614 1.3e-162 577.8 680 48.7
ECA232G4622 Erigeron canadensis HOM05D000924 ORTHO05D007614 2.2e-162 577.0 625 50.6
Gohir.D04G056500 Gossypium hirsutum HOM05D000924 ORTHO05D007614 1.2e-160 571.2 799 45.3
SalBow8G2728 Salvia bowleyana HOM05D000924 ORTHO05D007614 2.7e-160 570.1 634 49.5
Gorai.012G063400 Gossypium raimondii HOM05D000924 ORTHO05D007614 3.5e-160 569.7 797 45.3
Cc07_g01890 Coffea canephora HOM05D000924 ORTHO05D007614 4.5e-160 569.3 621 50.7
HanXRQChr09g0255061 Helianthus annuus HOM05D000924 ORTHO05D007614 1.0e-159 568.2 643 50.4
SGA_v2.0_scaffold38G15026 Striga asiatica HOM05D000924 ORTHO05D007614 1.0e-159 568.2 564 53.4
ClCG00G002130 Citrullus lanatus HOM05D000924 ORTHO05D007614 2.2e-159 567.0 614 52.4
ClCG09G019150 Citrullus lanatus HOM05D000924 ORTHO05D007614 2.2e-159 567.0 614 52.4
CSS0007254 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D007614 3.8e-159 566.2 668 49.6
Eucgr.J02227 Eucalyptus grandis HOM05D000924 ORTHO05D007614 9.4e-158 561.6 787 44.0
BolC2t11507H Brassica oleracea HOM05D000924 ORTHO05D007614 2.1e-157 560.5 616 50.3
THA.LOC104805379 Tarenaya hassleriana HOM05D000924 ORTHO05D007614 8.0e-157 558.5 637 49.5
FAN05G3590 Fragaria x ananassa HOM05D000924 ORTHO05D007614 1.4e-156 557.8 532 55.8
Phvul.008G156500 Phaseolus vulgaris HOM05D000924 ORTHO05D007614 1.4e-156 557.8 614 51.8
Sopen02g031330 Solanum pennellii HOM05D000924 ORTHO05D007614 5.2e-156 555.8 527 54.8
CARHR149190 Cardamine hirsuta HOM05D000924 ORTHO05D007614 8.8e-156 555.1 618 50.5
PGSC0003DMG402000479 Solanum tuberosum HOM05D000924 ORTHO05D007614 8.8e-156 555.1 545 54.1
Carub.0005s0628 Capsella rubella HOM05D000924 ORTHO05D007614 1.5e-155 554.3 618 50.3
BraA02t08564Z Brassica rapa HOM05D000924 ORTHO05D007614 5.7e-155 552.4 616 50.2
FAN09G2855 Fragaria x ananassa HOM05D000924 ORTHO05D007614 7.5e-155 552.0 670 48.8
Nitab4.5_0002682g0030 Nicotiana tabacum HOM05D000924 ORTHO05D007614 1.7e-154 550.8 628 49.2
A02p35620 Brassica napus HOM05D000924 ORTHO05D007614 2.2e-154 550.4 616 50.0
Sp2g16840 Schrenkiella parvula HOM05D000924 ORTHO05D007614 1.4e-153 547.7 700 46.6
VMungo1383G1882 Vigna mungo HOM05D000924 ORTHO05D007614 1.4e-153 547.7 618 51.5
Gohir.A05G357600 Gossypium hirsutum HOM05D000924 ORTHO05D007614 2.4e-153 547.0 792 44.7
C02p54450 Brassica napus HOM05D000924 ORTHO05D007614 4.1e-153 546.2 616 49.7
ATR1152G105 Amborella trichopoda HOM05D000924 ORTHO05D007614 5.4e-153 545.8 545 52.8
CAN.G1799.14 Capsicum annuum HOM05D000924 ORTHO05D007614 2.0e-152 543.9 791 43.6
