Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.1e-197 692.2 350 100.0
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.2e-189 666.4 335 100.0
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 9.8e-131 470.7 337 71.8
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 7.3e-126 454.5 338 68.6
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 7.3e-126 454.5 338 68.6
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 2.3e-124 449.5 332 68.1
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 4.0e-124 448.7 339 69.0
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 1.2e-123 447.2 337 68.2
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 1.2e-123 447.2 338 66.6
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 1.3e-122 443.7 336 65.8
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 1.7e-122 443.4 333 68.2
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 1.1e-121 440.7 339 67.3
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 3.2e-121 439.1 338 65.7
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 3.2e-121 439.1 337 66.2
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 5.4e-121 438.3 338 67.5
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 9.2e-121 437.6 337 66.5
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 1.2e-120 437.2 338 67.2
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 1.6e-120 436.8 334 66.2
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 2.0e-120 436.4 338 65.7
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 3.5e-120 435.6 337 67.4
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 7.8e-120 434.5 336 64.9
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 1.0e-119 434.1 332 65.7
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 2.3e-119 433.0 332 66.6
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 2.3e-119 433.0 332 66.3
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 3.9e-119 432.2 338 64.8
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 6.6e-119 431.4 333 66.4
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 8.6e-119 431.0 330 66.7
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 1.1e-118 430.6 336 64.3
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 1.1e-118 430.6 338 66.3
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.5e-118 430.3 341 65.4
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 1.5e-118 430.3 333 66.4
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 2.5e-118 429.5 338 65.1
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 3.3e-118 429.1 335 66.3
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 3.3e-118 429.1 338 66.3
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 5.6e-118 428.3 334 64.7
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 7.3e-118 427.9 339 65.2
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 2.8e-117 426.0 338 64.5
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 3.6e-117 425.6 337 64.4
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 8.0e-117 424.5 335 63.9
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 8.0e-117 424.5 339 64.9
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 1.1e-116 424.1 337 64.1
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 2.3e-116 422.9 337 63.8
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 6.8e-116 421.4 336 66.7
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 2.6e-115 419.5 334 65.9
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 3.4e-115 419.1 336 64.9
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 7.5e-115 417.9 337 62.0
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 9.8e-115 417.5 334 65.3
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 9.8e-115 417.5 338 65.1
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 1.7e-114 416.8 335 65.7
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 4.9e-114 415.2 333 64.3
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 1.4e-113 413.7 332 64.2
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 3.2e-113 412.5 361 61.5
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 7.0e-113 411.4 348 63.2
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 9.2e-113 411.0 337 62.9
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 1.6e-112 410.2 344 64.2
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 4.6e-112 408.7 347 62.5
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 4.6e-112 408.7 328 64.6
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 7.8e-112 407.9 332 64.2
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 3.0e-111 406.0 377 58.4
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 6.6e-111 404.8 332 62.7
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 3.3e-110 402.5 334 64.7
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 6.2e-109 398.3 337 60.8
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 1.4e-108 397.1 332 61.1
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 2.6e-107 392.9 341 59.2
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 2.2e-106 389.8 330 61.5
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 4.1e-105 385.6 332 60.8
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 7.1e-105 384.8 334 62.3
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 9.2e-105 384.4 342 59.6
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 2.5e-102 376.3 323 62.8
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 2.5e-102 376.3 327 62.1
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 1.1e-100 370.9 335 57.6
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 2.6e-99 366.3 335 57.6
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 2.6e-99 366.3 335 57.6
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 5.8e-99 365.2 329 58.1
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 5.8e-99 365.2 329 58.1
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 9.9e-99 364.4 329 58.1
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 2.2e-98 363.2 335 56.1
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 3.2e-97 359.4 333 58.3
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 4.2e-97 359.0 329 58.1
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 7.1e-97 358.2 333 58.0
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 1.2e-96 357.5 331 57.4
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 2.7e-96 356.3 329 56.8
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 3.5e-96 355.9 294 63.6
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 2.3e-95 353.2 333 56.5
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 3.0e-95 352.8 356 54.8
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.5e-94 350.5 331 58.0
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 1.6e-93 347.1 320 57.5
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 2.1e-93 346.7 332 55.7
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 5.3e-92 342.0 347 52.4
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 9.9e-91 337.8 331 52.9
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 1.7e-90 337.0 329 54.7
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 3.2e-89 332.8 329 54.1
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 3.2e-89 332.8 310 57.7
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.1e-88 330.1 298 59.4
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 4.6e-88 328.9 246 69.1
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 3.0e-79 299.7 244 63.5
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.2e-75 287.7 365 45.8
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 9.9e-75 284.6 282 56.7
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 1.6e-72 277.3 336 48.5
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 2.9e-66 256.5 352 43.8
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 2.8e-61 240.0 163 73.6
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 1.1e-60 238.0 470 36.0
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 3.0e-55 219.9 334 40.7
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.3e-53 214.5 340 39.4
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 2.2e-53 213.8 315 40.0
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 1.7e-50 204.1 188 57.4
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 1.2e-48 198.0 150 66.0
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 7.9e-48 195.3 165 63.0
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 5.9e-35 152.5 190 49.5
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 8.5e-34 148.7 147 52.4
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 2.5e-33 147.1 149 50.3
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.2e-32 144.8 163 47.2
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 2.3e-31 140.6 103 67.0
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 1.6e-27 127.9 157 45.9
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 1.4e-23 114.8 81 64.2
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 3.5e-19 100.1 132 43.2
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 7.2e-17 92.4 65 66.2
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 2.8e-16 90.5 73 57.5
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 4.1e-12 76.6 129 41.9
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 3.5e-11 73.6 77 53.2
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 2.3e-10 70.9 57 54.4
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 7.3e-09 65.9 50 68.0
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 2.8e-08 63.9 57 59.6
Dinv43551 Davidia involucrata HOM05D006268 ORTHO05D180404 7.5e-06 55.8 82 42.7


User provided reference genes

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