Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01806 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 9.3e-201 703.4 361 100.0
Aqoxy7G02591 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 5.4e-124 448.4 230 99.1
TAR627G0710 Trochodendron aralioides HOM05D005098 ORTHO05D006646 2.3e-106 389.8 230 83.9
Rhsim10G0081000 Rhododendron simsii HOM05D005098 ORTHO05D006646 2.5e-105 386.3 230 84.8
RhsimUnG0054100 Rhododendron simsii HOM05D005098 ORTHO05D006646 2.5e-105 386.3 230 84.8
Actinidia07581 Actinidia chinensis HOM05D005098 ORTHO05D006646 2.3e-103 379.8 230 81.7
Atru.chr10.1909 Acer truncatum HOM05D005098 ORTHO05D006646 8.9e-103 377.9 230 79.6
Nn1g06591 Nelumbo nucifera HOM05D005098 ORTHO05D006646 8.9e-103 377.9 230 83.5
MD05G1314300 Malus domestica HOM05D005098 ORTHO05D006646 1.5e-102 377.1 230 81.3
QL05p039825 Quercus lobata HOM05D005098 ORTHO05D006646 2.0e-102 376.7 230 81.3
TWI38G1357 Tripterygium wilfordii HOM05D005098 ORTHO05D006646 2.6e-102 376.3 230 80.9
Thecc.06G189900 Theobroma cacao HOM05D005098 ORTHO05D006646 4.4e-102 375.6 242 78.1
CSS0027379 Camellia sinensis var. sinensis HOM05D005098 ORTHO05D006646 5.8e-102 375.2 231 81.4
PSO210G7403 Papaver somniferum HOM05D005098 ORTHO05D006646 2.2e-101 373.2 265 73.6
PSO832G2562 Papaver somniferum HOM05D005098 ORTHO05D006646 4.9e-101 372.1 234 80.3
Prupe.4G044800 Prunus persica HOM05D005098 ORTHO05D006646 4.9e-101 372.1 230 80.4
MD10G1295600 Malus domestica HOM05D005098 ORTHO05D006646 3.2e-100 369.4 230 79.1
arahy.Tifrunner.gnm1.ann1.Q8E5AY Arachis hypogaea HOM05D005098 ORTHO05D006646 4.1e-100 369.0 230 78.7
Manes.17G044000 Manihot esculenta HOM05D005098 ORTHO05D006646 5.4e-100 368.6 230 80.0
Eucgr.E03323 Eucalyptus grandis HOM05D005098 ORTHO05D006646 1.2e-99 367.5 226 81.4
Lalb_Chr16g0383691 Lupinus albus HOM05D005098 ORTHO05D006646 1.6e-99 367.1 230 78.3
Peaxi162Scf00736g00425 Petunia axillaris HOM05D005098 ORTHO05D006646 1.6e-99 367.1 231 77.9
Dinv40543 Davidia involucrata HOM05D005098 ORTHO05D006646 2.1e-99 366.7 271 71.6
RcHm_v2.0_Chr5g0008121 Rosa chinensis HOM05D005098 ORTHO05D006646 3.5e-99 365.9 233 77.3
Eucgr.E03123 Eucalyptus grandis HOM05D005098 ORTHO05D006646 6.0e-99 365.2 228 81.6
FvH4_3g09430 Fragaria vesca HOM05D005098 ORTHO05D006646 7.8e-99 364.8 230 77.4
Solyc02g078440.3 Solanum lycopersicum HOM05D005098 ORTHO05D006646 7.8e-99 364.8 231 77.5
Sopen02g023290 Solanum pennellii HOM05D005098 ORTHO05D006646 7.8e-99 364.8 231 77.5
Gohir.A10G024700 Gossypium hirsutum HOM05D005098 ORTHO05D006646 1.3e-98 364.0 242 75.2
Gorai.011G026700 Gossypium raimondii HOM05D005098 ORTHO05D006646 1.3e-98 364.0 242 75.2
CAN.G1164.12 Capsicum annuum HOM05D005098 ORTHO05D006646 2.3e-98 363.2 231 77.5
Sed0003361 Sechium edule HOM05D005098 ORTHO05D006646 3.0e-98 362.8 230 78.3
CsaV3_6G050060 Cucumis sativus L. HOM05D005098 ORTHO05D006646 6.6e-98 361.7 230 77.8
