Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00239 Aquilegia oxysepala HOM05D003321 ORTHO05D019677 2.8e-192 675.2 369 100.0
TWI34G1126 Tripterygium wilfordii HOM05D003321 ORTHO05D005161 5.0e-77 292.4 316 51.9
Manes.15G172400 Manihot esculenta HOM05D003321 ORTHO05D005161 3.3e-76 289.7 370 47.6
Actinidia06077 Actinidia chinensis HOM05D003321 ORTHO05D005161 5.6e-76 288.9 303 52.8
Aqoxy3G03281 Aquilegia oxysepala HOM05D003321 ORTHO05D005161 7.3e-76 288.5 291 55.3
RhsimUnG0055900 Rhododendron simsii HOM05D003321 ORTHO05D005161 9.5e-76 288.1 302 52.6
ECA234G3709 Erigeron canadensis HOM05D003321 ORTHO05D005161 1.2e-75 287.7 313 50.5
HanXRQChr16g0519581 Helianthus annuus HOM05D003321 ORTHO05D005161 1.6e-75 287.3 303 51.2
Actinidia23569 Actinidia chinensis HOM05D003321 ORTHO05D005161 1.0e-74 284.6 298 52.7
Medtr5g082570 Medicago truncatula HOM05D003321 ORTHO05D005161 1.4e-74 284.3 315 49.8
Glyma.01G136100 Glycine max HOM05D003321 ORTHO05D005161 1.8e-74 283.9 303 50.2
Glyma.03G031900 Glycine max HOM05D003321 ORTHO05D005161 3.1e-74 283.1 303 50.2
Nn4g23059 Nelumbo nucifera HOM05D003321 ORTHO05D005161 4.0e-74 282.7 302 53.3
Phvul.004G026200 Phaseolus vulgaris HOM05D003321 ORTHO05D005161 4.0e-74 282.7 303 50.5
FAN14G0823 Fragaria x ananassa HOM05D003321 ORTHO05D005161 6.8e-74 282.0 294 53.1
FvH4_6g49210 Fragaria vesca HOM05D003321 ORTHO05D005161 1.5e-73 280.8 294 52.7
Potri.017G078500 Populus trichocarpa HOM05D003321 ORTHO05D005161 1.5e-73 280.8 300 51.0
TAR622G1354 Trochodendron aralioides HOM05D003321 ORTHO05D005161 1.5e-73 280.8 315 51.4
Ca_05956_v3 Cicer arietinum L. HOM05D003321 ORTHO05D005161 2.0e-73 280.4 303 50.5
FAN09G2305 Fragaria x ananassa HOM05D003321 ORTHO05D005161 2.0e-73 280.4 294 52.7
TWI60G1051 Tripterygium wilfordii HOM05D003321 ORTHO05D005161 2.0e-73 280.4 301 51.2
Lsat_1_v5_gn_4_46121 Lactuca sativa HOM05D003321 ORTHO05D005161 3.4e-73 279.6 284 52.5
Potri.004G124000 Populus trichocarpa HOM05D003321 ORTHO05D005161 4.4e-73 279.3 320 50.0
Lj2g0002473 Lotus japonicus HOM05D003321 ORTHO05D005161 5.8e-73 278.9 303 50.5
VMungo0464G0737 Vigna mungo HOM05D003321 ORTHO05D005161 5.8e-73 278.9 301 49.8
Hma1.2p1_0247F.1_g101800 Hydrangea macrophylla HOM05D003321 ORTHO05D005161 7.5e-73 278.5 322 51.2
Ca_13366_v3 Cicer arietinum L. HOM05D003321 ORTHO05D005161 9.8e-73 278.1 298 50.7
HanXRQChr02g0056421 Helianthus annuus HOM05D003321 ORTHO05D005161 9.8e-73 278.1 276 54.0
