Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01794 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 5.8e-52 207.2 101 100.0
Aqoxy7G02591 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 2.1e-49 198.7 98 99.0
PGR142G2026 Punica granatum HOM05D005098 ORTHO05D006646 4.6e-41 171.0 98 78.6
TAR627G0710 Trochodendron aralioides HOM05D005098 ORTHO05D006646 1.5e-39 166.0 97 81.4
Potri.004G041600 Populus trichocarpa HOM05D005098 ORTHO05D006646 2.5e-39 165.2 98 80.6
PSO832G2562 Papaver somniferum HOM05D005098 ORTHO05D006646 3.3e-39 164.9 99 78.8
Eucgr.E03123 Eucalyptus grandis HOM05D005098 ORTHO05D006646 4.3e-39 164.5 97 76.3
Manes.17G044000 Manihot esculenta HOM05D005098 ORTHO05D006646 4.3e-39 164.5 98 78.6
Nn1g06591 Nelumbo nucifera HOM05D005098 ORTHO05D006646 5.7e-39 164.1 97 77.3
Eucgr.E03323 Eucalyptus grandis HOM05D005098 ORTHO05D006646 9.6e-39 163.3 97 75.3
PSO210G7403 Papaver somniferum HOM05D005098 ORTHO05D006646 1.3e-38 162.9 99 78.8
TWI38G1357 Tripterygium wilfordii HOM05D005098 ORTHO05D006646 1.3e-38 162.9 98 75.5
Lj7A690T49 Lonicera japonica HOM05D005098 ORTHO05D006646 2.1e-38 162.2 96 79.2
Sabra04G0025700 Salix brachista HOM05D005098 ORTHO05D006646 2.1e-38 162.2 98 78.6
SalBow3G0169 Salvia bowleyana HOM05D005098 ORTHO05D006646 2.1e-38 162.2 97 77.3
MSTRG.2567 Avicennia marina HOM05D005098 ORTHO05D006646 3.7e-38 161.4 97 77.3
AUR62016992 Chenopodium quinoa HOM05D005098 ORTHO05D006646 3.7e-38 161.4 98 73.5
Solyc02g078440.3 Solanum lycopersicum HOM05D005098 ORTHO05D006646 3.7e-38 161.4 97 76.3
Sopen02g023290 Solanum pennellii HOM05D005098 ORTHO05D006646 3.7e-38 161.4 97 76.3
CiPaw.09G058200 Carya illinoinensis HOM05D005098 ORTHO05D006646 4.8e-38 161.0 98 77.6
ClCG01G022890 Citrullus lanatus HOM05D005098 ORTHO05D006646 4.8e-38 161.0 98 76.5
Actinidia07581 Actinidia chinensis HOM05D005098 ORTHO05D006646 6.3e-38 160.6 98 75.5
CAN.G1164.12 Capsicum annuum HOM05D005098 ORTHO05D006646 1.1e-37 159.8 98 76.5
CsaV3_6G050060 Cucumis sativus L. HOM05D005098 ORTHO05D006646 1.1e-37 159.8 98 75.5
Nitab4.5_0000119g0020 Nicotiana tabacum HOM05D005098 ORTHO05D006646 1.1e-37 159.8 100 74.0
CSS0027379 Camellia sinensis var. sinensis HOM05D005098 ORTHO05D006646 1.8e-37 159.1 97 75.3
CANSAT35G1139 Cannabis sativa HOM05D005098 ORTHO05D006646 1.8e-37 159.1 97 77.3
Migut.G00672 Erythranthe guttata HOM05D005098 ORTHO05D006646 1.8e-37 159.1 97 75.3
Peaxi162Scf00736g00425 Petunia axillaris HOM05D005098 ORTHO05D006646 1.8e-37 159.1 98 75.5
