Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.5e-136 489.6 257 100.0
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.1e-128 463.4 303 84.8
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 7.7e-101 370.9 303 68.3
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 1.6e-98 363.2 303 66.7
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 6.1e-98 361.3 301 67.8
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 3.0e-97 359.0 303 65.3
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 8.9e-97 357.5 303 65.0
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 3.6e-90 335.5 301 63.1
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 1.8e-89 333.2 306 62.4
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 5.2e-89 331.6 305 63.0
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 6.8e-89 331.3 302 63.6
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.5e-88 330.1 300 62.7
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 4.4e-88 328.6 298 63.4
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 5.8e-88 328.2 301 61.5
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 7.5e-88 327.8 305 61.6
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 1.3e-87 327.0 298 63.8
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 3.7e-87 325.5 303 60.7
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 6.4e-87 324.7 303 62.0
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 8.3e-87 324.3 303 61.1
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 3.2e-86 322.4 301 60.5
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 5.4e-86 321.6 301 61.5
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 9.2e-86 320.9 321 58.3
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 1.2e-85 320.5 321 58.3
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 1.2e-85 320.5 296 62.8
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 2.7e-85 319.3 302 60.3
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 3.5e-85 318.9 300 61.0
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 6.0e-85 318.2 300 61.3
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 1.0e-84 317.4 302 61.6
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 1.3e-84 317.0 300 60.7
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 3.0e-84 315.8 301 61.5
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 3.0e-84 315.8 299 63.5
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 3.9e-84 315.5 299 61.9
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 3.9e-84 315.5 301 59.8
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 8.6e-84 314.3 303 59.7
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 1.5e-83 313.5 301 62.5
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.9e-83 313.2 299 61.2
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 1.9e-83 313.2 299 61.2
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 3.3e-83 312.4 351 54.7
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 5.6e-83 311.6 299 61.2
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 1.6e-82 310.1 304 59.5
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 2.8e-82 309.3 299 61.5
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 6.2e-82 308.1 300 59.7
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 1.4e-81 307.0 334 56.6
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 1.8e-81 306.6 280 61.8
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 3.1e-81 305.8 324 58.6
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 6.8e-81 304.7 300 58.7
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 1.2e-80 303.9 300 58.7
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 1.2e-80 303.9 303 59.1
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.6e-80 302.8 303 61.1
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 3.4e-80 302.4 324 56.2
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 3.4e-80 302.4 298 59.7
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 3.4e-80 302.4 300 58.7
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 1.3e-79 300.4 301 59.1
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 1.7e-79 300.1 303 59.4
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 8.3e-79 297.7 301 57.8
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 1.4e-78 297.0 301 58.8
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 1.9e-78 296.6 304 59.9
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 4.1e-78 295.4 300 57.3
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 5.4e-78 295.0 262 64.1
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 2.7e-77 292.7 282 58.9
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 4.6e-77 292.0 280 60.4
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 6.0e-77 291.6 299 59.2
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 3.0e-76 289.3 302 58.3
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 5.1e-76 288.5 366 50.3
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 1.1e-75 287.3 297 58.2
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 1.5e-75 287.0 273 60.4
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 4.3e-75 285.4 297 56.6
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 2.8e-74 282.7 299 57.2
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 4.7e-74 282.0 291 57.4
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 8.1e-74 281.2 296 57.4
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 8.1e-74 281.2 296 57.4
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 1.1e-73 280.8 293 57.3
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 3.1e-73 279.3 368 48.1
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 5.2e-73 278.5 255 62.4
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 1.2e-72 277.3 298 55.0
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 1.2e-72 277.3 297 55.6
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 2.0e-72 276.6 301 54.8
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 2.6e-72 276.2 300 56.0
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 6.4e-71 271.6 319 53.3
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 1.1e-70 270.8 300 56.7
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 7.1e-70 268.1 300 54.7
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 7.1e-70 268.1 256 59.0
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 1.6e-69 266.9 280 58.6
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 1.6e-66 256.9 253 59.7
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 3.1e-65 252.7 342 46.8
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 4.0e-65 252.3 253 58.9
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 5.2e-65 251.9 307 49.8
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 6.9e-65 251.5 258 58.1
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 2.6e-64 249.6 256 59.0
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 4.9e-63 245.4 292 53.1
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 1.1e-62 244.2 324 48.5
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 1.9e-62 243.4 321 48.9
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 2.4e-62 243.0 330 50.0
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 1.6e-61 240.4 284 51.8
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 2.7e-61 239.6 301 51.2
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.3e-60 237.3 288 52.4
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 2.3e-60 236.5 253 57.3
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 5.1e-60 235.3 369 43.6
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 1.6e-58 230.3 213 60.6
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 1.6e-58 230.3 213 60.6
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 8.1e-58 228.0 326 45.4
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 3.1e-57 226.1 298 46.3
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 4.5e-56 222.2 209 60.8
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 4.9e-55 218.8 234 56.0
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 2.4e-54 216.5 256 51.6
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 4.2e-54 215.7 254 54.3
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 9.3e-54 214.5 250 55.6
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 2.7e-53 213.0 251 54.6
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 1.8e-52 210.3 247 53.8
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 5.1e-52 208.8 257 51.4
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 6.7e-52 208.4 150 74.0
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 3.3e-51 206.1 351 42.2
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.1e-49 201.1 152 70.4
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 2.6e-48 196.4 269 50.6
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 7.6e-48 194.9 191 57.6
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.1e-46 191.0 291 44.7
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 9.3e-46 188.0 243 50.6
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.6e-45 187.2 226 48.7
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 4.6e-45 185.7 132 75.0
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 3.3e-43 179.5 296 41.2
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 5.3e-41 172.2 129 72.1
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 4.2e-38 162.5 203 51.7
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 1.0e-36 157.9 214 47.7
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 1.1e-35 154.5 118 69.5
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 6.1e-21 105.5 85 65.9
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 1.5e-19 100.9 94 58.5
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 6.7e-12 75.5 324 26.9
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 1.5e-11 74.3 303 26.1
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 5.7e-11 72.4 50 68.0
Lalb_Chr12g0195851 Lupinus albus HOM05D005817 ORTHO05D007140 9.1e-09 65.1 52 61.5


User provided reference genes

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