Eucgr.I01920 Eucalyptus grandis HOM05D003321 ORTHO05D005161 1.3e-72 277.7 293 50.5
FAN09G2289 Fragaria x ananassa HOM05D003321 ORTHO05D005161 1.3e-72 277.7 294 51.7
Manes.15G176600 Manihot esculenta HOM05D003321 ORTHO05D005161 1.3e-72 277.7 301 52.2
arahy.Tifrunner.gnm1.ann1.QM6JB0 Arachis hypogaea HOM05D003321 ORTHO05D005161 1.7e-72 277.3 316 49.1
Sabra17G0069700 Salix brachista HOM05D003321 ORTHO05D005161 2.2e-72 276.9 312 50.0
EL10Ac5g10521 Beta vulgaris HOM05D003321 ORTHO05D005161 2.9e-72 276.6 318 49.7
Migut.K01331 Erythranthe guttata HOM05D003321 ORTHO05D005161 2.9e-72 276.6 311 50.5
FAN14G5472 Fragaria x ananassa HOM05D003321 ORTHO05D005161 2.9e-72 276.6 296 51.4
Phvul.011G212400 Phaseolus vulgaris HOM05D003321 ORTHO05D005161 3.7e-72 276.2 298 49.7
Lj2g0024928 Lotus japonicus HOM05D003321 ORTHO05D005161 4.9e-72 275.8 315 49.5
Medtr1g022345 Medicago truncatula HOM05D003321 ORTHO05D005161 4.9e-72 275.8 301 50.5
Gohir.A11G069100 Gossypium hirsutum HOM05D003321 ORTHO05D005161 6.4e-72 275.4 289 52.2
Gohir.D11G073100 Gossypium hirsutum HOM05D003321 ORTHO05D005161 6.4e-72 275.4 289 52.2
Gorai.007G078500 Gossypium raimondii HOM05D003321 ORTHO05D005161 6.4e-72 275.4 289 52.2
Lsat_1_v5_gn_2_88641 Lactuca sativa HOM05D003321 ORTHO05D005161 6.4e-72 275.4 277 53.1
Sed0022026 Sechium edule HOM05D003321 ORTHO05D005161 8.3e-72 275.0 292 51.7
Dinv33721 Davidia involucrata HOM05D003321 ORTHO05D005161 1.1e-71 274.6 275 54.2
FAN05G4145 Fragaria x ananassa HOM05D003321 ORTHO05D005161 1.4e-71 274.2 289 51.9
Lju41A25T61 Lonicera japonica HOM05D003321 ORTHO05D005161 1.4e-71 274.2 276 54.0
Prupe.3G271500 Prunus persica HOM05D003321 ORTHO05D005161 1.9e-71 273.9 283 51.2
Atru.chr8.1903 Acer truncatum HOM05D003321 ORTHO05D005161 3.2e-71 273.1 285 51.6
TPR.G20170 Trifolium pratense HOM05D003321 ORTHO05D005161 3.2e-71 273.1 295 49.8
AUR62011989 Chenopodium quinoa HOM05D003321 ORTHO05D005161 9.2e-71 271.6 318 50.0
CSS0001778 Camellia sinensis var. sinensis HOM05D003321 ORTHO05D005161 1.2e-70 271.2 275 53.8
PSO591G0346 Papaver somniferum HOM05D003321 ORTHO05D005161 1.2e-70 271.2 303 51.2
AUR62032308 Chenopodium quinoa HOM05D003321 ORTHO05D005161 1.6e-70 270.8 318 50.0
Haze_14579 Corylus avellana HOM05D003321 ORTHO05D005161 1.6e-70 270.8 283 52.3
PSO832G3448 Papaver somniferum HOM05D003321 ORTHO05D005161 1.6e-70 270.8 306 51.0
Gorai.006G024900 Gossypium raimondii HOM05D003321 ORTHO05D005161 3.5e-70 269.6 324 48.1
Hund02846 Selenicereus undatus HOM05D003321 ORTHO05D005161 3.5e-70 269.6 311 48.9