AUR62014801 Chenopodium quinoa HOM05D005098 ORTHO05D006646 4.1e-37 157.9 98 73.5
Nitab4.5_0002158g0040 Nicotiana tabacum HOM05D005098 ORTHO05D006646 6.9e-37 157.1 96 76.0
Cpa.g.sc27.58 Carica papaya HOM05D005098 ORTHO05D006646 9.0e-37 156.8 96 72.9
Lalb_Chr16g0383691 Lupinus albus HOM05D005098 ORTHO05D006646 9.0e-37 156.8 98 74.5
QL05p039825 Quercus lobata HOM05D005098 ORTHO05D006646 9.0e-37 156.8 100 72.0
SGA_v2.0_scaffold111G31518 Striga asiatica HOM05D005098 ORTHO05D006646 1.5e-36 156.0 97 73.2
HPP92_021892 Vanilla planifolia HOM05D005098 ORTHO05D006646 1.5e-36 156.0 98 73.5
Ah.09g237250 Amaranthus hybridus HOM05D005098 ORTHO05D006646 2.0e-36 155.6 99 72.7
Hund21233 Selenicereus undatus HOM05D005098 ORTHO05D006646 2.6e-36 155.2 98 74.5
vmacro15900 Vaccinium macrocarpon HOM05D005098 ORTHO05D006646 2.6e-36 155.2 96 76.0
ATR0680G123 Amborella trichopoda HOM05D005098 ORTHO05D006646 3.4e-36 154.8 98 72.4
Gohir.D10G025400 Gossypium hirsutum HOM05D005098 ORTHO05D006646 7.6e-36 153.7 96 74.0
Gorai.011G026700 Gossypium raimondii HOM05D005098 ORTHO05D006646 7.6e-36 153.7 96 74.0
VMungo0647G1277 Vigna mungo HOM05D005098 ORTHO05D006646 7.6e-36 153.7 98 72.4
Atru.chr10.1909 Acer truncatum HOM05D005098 ORTHO05D006646 1.0e-35 153.3 98 74.5
Glyma.13G180800 Glycine max HOM05D005098 ORTHO05D006646 1.0e-35 153.3 98 72.4
Zm00001eb065950 Zea mays HOM05D005098 ORTHO05D006646 1.0e-35 153.3 98 72.4
AL7G37700 Arabidopsis lyrata HOM05D005098 ORTHO05D006646 1.3e-35 152.9 96 69.8
Sp7g17170 Schrenkiella parvula HOM05D005098 ORTHO05D006646 1.3e-35 152.9 96 69.8
arahy.Tifrunner.gnm1.ann1.AUX6FS Arachis hypogaea HOM05D005098 ORTHO05D006646 1.7e-35 152.5 101 71.3
CARHR223580 Cardamine hirsuta HOM05D005098 ORTHO05D006646 1.7e-35 152.5 96 70.8
Glyma.07G195500 Glycine max HOM05D005098 ORTHO05D006646 1.7e-35 152.5 98 71.4
Nitab4.5_0005954g0050 Nicotiana tabacum HOM05D005098 ORTHO05D006646 1.7e-35 152.5 104 72.1
RhsimUnG0054100 Rhododendron simsii HOM05D005098 ORTHO05D006646 1.7e-35 152.5 96 74.0
Lj4g0017402 Lotus japonicus HOM05D005098 ORTHO05D006646 2.2e-35 152.1 98 73.5
EL10Ac8g20363 Beta vulgaris HOM05D005098 ORTHO05D006646 2.9e-35 151.8 97 72.2
Carub.0007s2440 Capsella rubella HOM05D005098 ORTHO05D006646 2.9e-35 151.8 96 68.8
Gohir.A10G024700 Gossypium hirsutum HOM05D005098 ORTHO05D006646 3.8e-35 151.4 96 72.9
Rhsim10G0081000 Rhododendron simsii HOM05D005098 ORTHO05D006646 3.8e-35 151.4 94 74.5
THA.LOC104814462 Tarenaya hassleriana HOM05D005098 ORTHO05D006646 3.8e-35 151.4 96 72.9