Oeu017728.1 Olea europaea HOM05D005098 ORTHO05D006646 8.6e-98 361.3 231 77.1
Migut.G00672 Erythranthe guttata HOM05D005098 ORTHO05D006646 1.1e-97 360.9 231 77.9
Duzib209G0004 Durio zibethinus HOM05D005098 ORTHO05D006646 1.5e-97 360.5 230 77.8
MSTRG.2567 Avicennia marina HOM05D005098 ORTHO05D006646 1.9e-97 360.1 231 76.2
Lj7A690T49 Lonicera japonica HOM05D005098 ORTHO05D006646 2.5e-97 359.8 265 70.2
Psat7g112680 Pisum sativum HOM05D005098 ORTHO05D006646 2.5e-97 359.8 230 77.0
Potri.004G041600 Populus trichocarpa HOM05D005098 ORTHO05D006646 2.5e-97 359.8 234 77.4
Sc17g0006240 Simmondsia chinensis HOM05D005098 ORTHO05D006646 2.5e-97 359.8 230 75.7
Lj4g0017402 Lotus japonicus HOM05D005098 ORTHO05D006646 3.3e-97 359.4 230 77.8
Medtr3g072660 Medicago truncatula HOM05D005098 ORTHO05D006646 3.3e-97 359.4 230 76.5
VMungo0647G1277 Vigna mungo HOM05D005098 ORTHO05D006646 3.3e-97 359.4 230 77.4
Medtr4g088935 Medicago truncatula HOM05D005098 ORTHO05D006646 4.3e-97 359.0 230 77.0
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 9.5e-97 357.8 230 77.4
AT4G17020 Arabidopsis thaliana HOM05D005098 ORTHO05D006646 1.2e-96 357.5 242 74.0
CANSAT35G1139 Cannabis sativa HOM05D005098 ORTHO05D006646 1.2e-96 357.5 230 75.7
Os04g0680000 Oryza sativa ssp. japonica HOM05D005098 ORTHO05D006646 1.6e-96 357.1 230 75.2
Glyma.07G195500 Glycine max HOM05D005098 ORTHO05D006646 2.1e-96 356.7 230 76.5
Phvul.002G227900 Phaseolus vulgaris HOM05D005098 ORTHO05D006646 3.6e-96 355.9 230 77.0
CiPaw.09G058200 Carya illinoinensis HOM05D005098 ORTHO05D006646 8.1e-96 354.8 230 77.0
Cc01_g06430 Coffea canephora HOM05D005098 ORTHO05D006646 8.1e-96 354.8 232 76.7
Duzib235G1364 Durio zibethinus HOM05D005098 ORTHO05D006646 1.1e-95 354.4 225 77.8
HanXRQChr17g0560221 Helianthus annuus HOM05D005098 ORTHO05D006646 1.4e-95 354.0 231 75.3
PGR142G2026 Punica granatum HOM05D005098 ORTHO05D006646 1.4e-95 354.0 226 77.9
Aa31LG2G13100 Aethionema arabicum HOM05D005098 ORTHO05D006646 1.8e-95 353.6 230 76.1
Glyma.13G180800 Glycine max HOM05D005098 ORTHO05D006646 1.8e-95 353.6 230 76.1
ATR0680G123 Amborella trichopoda HOM05D005098 ORTHO05D006646 2.3e-95 353.2 247 72.5
AL7G37700 Arabidopsis lyrata HOM05D005098 ORTHO05D006646 2.3e-95 353.2 242 73.6
HPP92_021892 Vanilla planifolia HOM05D005098 ORTHO05D006646 2.3e-95 353.2 230 76.1
EL10Ac8g20363 Beta vulgaris HOM05D005098 ORTHO05D006646 4.0e-95 352.4 230 77.0
BcaNung00134 Brassica carinata HOM05D005098 ORTHO05D006646 6.8e-95 351.7 230 74.3
CARHR223580 Cardamine hirsuta HOM05D005098 ORTHO05D006646 8.9e-95 351.3 242 72.3
Thhalv10025179m.g Eutrema salsugineum HOM05D005098 ORTHO05D006646 1.5e-94 350.5 230 74.8
Sp7g17170 Schrenkiella parvula HOM05D005098 ORTHO05D006646 2.0e-94 350.1 230 74.8
THA.LOC104814462 Tarenaya hassleriana HOM05D005098 ORTHO05D006646 2.0e-94 350.1 265 67.9
Ah.09g237250 Amaranthus hybridus HOM05D005098 ORTHO05D006646 3.4e-94 349.4 230 76.1
Haze_05744 Corylus avellana HOM05D005098 ORTHO05D006646 1.7e-93 347.1 230 76.1