CiPaw.04G019600 Carya illinoinensis HOM05D003321 ORTHO05D005161 6.0e-70 268.9 283 52.3
Migut.H00892 Erythranthe guttata HOM05D003321 ORTHO05D005161 6.0e-70 268.9 306 49.3
Gohir.D09G021100 Gossypium hirsutum HOM05D003321 ORTHO05D005161 6.0e-70 268.9 276 52.5
RcHm_v2.0_Chr2g0169081 Rosa chinensis HOM05D003321 ORTHO05D005161 6.0e-70 268.9 282 51.8
Glyma.13G064800 Glycine max HOM05D003321 ORTHO05D005161 7.8e-70 268.5 249 55.0
Gohir.A09G021800 Gossypium hirsutum HOM05D003321 ORTHO05D005161 7.8e-70 268.5 276 52.2
GSVIVG01011349001 Vitis vinifera HOM05D003321 ORTHO05D005161 7.8e-70 268.5 276 52.2
Duzib264G0140 Durio zibethinus HOM05D003321 ORTHO05D005161 1.0e-69 268.1 276 52.5
MD09G1047500 Malus domestica HOM05D003321 ORTHO05D005161 1.0e-69 268.1 276 51.1
Hund09520 Selenicereus undatus HOM05D003321 ORTHO05D005161 1.0e-69 268.1 314 49.0
VMungo1127G1679 Vigna mungo HOM05D003321 ORTHO05D005161 1.0e-69 268.1 292 49.0
Ciclev10011266m.g Citrus clementina HOM05D003321 ORTHO05D005161 1.3e-69 267.7 276 51.8
Lj7A400T32 Lonicera japonica HOM05D003321 ORTHO05D005161 1.3e-69 267.7 283 51.9
CiPaw.03G029600 Carya illinoinensis HOM05D003321 ORTHO05D005161 1.7e-69 267.3 275 52.7
MD17G1047600 Malus domestica HOM05D003321 ORTHO05D005161 2.3e-69 266.9 278 50.4
Psat2g033240 Pisum sativum HOM05D003321 ORTHO05D005161 2.3e-69 266.9 297 49.2
QL02p080714 Quercus lobata HOM05D003321 ORTHO05D005161 2.3e-69 266.9 275 52.7
Thecc.04G075500 Theobroma cacao HOM05D003321 ORTHO05D005161 2.3e-69 266.9 276 52.2
COL.COLO4_25165 Corchorus olitorius HOM05D003321 ORTHO05D005161 3.0e-69 266.5 276 51.8
DCAR_011159 Daucus carota HOM05D003321 ORTHO05D005161 3.0e-69 266.5 276 52.5
FAN02G3930 Fragaria x ananassa HOM05D003321 ORTHO05D005161 3.0e-69 266.5 276 52.5
unitig_899.g15507 Utricularia gibba HOM05D003321 ORTHO05D005161 5.0e-69 265.8 287 50.2
BolC7t44284H Brassica oleracea HOM05D003321 ORTHO05D005161 6.6e-69 265.4 283 51.2
ATR1120G139 Amborella trichopoda HOM05D003321 ORTHO05D005161 1.5e-68 264.2 277 51.6
C07p37670 Brassica napus HOM05D003321 ORTHO05D005161 1.5e-68 264.2 283 50.9
MSTRG.3218 Avicennia marina HOM05D003321 ORTHO05D005161 2.5e-68 263.5 288 49.3
A06p40380 Brassica napus HOM05D003321 ORTHO05D005161 2.5e-68 263.5 283 51.2
ClCG10G014840 Citrullus lanatus HOM05D003321 ORTHO05D005161 2.5e-68 263.5 276 52.2
MELO3C009890.2 Cucumis melo HOM05D003321 ORTHO05D005161 2.5e-68 263.5 276 52.2
PGR142G0788 Punica granatum HOM05D003321 ORTHO05D005161 2.5e-68 263.5 276 51.4