BcaC09g50435 Brassica carinata HOM05D005098 ORTHO05D006646 5.0e-35 151.0 96 68.8
BcaNung00134 Brassica carinata HOM05D005098 ORTHO05D006646 5.0e-35 151.0 96 68.8
C01p25440 Brassica napus HOM05D005098 ORTHO05D006646 5.0e-35 151.0 96 68.8
BraA01t01956Z Brassica rapa HOM05D005098 ORTHO05D006646 5.0e-35 151.0 96 68.8
arahy.Tifrunner.gnm1.ann1.Q8E5AY Arachis hypogaea HOM05D005098 ORTHO05D006646 6.5e-35 150.6 98 71.4
Duzib192G0974 Durio zibethinus HOM05D005098 ORTHO05D006646 6.5e-35 150.6 98 73.5
HanXRQChr17g0560221 Helianthus annuus HOM05D005098 ORTHO05D006646 6.5e-35 150.6 98 71.4
Lsat_1_v5_gn_4_52761 Lactuca sativa HOM05D005098 ORTHO05D006646 6.5e-35 150.6 98 71.4
Duzib235G1364 Durio zibethinus HOM05D005098 ORTHO05D006646 8.4e-35 150.2 98 72.4
Medtr3g072660 Medicago truncatula HOM05D005098 ORTHO05D006646 8.4e-35 150.2 98 69.4
AT4G17020 Arabidopsis thaliana HOM05D005098 ORTHO05D006646 1.4e-34 149.4 96 68.8
Thecc.06G189900 Theobroma cacao HOM05D005098 ORTHO05D006646 1.9e-34 149.1 96 74.0
MELO3C007290.2 Cucumis melo HOM05D005098 ORTHO05D006646 2.5e-34 148.7 91 74.7
Cc01_g06430 Coffea canephora HOM05D005098 ORTHO05D006646 3.2e-34 148.3 97 71.1
Thhalv10025179m.g Eutrema salsugineum HOM05D005098 ORTHO05D006646 3.2e-34 148.3 96 67.7
Medtr4g088935 Medicago truncatula HOM05D005098 ORTHO05D006646 3.2e-34 148.3 98 68.4
ECA234G2003 Erigeron canadensis HOM05D005098 ORTHO05D006646 4.2e-34 147.9 98 70.4
Psat7g112680 Pisum sativum HOM05D005098 ORTHO05D006646 4.2e-34 147.9 98 67.3
TPR.G12033 Trifolium pratense HOM05D005098 ORTHO05D006646 4.2e-34 147.9 98 68.4
DCAR_028090 Daucus carota HOM05D005098 ORTHO05D006646 5.5e-34 147.5 95 72.6
Os04g0680000 Oryza sativa ssp. japonica HOM05D005098 ORTHO05D006646 7.2e-34 147.1 98 68.4
SEGI_14594 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 7.2e-34 147.1 97 68.0
SEGI_34698 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 7.2e-34 147.1 97 68.0
Rhsim02G0128000 Rhododendron simsii HOM05D005098 ORTHO05D006646 2.1e-33 145.6 96 72.9
RcHm_v2.0_Chr5g0008121 Rosa chinensis HOM05D005098 ORTHO05D006646 4.6e-33 144.4 101 71.3
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.0e-32 143.3 90 74.4
Aa31LG2G13100 Aethionema arabicum HOM05D005098 ORTHO05D006646 1.8e-32 142.5 96 66.7
A01p20290 Brassica napus HOM05D005098 ORTHO05D006646 1.8e-32 142.5 90 67.8
FvH4_3g09430 Fragaria vesca HOM05D005098 ORTHO05D006646 2.3e-32 142.1 101 69.3
FAN11G1346 Fragaria x ananassa HOM05D005098 ORTHO05D006646 2.3e-32 142.1 101 69.3
FAN16G0038 Fragaria x ananassa HOM05D005098 ORTHO05D006646 6.7e-32 140.6 101 68.3
