Gene: Pp3c5_3790

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_3790
  • Transcript Identifier Pp3c5_3790V3.3
  • Gene Type Coding gene
  • Location Chr05 : 2586985-2596980 : positive

Gene Family Information

  • ID HOM05D000924
  • #Genes/#Species 651/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_3790V3.3
  • pacid 32953626
  • uniprot A0A2K1KIC3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006401
IBA
GOA DatabaseRNA catabolic process
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT3G27730
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT3G27730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003724
IBA
GOA DatabaseRNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os02g0617500
GO:0005694
ISO
PLAZA Integrative Orthologychromosome Os02g0617500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR004179 Sec63 domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
13.3.5.5.1.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.DNA helicase (RCK/MER3)