arahy.Tifrunner.gnm1.ann1.T0AAPV Arachis hypogaea HOM05D003321 ORTHO05D005161 4.3e-68 262.7 286 49.7
Psat6g008440 Pisum sativum HOM05D003321 ORTHO05D005161 4.3e-68 262.7 321 46.4
THA.LOC104805449 Tarenaya hassleriana HOM05D003321 ORTHO05D005161 4.3e-68 262.7 278 51.4
CANSAT64G1196 Cannabis sativa HOM05D003321 ORTHO05D005161 5.6e-68 262.3 276 51.1
Os01g0184900 Oryza sativa ssp. japonica HOM05D003321 ORTHO05D005161 5.6e-68 262.3 291 50.2
CsaV3_3G041690 Cucumis sativus L. HOM05D003321 ORTHO05D005161 7.3e-68 261.9 276 51.8
Oeu037176.3 Olea europaea HOM05D003321 ORTHO05D005161 9.5e-68 261.5 283 49.1
TPR.G38431 Trifolium pratense HOM05D003321 ORTHO05D005161 9.5e-68 261.5 281 50.2
Ah.11g050340 Amaranthus hybridus HOM05D003321 ORTHO05D005161 2.1e-67 260.4 303 49.2
BcaC06g33636 Brassica carinata HOM05D003321 ORTHO05D005161 2.1e-67 260.4 280 50.7
BcaC06g30900 Brassica carinata HOM05D003321 ORTHO05D005161 2.8e-67 260.0 272 50.7
Pp3c9_4400 Physcomitrium patens HOM05D003321 ORTHO05D005161 6.2e-67 258.8 320 48.4
MBI17_g17503_MAGBIO Magnolia biondii HOM05D003321 ORTHO05D005161 8.0e-67 258.5 287 49.5
Os05g0182600 Oryza sativa ssp. japonica HOM05D003321 ORTHO05D005161 8.0e-67 258.5 297 48.5
Zm00001eb282920 Zea mays HOM05D003321 ORTHO05D005161 8.0e-67 258.5 307 48.2
Lalb_Chr06g0175461 Lupinus albus HOM05D003321 ORTHO05D005161 1.4e-66 257.7 271 49.8
Peaxi162Scf00129g00539 Petunia axillaris HOM05D003321 ORTHO05D005161 1.4e-66 257.7 274 51.1
Zm00001eb337810 Zea mays HOM05D003321 ORTHO05D005161 1.4e-66 257.7 292 49.0
BraA06t26956Z Brassica rapa HOM05D003321 ORTHO05D005161 3.1e-66 256.5 300 48.7
SalBow1G0468 Salvia bowleyana HOM05D003321 ORTHO05D005161 4.0e-66 256.1 320 47.2
CAN.G206.123 Capsicum annuum HOM05D003321 ORTHO05D005161 6.8e-66 255.4 274 50.4
Nitab4.5_0003314g0110 Nicotiana tabacum HOM05D003321 ORTHO05D005161 8.9e-66 255.0 274 50.4
AT3G28730 Arabidopsis thaliana HOM05D003321 ORTHO05D005161 1.5e-65 254.2 281 49.5
PGSC0003DMG400018099 Solanum tuberosum HOM05D003321 ORTHO05D005161 1.5e-65 254.2 275 49.8
Solyc02g087710.3 Solanum lycopersicum HOM05D003321 ORTHO05D005161 2.0e-65 253.8 275 49.8
Sopen02g032440 Solanum pennellii HOM05D003321 ORTHO05D005161 2.0e-65 253.8 275 49.8
PGSC0003DMG400001414 Solanum tuberosum HOM05D003321 ORTHO05D005161 2.0e-65 253.8 275 49.8
SGA_v2.0_scaffold205G41764 Striga asiatica HOM05D003321 ORTHO05D005161 2.0e-65 253.8 297 48.1