AL5G17170 Arabidopsis lyrata HOM05D000924 ORTHO05D007614 4.5e-152 542.7 618 50.2
Solyc02g086580.4 Solanum lycopersicum HOM05D000924 ORTHO05D007614 2.1e-149 533.9 626 49.0
EL10Ac2g04824 Beta vulgaris HOM05D000924 ORTHO05D007614 4.7e-149 532.7 627 50.1
AUR62012245 Chenopodium quinoa HOM05D000924 ORTHO05D007614 2.3e-148 530.4 788 43.3
arahy.Tifrunner.gnm1.ann1.MJ9BA4 Arachis hypogaea HOM05D000924 ORTHO05D007614 8.8e-148 528.5 803 42.2
Ciclev10017496m.g Citrus clementina HOM05D000924 ORTHO05D007614 2.0e-147 527.3 841 41.1
AT3G27730 Arabidopsis thaliana HOM05D000924 ORTHO05D007614 1.7e-146 524.2 620 49.0
arahy.Tifrunner.gnm1.ann1.X9WBFE Arachis hypogaea HOM05D000924 ORTHO05D007614 1.2e-144 518.1 680 46.9
Nitab4.5_0009078g0030 Nicotiana tabacum HOM05D000924 ORTHO05D007614 1.1e-142 511.5 598 48.7
Os02g0617500 Oryza sativa ssp. japonica HOM05D000924 ORTHO05D007614 2.3e-140 503.8 554 49.6
TAR371G1183 Trochodendron aralioides HOM05D000924 ORTHO05D007614 2.3e-140 503.8 349 71.3
HPP92_001298 Vanilla planifolia HOM05D000924 ORTHO05D007614 3.0e-140 503.4 564 48.6
BcaB07g30146 Brassica carinata HOM05D000924 ORTHO05D007614 6.8e-140 502.3 616 47.1
AUR62022876 Chenopodium quinoa HOM05D000924 ORTHO05D007614 1.5e-139 501.1 819 41.1
COL.COLO4_29060 Corchorus olitorius HOM05D000924 ORTHO05D007614 4.9e-138 496.1 623 47.2
Zm00001eb184840 Zea mays HOM05D000924 ORTHO05D007614 5.4e-137 492.7 549 48.5
Nn3g16790 Nelumbo nucifera HOM05D000924 ORTHO05D007614 7.0e-137 492.3 349 69.9
Peaxi162Scf00129g00137 Petunia axillaris HOM05D000924 ORTHO05D007614 2.3e-132 477.2 792 39.8
Peaxi162Scf00304g00136 Petunia axillaris HOM05D000924 ORTHO05D007614 3.7e-130 469.9 792 39.8
SHI06700 Sapria himalayana HOM05D000924 ORTHO05D007614 1.1e-129 468.4 526 50.8
vmacro18269 Vaccinium macrocarpon HOM05D000924 ORTHO05D007614 1.7e-127 461.1 349 65.9
Sc16g0003250 Simmondsia chinensis HOM05D000924 ORTHO05D007614 3.0e-127 460.3 801 38.8
Lsat_1_v5_gn_4_183620 Lactuca sativa HOM05D000924 ORTHO05D007614 3.9e-127 459.9 498 50.6
TPR.G26936 Trifolium pratense HOM05D000924 ORTHO05D007614 8.1e-125 452.2 349 63.6
Nn4g24979 Nelumbo nucifera HOM05D000924 ORTHO05D007614 3.4e-123 446.8 349 64.2
Aa31LG2G4950 Aethionema arabicum HOM05D000924 ORTHO05D007614 3.5e-112 410.2 264 74.2
AagrBONN_evm.TU.Sc2ySwM_228.4433 Anthoceros agrestis HOM05D000924 ORTHO05D007614 3.1e-100 370.5 526 42.2
RcHm_v2.0_Chr2g0089321 Rosa chinensis HOM05D000924 ORTHO05D007614 6.9e-100 369.4 313 61.3
CAN.G1484.1 Capsicum annuum HOM05D000924 ORTHO05D007614 2.4e-97 360.9 244 68.9