MD05G1314300 Malus domestica HOM05D005098 ORTHO05D006646 3.3e-31 138.3 99 67.7
MD10G1295600 Malus domestica HOM05D005098 ORTHO05D006646 1.3e-30 136.3 99 66.7
unitig_736.g22566 Utricularia gibba HOM05D005098 ORTHO05D006646 3.7e-30 134.8 82 74.4
Haze_06488 Corylus avellana HOM05D005098 ORTHO05D006646 1.1e-29 133.3 78 76.9
Dinv40543 Davidia involucrata HOM05D005098 ORTHO05D006646 5.3e-29 131.0 97 66.0
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 2.0e-28 129.0 82 68.3
SEGI_19813 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 3.4e-28 128.3 96 62.5
Haze_05744 Corylus avellana HOM05D005098 ORTHO05D006646 1.0e-27 126.7 82 72.0
Prupe.4G044800 Prunus persica HOM05D005098 ORTHO05D006646 1.7e-27 125.9 94 66.0
GSVIVG01002018001 Vitis vinifera HOM05D005098 ORTHO05D006646 3.2e-26 121.7 85 68.2
SHI01874 Sapria himalayana HOM05D005098 ORTHO05D006646 6.1e-25 117.5 96 61.5
Pp3c3_5470 Physcomitrium patens HOM05D005098 ORTHO05D006646 5.7e-23 110.9 96 51.0
Oeu017728.1 Olea europaea HOM05D005098 ORTHO05D006646 1.7e-22 109.4 69 71.0
Mapoly0047s0044 Marchantia polymorpha HOM05D005098 ORTHO05D006646 6.3e-22 107.5 96 51.0
Phvul.002G227900 Phaseolus vulgaris HOM05D005098 ORTHO05D006646 1.4e-21 106.3 72 66.7
SMO271G0092 Selaginella moellendorffii HOM05D005098 ORTHO05D006646 5.3e-21 104.4 94 53.2
Duzib209G0004 Durio zibethinus HOM05D005098 ORTHO05D006646 2.0e-20 102.4 72 65.3
MBI18_g17000_MAGBIO Magnolia biondii HOM05D005098 ORTHO05D006646 3.4e-20 101.7 98 56.1
CBR_g44575 Chara braunii HOM05D005098 ORTHO05D006646 7.7e-20 100.5 95 43.2
CBR_g45762 Chara braunii HOM05D005098 ORTHO05D006646 1.4e-18 96.3 95 40.0
AagrBONN_evm.TU.Sc2ySwM_117.270 Anthoceros agrestis HOM05D005098 ORTHO05D006646 3.2e-18 95.1 95 49.5
FAN11G1498 Fragaria x ananassa HOM05D005098 ORTHO05D006646 1.2e-17 93.2 56 76.8
FAN21G0237 Fragaria x ananassa HOM05D005098 ORTHO05D006646 3.6e-17 91.7 56 75.0
Ca_18535_v3 Cicer arietinum L. HOM05D005098 ORTHO05D006646 7.9e-17 90.5 53 73.6
Cc01_g06820 Coffea canephora HOM05D005098 ORTHO05D006646 3.9e-16 88.2 58 70.7
COL.COLO4_32260 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.7e-14 82.8 61 63.9
Cre09.g403300 Chlamydomonas reinhardtii HOM05D005098 ORTHO05D006646 1.6e-12 76.3 97 38.1
PRCOL_00001787 Prasinoderma coloniale HOM05D005098 ORTHO05D006646 6.1e-09 64.3 97 34.0
Gorai.006G108000 Gossypium raimondii HOM05D005098 ORTHO05D006646 9.7e-07 57.0 29 86.2


User provided reference genes

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