Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 0.0e+00 1164.8 606 100.0
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 2.1e-277 958.7 614 84.4
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 4.6e-237 824.7 605 70.1
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 3.7e-234 815.1 602 68.9
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 3.1e-233 812.0 602 68.8
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.3e-226 790.0 608 67.1
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 4.8e-226 788.1 608 67.6
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.4e-225 786.6 495 83.0
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 1.8e-220 769.6 606 64.9
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 5.7e-219 764.6 599 66.9
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 3.1e-217 758.8 606 66.0
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 4.7e-213 745.0 583 67.6
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.0e-212 743.8 623 62.9
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 1.1e-209 733.8 602 64.0
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.1e-206 723.8 607 61.9
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.5e-206 722.6 607 61.8
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 3.6e-205 718.8 556 67.3
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 1.4e-204 716.8 611 61.4
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 4.0e-204 715.3 607 61.3
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 5.2e-204 714.9 611 60.7
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 8.8e-204 714.1 609 60.8
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 5.7e-203 711.4 603 61.2
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 5.7e-203 711.4 738 54.2
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 1.3e-202 710.3 611 61.2
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 3.7e-202 708.8 608 60.0
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.1e-201 707.2 611 60.6
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 4.1e-201 705.3 607 60.3
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 5.3e-201 704.9 608 61.0
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 9.1e-201 704.1 607 60.1
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 4.5e-200 701.8 611 59.4
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 1.5e-198 696.8 604 60.9
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 9.4e-198 694.1 611 59.7
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 1.2e-197 693.7 611 59.7
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 1.2e-197 693.7 604 59.1
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 8.0e-197 691.0 611 59.9
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 1.8e-193 679.9 607 58.5
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 1.8e-193 679.9 609 59.3
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 3.1e-193 679.1 620 57.9
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 5.4e-193 678.3 607 58.2
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 7.0e-193 677.9 609 60.8
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 7.0e-193 677.9 610 60.7
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 3.5e-192 675.6 601 59.6
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 4.5e-192 675.2 702 53.7
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 6.5e-191 671.4 596 60.6
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 1.1e-190 670.6 712 53.5
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 5.5e-190 668.3 619 60.1
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 3.6e-189 665.6 600 59.7
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 1.2e-187 660.6 602 58.3
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 1.2e-187 660.6 612 57.5
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 2.6e-187 659.4 599 56.4
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 5.7e-187 658.3 610 58.2
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.8e-186 656.0 599 56.6
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 1.1e-185 654.1 599 59.1
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 1.8e-185 653.3 607 56.7
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 9.1e-185 651.0 605 58.2
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 1.2e-184 650.6 636 55.3
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 2.3e-183 646.4 607 56.5
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 1.9e-182 643.3 603 55.9
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 2.5e-182 642.9 608 55.4
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 4.2e-182 642.1 607 56.3
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 2.1e-181 639.8 608 58.2
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 3.6e-181 639.0 573 60.0
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 1.8e-180 636.7 606 56.4
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 6.8e-180 634.8 624 57.7
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 8.9e-180 634.4 624 55.4
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 1.2e-179 634.0 607 55.5
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 3.4e-179 632.5 607 55.5
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 5.7e-179 631.7 635 54.3
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 1.4e-177 627.1 606 55.8
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 1.4e-177 627.1 612 55.9
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 4.1e-177 625.5 610 54.4
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 7.8e-176 621.3 606 56.3
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.3e-175 620.5 599 54.8
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 2.3e-175 619.8 607 55.4
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 3.9e-175 619.0 606 55.6
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 5.0e-175 618.6 670 51.5
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.6e-175 618.2 723 47.3
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 1.9e-174 616.7 615 55.3
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 9.5e-174 614.4 596 57.4
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 2.1e-173 613.2 555 57.5
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 4.7e-173 612.1 608 53.8
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 8.0e-173 611.3 610 53.8
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.0e-172 610.9 608 54.1
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 6.4e-170 601.7 599 53.6
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 1.4e-169 600.5 599 53.4
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 1.9e-169 600.1 601 53.7
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 4.6e-168 595.5 599 53.3
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 6.0e-168 595.1 598 52.8
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 6.0e-168 595.1 598 52.8
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 6.0e-168 595.1 598 52.8
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 7.8e-168 594.7 607 53.9
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 1.0e-167 594.3 591 53.3
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 1.3e-167 594.0 676 49.6
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 9.5e-166 587.8 590 53.2