vmacro15900 Vaccinium macrocarpon HOM05D005098 ORTHO05D006646 2.9e-93 346.3 317 61.2
TPR.G12033 Trifolium pratense HOM05D005098 ORTHO05D006646 4.9e-93 345.5 230 74.8
BraA01t01956Z Brassica rapa HOM05D005098 ORTHO05D006646 1.1e-92 344.4 225 74.7
BcaC09g50435 Brassica carinata HOM05D005098 ORTHO05D006646 1.4e-92 344.0 230 73.0
C01p25440 Brassica napus HOM05D005098 ORTHO05D006646 1.4e-92 344.0 230 73.0
BolC1t02496H Brassica oleracea HOM05D005098 ORTHO05D006646 1.4e-92 344.0 230 73.0
A01p20290 Brassica napus HOM05D005098 ORTHO05D006646 3.2e-92 342.8 225 74.2
Carub.0007s2440 Capsella rubella HOM05D005098 ORTHO05D006646 2.7e-91 339.7 242 71.1
Gohir.D10G025400 Gossypium hirsutum HOM05D005098 ORTHO05D006646 6.0e-91 338.6 211 79.6
SalBow3G0169 Salvia bowleyana HOM05D005098 ORTHO05D006646 1.0e-90 337.8 257 66.1
ECA234G2003 Erigeron canadensis HOM05D005098 ORTHO05D006646 1.7e-90 337.0 235 71.9
MBI18_g17000_MAGBIO Magnolia biondii HOM05D005098 ORTHO05D006646 3.0e-90 336.3 211 77.7
DCAR_028090 Daucus carota HOM05D005098 ORTHO05D006646 5.1e-90 335.5 230 73.5
Dinv07544 Davidia involucrata HOM05D005098 ORTHO05D006646 8.6e-90 334.7 202 82.7
Zm00001eb065950 Zea mays HOM05D005098 ORTHO05D006646 8.6e-90 334.7 230 70.9
unitig_736.g22566 Utricularia gibba HOM05D005098 ORTHO05D006646 1.1e-87 327.8 245 69.0
Ciclev10009035m.g Citrus clementina HOM05D005098 ORTHO05D006646 1.8e-87 327.0 202 77.7
SGA_v2.0_scaffold111G31518 Striga asiatica HOM05D005098 ORTHO05D006646 4.2e-84 315.8 237 68.8
FAN21G0237 Fragaria x ananassa HOM05D005098 ORTHO05D006646 7.1e-84 315.1 334 53.0
ClCG01G022890 Citrullus lanatus HOM05D005098 ORTHO05D006646 2.7e-83 313.2 210 73.8
Nitab4.5_0002158g0040 Nicotiana tabacum HOM05D005098 ORTHO05D006646 1.7e-82 310.5 231 69.3
Nitab4.5_0005954g0050 Nicotiana tabacum HOM05D005098 ORTHO05D006646 1.7e-82 310.5 231 69.3
Hund21233 Selenicereus undatus HOM05D005098 ORTHO05D006646 7.3e-81 305.1 334 53.6
Sabra04G0025700 Salix brachista HOM05D005098 ORTHO05D006646 3.6e-80 302.8 233 68.7
Lsat_1_v5_gn_4_52761 Lactuca sativa HOM05D005098 ORTHO05D006646 4.0e-79 299.3 211 71.6
Cpa.g.sc27.58 Carica papaya HOM05D005098 ORTHO05D006646 3.4e-78 296.2 182 79.7
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 4.9e-77 292.4 230 65.2
AUR62014801 Chenopodium quinoa HOM05D005098 ORTHO05D006646 1.4e-76 290.8 202 72.3
FAN11G1498 Fragaria x ananassa HOM05D005098 ORTHO05D006646 1.9e-76 290.4 314 52.9
AUR62016992 Chenopodium quinoa HOM05D005098 ORTHO05D006646 3.8e-69 266.2 182 74.2
Nitab4.5_0000119g0020 Nicotiana tabacum HOM05D005098 ORTHO05D006646 7.1e-68 261.9 251 56.2
COL.COLO4_32259 Corchorus olitorius HOM05D005098 ORTHO05D006646 9.3e-68 261.5 174 74.7
Mapoly0047s0044 Marchantia polymorpha HOM05D005098 ORTHO05D006646 1.4e-63 247.7 234 53.8
Rhsim02G0128000 Rhododendron simsii HOM05D005098 ORTHO05D006646 4.2e-60 236.1 210 62.9