CARHR151710 Cardamine hirsuta HOM05D003321 ORTHO05D005161 3.4e-65 253.1 274 49.6
Lalb_Chr02g0159551 Lupinus albus HOM05D003321 ORTHO05D005161 3.4e-65 253.1 276 48.6
BcaB07g30122 Brassica carinata HOM05D003321 ORTHO05D005161 4.4e-65 252.7 282 49.6
Sp2g17380 Schrenkiella parvula HOM05D003321 ORTHO05D005161 5.8e-65 252.3 287 48.4
BcaC03g17525 Brassica carinata HOM05D003321 ORTHO05D005161 7.5e-65 251.9 282 49.6
A02p36020 Brassica napus HOM05D003321 ORTHO05D005161 7.5e-65 251.9 282 49.6
C02p54860 Brassica napus HOM05D003321 ORTHO05D005161 7.5e-65 251.9 282 49.6
BraA02t08601Z Brassica rapa HOM05D003321 ORTHO05D005161 7.5e-65 251.9 282 49.6
Sc17g0001240 Simmondsia chinensis HOM05D003321 ORTHO05D005161 9.8e-65 251.5 292 49.0
Nitab4.5_0009739g0020 Nicotiana tabacum HOM05D003321 ORTHO05D005161 1.7e-64 250.8 288 48.6
Aa31LG2G4470 Aethionema arabicum HOM05D003321 ORTHO05D005161 2.2e-64 250.4 286 48.6
AL5G18450 Arabidopsis lyrata HOM05D003321 ORTHO05D005161 2.2e-64 250.4 276 49.3
BolC2t11547H Brassica oleracea HOM05D003321 ORTHO05D005161 2.2e-64 250.4 282 49.3
Thhalv10003803m.g Eutrema salsugineum HOM05D003321 ORTHO05D005161 4.9e-64 249.2 282 49.3
Carub.0005s0728 Capsella rubella HOM05D003321 ORTHO05D005161 8.3e-64 248.4 281 48.4
HPP92_017969 Vanilla planifolia HOM05D003321 ORTHO05D005161 1.9e-63 247.3 279 51.6
CDE05G0865 Ceratophyllum demersum HOM05D003321 ORTHO05D005161 5.4e-63 245.7 314 47.8
SEGI_27754 Sequoiadendron giganteum HOM05D003321 ORTHO05D005161 9.2e-63 245.0 321 45.8
PSO384G3545 Papaver somniferum HOM05D003321 ORTHO05D005161 2.1e-62 243.8 301 49.5
ECA238G2291 Erigeron canadensis HOM05D003321 ORTHO05D005161 6.0e-62 242.3 277 48.7
SEGI_13423 Sequoiadendron giganteum HOM05D003321 ORTHO05D005161 1.1e-60 238.0 278 48.2
Mapoly0030s0009 Marchantia polymorpha HOM05D003321 ORTHO05D005161 1.2e-59 234.6 224 55.4
Lj1g0009615 Lotus japonicus HOM05D003321 ORTHO05D005161 2.8e-59 233.4 309 43.7
CDE05G3094 Ceratophyllum demersum HOM05D003321 ORTHO05D005161 8.1e-59 231.9 261 52.1
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 2.3e-58 230.3 312 43.6
Aqoxy3G03302 Aquilegia oxysepala HOM05D003321 ORTHO05D019677 1.5e-57 227.6 221 54.8
AagrBONN_evm.TU.Sc2ySwM_362.1279 Anthoceros agrestis HOM05D003321 ORTHO05D005161 1.3e-56 224.6 310 42.9
vmacro05729 Vaccinium macrocarpon HOM05D003321 ORTHO05D005161 1.7e-56 224.2 292 45.9
SMO356G0125 Selaginella moellendorffii HOM05D003321 ORTHO05D005161 2.7e-54 216.9 303 44.6
Rhsim05G0106500 Rhododendron simsii HOM05D003321 ORTHO05D005161 4.6e-54 216.1 210 54.3