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 1.1e-164 584.3 535 55.5
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 4.0e-164 582.4 608 53.6
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 4.9e-162 575.5 604 51.8
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 5.4e-161 572.0 592 52.4
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 2.5e-158 563.1 606 53.5
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 2.5e-158 563.1 492 62.4
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.1e-157 560.1 451 65.9
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.7e-154 550.4 548 54.2
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 5.1e-151 538.9 616 50.2
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.1e-150 537.7 366 75.1
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 1.6e-149 533.9 602 50.5
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 8.1e-149 531.6 539 52.5
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 4.4e-147 525.8 614 47.4
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 8.7e-143 511.5 424 62.0
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 5.8e-139 498.8 469 56.3
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 2.9e-138 496.5 615 43.9
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 6.4e-138 495.4 606 46.0
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 8.7e-135 485.0 607 46.6
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 1.6e-125 454.1 392 58.9
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 2.1e-125 453.8 411 60.6
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 2.1e-120 437.2 367 63.8
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 2.9e-114 416.8 579 43.7
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 2.5e-110 403.7 479 49.7
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 3.3e-110 403.3 606 40.1
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.2e-107 394.8 351 57.0
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 1.2e-107 394.8 414 51.7
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 7.2e-105 385.6 372 56.5
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 1.5e-99 367.9 374 53.5
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 4.5e-99 366.3 479 47.8
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 2.5e-97 360.5 559 42.0
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 9.7e-94 348.6 489 44.2
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 1.3e-90 338.2 446 47.5
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.0e-87 328.6 467 43.7
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.7e-85 320.1 441 43.5
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 1.9e-81 307.8 225 68.0
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 4.0e-79 300.1 197 73.6
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 3.2e-73 280.4 187 73.3
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 4.4e-70 270.0 210 61.9
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 1.0e-66 258.8 321 46.1
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 2.1e-64 251.1 340 46.5
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.6e-64 250.4 377 40.3
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 2.3e-63 247.7 200 65.0
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.0e-62 244.6 366 42.1
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.8e-60 238.0 197 59.4
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-60 237.3 245 51.4
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 1.6e-59 235.0 282 47.5
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 1.0e-58 232.3 180 60.0
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 3.3e-57 227.3 471 35.7
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 4.4e-54 216.9 356 42.1
CiPaw.14G066700 Carya illinoinensis HOM05D003810 ORTHO05D004416 3.5e-51 207.2 220 54.5
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 2.8e-48 197.6 169 63.3
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 3.6e-48 197.2 169 63.3
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 1.8e-47 194.9 150 60.7
HPP92_016056 Vanilla planifolia HOM05D003810 ORTHO05D004416 7.5e-46 189.5 120 75.8
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 4.1e-44 183.7 215 49.8
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 3.5e-43 180.6 199 53.8
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 1.7e-37 161.8 225 42.7
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 7.8e-35 152.9 236 39.0
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 2.4e-28 131.3 122 50.0
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 1.6e-27 128.6 147 51.0
MCO14G434 Micromonas commoda HOM05D003810 ORTHO05D004416 4.3e-25 120.6 738 22.6
PRCOL_00004489 Prasinoderma coloniale HOM05D003810 ORTHO05D004416 5.6e-25 120.2 570 24.0
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 7.3e-25 119.8 192 40.6
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 4.8e-24 117.1 187 40.1
SGA_v2.0_scaffold126G33829 Striga asiatica HOM05D003810 ORTHO05D004416 1.1e-23 115.9 173 41.0
CAN.G790.44 Capsicum annuum HOM05D000872 ORTHO05D000777 1.4e-23 115.5 197 39.6
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 6.9e-23 113.2 167 43.1
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 9.0e-23 112.8 65 81.5
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 1.2e-22 112.5 103 56.3
Sabra05G0051600 Salix brachista HOM05D003810 ORTHO05D004416 4.9e-21 107.1 259 32.0
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 2.1e-19 101.7 80 61.2
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 3.5e-19 100.9 76 65.8
CAN.G312.5 Capsicum annuum HOM05D003810 ORTHO05D000001 6.0e-19 100.1 171 40.9
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 1.0e-18 99.4 157 41.4
ClCG09G022970 Citrullus lanatus HOM05D003810 ORTHO05D004416 8.1e-16 89.7 70 62.9
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 2.4e-15 88.2 145 38.6
Hund08475 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.5e-14 84.0 59 67.8
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 7.6e-14 83.2 108 43.5
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 6.4e-13 80.1 74 55.4
Cre10.g466550 Chlamydomonas reinhardtii HOM05D003810 ORTHO05D004416 1.6e-11 75.5 197 29.4
SHI21692 Sapria himalayana HOM05D003810 ORTHO05D004416 7.9e-11 73.2 109 37.6
CAN.G11.19 Capsicum annuum HOM05D003810 ORTHO05D004416 1.8e-10 72.0 56 60.7
TPR.G30768 Trifolium pratense HOM05D003810 ORTHO05D004416 5.1e-10 70.5 66 57.6
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 8.7e-10 69.7 52 63.5
Hund17711 Selenicereus undatus HOM05D003810 ORTHO05D004416 2.5e-09 68.2 50 64.0
Lsat_1_v5_gn_2_75840 Lactuca sativa HOM05D001134 ORTHO05D004416 7.4e-09 66.6 96 42.7
Nitab4.5_0001303g0160 Nicotiana tabacum HOM05D003810 ORTHO05D004416 7.4e-09 66.6 203 29.1
CAN.G1077.9 Capsicum annuum HOM05D000222 ORTHO05D012343 6.2e-08 63.5 159 32.7
MD08G1246200 Malus domestica HOM05D003810 ORTHO05D004416 2.4e-07 61.6 157 36.9
CAN.G523.5 Capsicum annuum HOM05D000222 ORTHO05D012343 6.9e-07 60.1 63 50.8
MD08G1246500 Malus domestica HOM05D003810 ORTHO05D004416 9.0e-07 59.7 45 66.7
A07p35570 Brassica napus HOM05D003810 ORTHO05D004416 4.5e-06 57.4 50 56.0
BraA07t31145Z Brassica rapa HOM05D003810 ORTHO05D004416 4.5e-06 57.4 50 56.0


User provided reference genes

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