unitig_749.g14004 Utricularia gibba HOM05D000924 ORTHO05D007614 7.9e-96 355.9 623 39.5
Pp3c5_3790 Physcomitrium patens HOM05D000924 ORTHO05D007614 7.6e-91 339.3 451 39.7
Mapoly0013s0041 Marchantia polymorpha HOM05D000924 ORTHO05D007614 2.4e-89 334.3 390 45.6
SMO134G0006 Selaginella moellendorffii HOM05D000924 ORTHO05D007614 5.1e-87 326.6 270 54.8
Lalb_Chr10g0093721 Lupinus albus HOM05D000924 ORTHO05D007614 8.7e-87 325.9 203 73.9
Hund13858 Selenicereus undatus HOM05D000924 ORTHO05D007614 6.3e-77 293.1 642 34.7
Lalb_Chr10g0093731 Lupinus albus HOM05D000924 ORTHO05D007614 1.3e-69 268.9 598 35.6
Sc16g0003270 Simmondsia chinensis HOM05D000924 ORTHO05D007614 8.2e-61 239.6 229 55.9
CDE06G2383 Ceratophyllum demersum HOM05D000924 ORTHO05D007614 5.3e-60 236.9 138 77.5
TAR371G0282 Trochodendron aralioides HOM05D037372 ORTHO05D021137 3.1e-52 211.1 402 38.8
Cre10.g446650 Chlamydomonas reinhardtii HOM05D000924 ORTHO05D007614 1.0e-39 169.5 427 31.4
Nn3g16792 Nelumbo nucifera HOM05D037372 ORTHO05D021137 1.9e-33 148.7 386 34.2
MCO09G431 Micromonas commoda HOM05D000924 ORTHO05D007614 1.4e-31 142.5 281 29.2
vmacro18268 Vaccinium macrocarpon HOM05D000924 ORTHO05D021137 1.6e-27 129.0 256 39.5
TPR.G26947 Trifolium pratense HOM05D000924 ORTHO05D007614 4.5e-27 127.5 482 27.8
arahy.Tifrunner.gnm1.ann1.Y95S47 Arachis hypogaea HOM05D000924 ORTHO05D007614 4.0e-23 114.4 72 70.8
Actinidia18722 Actinidia chinensis HOM05D002640 ORTHO05D003231 2.6e-22 111.7 67 76.1
Actinidia18721 Actinidia chinensis HOM05D002639 ORTHO05D003094 7.5e-22 110.2 167 43.1
PRCOL_00003257 Prasinoderma coloniale HOM05D000924 ORTHO05D007614 3.7e-21 107.8 417 24.7
Actinidia13525 Actinidia chinensis HOM05D000924 ORTHO05D057843 1.6e-19 102.4 302 29.8
Actinidia18715 Actinidia chinensis HOM05D000924 ORTHO05D021137 1.5e-17 95.9 217 32.3
Sc16g0003280 Simmondsia chinensis HOM05D000924 ORTHO05D021137 1.2e-16 92.8 422 24.4
Nn4g24978 Nelumbo nucifera HOM05D037372 ORTHO05D021137 2.3e-15 88.6 278 30.2
Lsat_1_v5_gn_8_141500 Lactuca sativa HOM05D000924 ORTHO05D231564 4.9e-13 80.9 65 60.0
Actinidia18716 Actinidia chinensis HOM05D002640 ORTHO05D003231 7.3e-09 67.0 45 66.7
arahy.Tifrunner.gnm1.ann1.GIQ2XV Arachis hypogaea HOM05D000924 ORTHO05D007614 3.4e-06 58.2 37 67.6
arahy.Tifrunner.gnm1.ann1.S3CVLX Arachis hypogaea HOM05D002079 ORTHO05D007614 3.4e-06 58.2 37 67.6
Actinidia18717 Actinidia chinensis HOM05D000924 ORTHO05D057769 7.5e-06 57.0 50 58.0


User provided reference genes

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