GSVIVG01002931001 Vitis vinifera HOM05D005098 ORTHO05D006646 2.7e-59 233.4 146 78.1
Pp3c3_5470 Physcomitrium patens HOM05D005098 ORTHO05D006646 1.9e-57 227.3 240 48.8
Duzib192G0974 Durio zibethinus HOM05D005098 ORTHO05D006646 2.8e-56 223.4 230 53.0
SMO271G0092 Selaginella moellendorffii HOM05D005098 ORTHO05D006646 1.9e-52 210.7 263 42.2
GSVIVG01002018001 Vitis vinifera HOM05D005098 ORTHO05D006646 2.6e-46 190.3 106 88.7
SHI01874 Sapria himalayana HOM05D005098 ORTHO05D006646 3.8e-45 186.4 133 68.4
CBR_g44575 Chara braunii HOM05D005098 ORTHO05D006646 1.1e-44 184.9 232 44.0
CBR_g45762 Chara braunii HOM05D005098 ORTHO05D006646 2.2e-40 170.6 232 41.4
FAN16G0038 Fragaria x ananassa HOM05D005098 ORTHO05D006646 3.7e-40 169.9 135 65.2
arahy.Tifrunner.gnm1.ann1.MC3R28 Arachis hypogaea HOM05D005098 ORTHO05D006646 7.2e-36 155.6 161 55.3
SEGI_32979 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 3.7e-32 143.3 118 63.6
Haze_06488 Corylus avellana HOM05D005098 ORTHO05D006646 8.2e-32 142.1 92 76.1
Cc01_g06850 Coffea canephora HOM05D005098 ORTHO05D006646 3.5e-30 136.7 108 66.7
MELO3C007290.2 Cucumis melo HOM05D005098 ORTHO05D006646 5.5e-28 129.4 78 82.1
FAN16G1787 Fragaria x ananassa HOM05D005098 ORTHO05D006646 3.6e-27 126.7 92 65.2
Ca_18535_v3 Cicer arietinum L. HOM05D005098 ORTHO05D006646 2.3e-26 124.0 200 42.0
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 3.3e-25 120.2 71 85.9
AagrBONN_evm.TU.Sc2ySwM_117.270 Anthoceros agrestis HOM05D005098 ORTHO05D006646 1.3e-24 118.2 100 57.0
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 1.1e-23 115.2 70 82.9
Gohir.D09G038350 Gossypium hirsutum HOM05D005098 ORTHO05D006646 1.4e-23 114.8 70 82.9
Cfa026287 Carpinus fangiana HOM05D003704 ORTHO05D005892 2.7e-22 110.5 241 30.7
Aqoxy3G01796 Aquilegia oxysepala HOM05D005098 ORTHO05D031290 3.5e-22 110.2 54 98.1
MCO15G365 Micromonas commoda HOM05D005098 ORTHO05D006646 5.9e-22 109.4 219 32.4
PGSC0003DMG400022441 Solanum tuberosum HOM05D005098 ORTHO05D006646 1.1e-15 88.6 54 74.1
Rhsim06G0079100 Rhododendron simsii HOM05D005098 ORTHO05D006646 2.0e-14 84.3 57 75.4
PRCOL_00001787 Prasinoderma coloniale HOM05D005098 ORTHO05D006646 7.7e-14 82.4 156 36.5
Gohir.A04G102400 Gossypium hirsutum HOM05D005098 ORTHO05D006646 1.0e-13 82.0 51 80.4
SEGI_03475 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 1.5e-12 78.2 58 58.6
FAN08G2831 Fragaria x ananassa HOM05D005098 ORTHO05D031290 1.8e-10 71.2 68 57.4
Cre09.g403300 Chlamydomonas reinhardtii HOM05D005098 ORTHO05D006646 2.3e-10 70.9 304 23.4
Glyma.13G152508 Glycine max HOM05D005098 ORTHO05D046693 4.0e-10 70.1 37 86.5
arahy.Tifrunner.gnm1.ann1.AUX6FS Arachis hypogaea HOM05D005098 ORTHO05D006646 9.2e-07 58.9 29 93.1
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.2e-06 58.5 36 80.6
Gohir.D10G060133 Gossypium hirsutum HOM05D005098 ORTHO05D006646 4.5e-06 56.6 35 80.0


User provided reference genes

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