Duzib147G1608 Durio zibethinus HOM05D003321 ORTHO05D005161 2.4e-50 203.8 187 56.1
Thhalv10008631m.g Eutrema salsugineum HOM05D003321 ORTHO05D005161 1.7e-40 171.0 191 49.2
HanXRQChr04g0102631 Helianthus annuus HOM05D003321 ORTHO05D019677 6.4e-40 169.1 128 65.6
Nitab4.5_0000564g0350 Nicotiana tabacum HOM05D003321 ORTHO05D005161 1.7e-37 161.0 274 38.3
PRCOL_00006095 Prasinoderma coloniale HOM05D003321 ORTHO05D005161 1.8e-34 151.0 189 40.7
HanXRQChr06g0173771 Helianthus annuus HOM05D003321 ORTHO05D019677 5.3e-34 149.4 106 67.9
Cc07_g03050 Coffea canephora HOM05D003321 ORTHO05D005161 1.5e-33 147.9 147 51.0
SGA_v2.0_scaffold205G41773 Striga asiatica HOM05D003321 ORTHO05D005161 4.9e-32 142.9 192 42.2
Cre01.g029450 Chlamydomonas reinhardtii HOM05D003321 ORTHO05D005161 1.1e-31 141.7 258 34.1
HanXRQChr01g0022931 Helianthus annuus HOM05D003321 ORTHO05D019677 1.4e-31 141.4 107 65.4
Hma1.2p1_0105F.1_g050590 Hydrangea macrophylla HOM05D003321 ORTHO05D005161 9.3e-31 138.7 147 50.3
MCO12G387 Micromonas commoda HOM05D003321 ORTHO05D005161 6.7e-29 132.5 189 39.2
Sopen02g032430 Solanum pennellii HOM05D003321 ORTHO05D051122 2.6e-25 120.6 146 45.9
HanXRQChr15g0486151 Helianthus annuus HOM05D003321 ORTHO05D019677 1.1e-23 115.2 86 64.0
HanXRQChr11g0334501 Helianthus annuus HOM05D003321 ORTHO05D019677 3.2e-23 113.6 86 62.8
TAR371G0510 Trochodendron aralioides HOM05D003321 ORTHO05D414592 3.5e-22 110.2 154 46.8
Lsat_1_v5_gn_5_101681 Lactuca sativa HOM05D003321 ORTHO05D000541 1.0e-21 108.6 81 65.4
Cc07_g03060 Coffea canephora HOM05D003321 ORTHO05D005161 2.3e-21 107.5 123 48.0
Psat3g002600 Pisum sativum HOM05D003321 ORTHO05D004492 2.5e-20 104.0 213 33.8
CBR_g20179 Chara braunii HOM05D003321 ORTHO05D005161 1.3e-19 101.7 171 42.7
Solyc02g087680.1 Solanum lycopersicum HOM05D003321 ORTHO05D051122 1.1e-18 98.6 113 48.7
PGSC0003DMG400001413 Solanum tuberosum HOM05D003321 ORTHO05D394828 2.6e-17 94.0 156 41.0
HanXRQChr17g0550931 Helianthus annuus HOM05D003321 ORTHO05D224906 5.0e-16 89.7 75 60.0
Oeu033336.1 Olea europaea HOM05D003321 ORTHO05D005161 1.3e-13 81.6 135 40.0
Cfa021690 Carpinus fangiana HOM05D003321 ORTHO05D005161 8.7e-13 79.0 242 27.7
Hma1.2p1_0235F.1_g098910 Hydrangea macrophylla HOM05D003321 ORTHO05D005161 1.5e-12 78.2 86 46.5
ECA234G4637 Erigeron canadensis HOM05D003321 ORTHO05D008593 1.2e-06 58.5 68 45.6


User provided reference genes

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