Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy328s002 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 7.2e-120 434.1 247 100.0
Aqoxy3G01217 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 5.5e-88 328.2 177 93.2
TAR629G0508 Trochodendron aralioides HOM05D003157 ORTHO05D004447 1.7e-33 147.1 197 44.7
TAR371G0612 Trochodendron aralioides HOM05D003157 ORTHO05D004447 2.4e-30 136.7 189 45.0
Nn3g16701 Nelumbo nucifera HOM05D003157 ORTHO05D004447 7.1e-27 125.2 160 46.2
Oeu020884.3 Olea europaea HOM05D003157 ORTHO05D004447 1.1e-24 117.9 162 43.8
CSS0041144 Camellia sinensis var. sinensis HOM05D003157 ORTHO05D004447 1.9e-24 117.1 160 43.1
Manes.06G110100 Manihot esculenta HOM05D003157 ORTHO05D004447 3.3e-24 116.3 158 45.6
Cfa019214 Carpinus fangiana HOM05D003157 ORTHO05D004447 4.3e-24 115.9 160 46.2
Dinv20600 Davidia involucrata HOM05D003157 ORTHO05D004447 7.4e-24 115.2 161 42.9
QL10p006899 Quercus lobata HOM05D003157 ORTHO05D004447 7.4e-24 115.2 161 44.7
Cc04_g11550 Coffea canephora HOM05D003157 ORTHO05D004447 2.1e-23 113.6 162 45.1
Rhsim12G0167900 Rhododendron simsii HOM05D003157 ORTHO05D004447 2.1e-23 113.6 161 39.1
Haze_07584 Corylus avellana HOM05D003157 ORTHO05D004447 3.7e-23 112.8 160 46.2
Manes.14G060700 Manihot esculenta HOM05D003157 ORTHO05D004447 3.7e-23 112.8 167 43.1
vmacro16645 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 3.7e-23 112.8 176 39.8
Lj4g0014353 Lotus japonicus HOM05D003157 ORTHO05D004447 1.4e-22 110.9 173 38.7
PSO111G0086 Papaver somniferum HOM05D003157 ORTHO05D004447 1.4e-22 110.9 155 41.3
Peaxi162Scf00089g01334 Petunia axillaris HOM05D003157 ORTHO05D004447 1.4e-22 110.9 168 43.5
PGSC0003DMG400018122 Solanum tuberosum HOM05D003157 ORTHO05D004447 1.4e-22 110.9 177 43.5
Medtr4g104880 Medicago truncatula HOM05D003157 ORTHO05D004447 1.8e-22 110.5 161 41.0
VMungo1215G0567 Vigna mungo HOM05D003157 ORTHO05D004447 2.4e-22 110.2 176 39.8
Migut.D01995 Erythranthe guttata HOM05D003157 ORTHO05D004447 4.0e-22 109.4 160 41.2
PGR044G1972 Punica granatum HOM05D003157 ORTHO05D004447 4.0e-22 109.4 162 41.4
GSVIVG01007647001 Vitis vinifera HOM05D003157 ORTHO05D004447 6.9e-22 108.6 177 41.2
MSTRG.11494 Avicennia marina HOM05D003157 ORTHO05D004447 9.0e-22 108.2 141 46.8
Sopen03g031330 Solanum pennellii HOM05D003157 ORTHO05D004447 1.2e-21 107.8 167 43.1
Atru.chr9.2575 Acer truncatum HOM05D003157 ORTHO05D004447 2.6e-21 106.7 151 45.7
Ca_14277_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 3.4e-21 106.3 161 38.5
Solyc03g112230.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 4.5e-21 105.9 166 42.2
CAN.G993.20 Capsicum annuum HOM05D003157 ORTHO05D004447 5.8e-21 105.5 173 39.3
Lalb_Chr13g0297581 Lupinus albus HOM05D003157 ORTHO05D004447 5.8e-21 105.5 135 48.1
Nitab4.5_0001793g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 7.6e-21 105.1 179 40.8
PSO754G0123 Papaver somniferum HOM05D003157 ORTHO05D004447 7.6e-21 105.1 157 43.9
Nitab4.5_0010452g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 1.0e-20 104.8 166 42.2
RcHm_v2.0_Chr7g0192591 Rosa chinensis HOM05D003157 ORTHO05D004447 1.0e-20 104.8 164 41.5
Lj9A442T64 Lonicera japonica HOM05D003157 ORTHO05D004447 1.3e-20 104.4 173 38.2
Peaxi162Scf00763g00430 Petunia axillaris HOM05D003157 ORTHO05D004447 1.7e-20 104.0 181 39.2
Glyma.17G084700 Glycine max HOM05D003157 ORTHO05D004447 2.2e-20 103.6 133 45.1
Prupe.5G165800 Prunus persica HOM05D003157 ORTHO05D004447 2.2e-20 103.6 160 41.9
AUR62028729 Chenopodium quinoa HOM05D003157 ORTHO05D004447 2.9e-20 103.2 198 39.4
CDE02G1794 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 3.8e-20 102.8 115 47.8
Lalb_Chr07g0182971 Lupinus albus HOM05D003157 ORTHO05D004447 3.8e-20 102.8 114 45.6
MD06G1165900 Malus domestica HOM05D003157 ORTHO05D004447 3.8e-20 102.8 158 40.5
CAN.G338.32 Capsicum annuum HOM05D003157 ORTHO05D004447 4.9e-20 102.4 170 41.2
Gorai.007G046900 Gossypium raimondii HOM05D003157 ORTHO05D004447 4.9e-20 102.4 174 36.8
arahy.Tifrunner.gnm1.ann1.RZMV9E Arachis hypogaea HOM05D003157 ORTHO05D004447 8.4e-20 101.7 176 39.8
EL10Ac5g10658 Beta vulgaris HOM05D003157 ORTHO05D004447 8.4e-20 101.7 193 37.3
Gohir.D11G043500 Gossypium hirsutum HOM05D003157 ORTHO05D004447 8.4e-20 101.7 174 36.8
Psat4g060880 Pisum sativum HOM05D003157 ORTHO05D004447 8.4e-20 101.7 172 38.4
Gohir.A11G040300 Gossypium hirsutum HOM05D003157 ORTHO05D004447 1.1e-19 101.3 174 36.8
MSTRG.9691 Avicennia marina HOM05D003157 ORTHO05D004447 1.4e-19 100.9 165 40.6
Zm00001eb245950 Zea mays HOM05D003157 ORTHO05D004447 1.9e-19 100.5 97 50.5
AUR62008147 Chenopodium quinoa HOM05D003157 ORTHO05D004447 4.2e-19 99.4 194 39.2
ECA232G3241 Erigeron canadensis HOM05D003157 ORTHO05D004447 4.2e-19 99.4 196 35.2
Lj5A130T68 Lonicera japonica HOM05D003157 ORTHO05D004447 4.2e-19 99.4 129 46.5
TPR.G37494 Trifolium pratense HOM05D003157 ORTHO05D004447 4.2e-19 99.4 159 37.7
Actinidia08960 Actinidia chinensis HOM05D003157 ORTHO05D004447 5.5e-19 99.0 178 40.4
Glyma.05G041600 Glycine max HOM05D003157 ORTHO05D004447 5.5e-19 99.0 135 41.5
Rhsim08G0177500 Rhododendron simsii HOM05D003157 ORTHO05D004447 5.5e-19 99.0 157 39.5
Aqoxy3G02978 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 7.1e-19 98.6 85 56.5
Eucgr.K02800 Eucalyptus grandis HOM05D003157 ORTHO05D004447 7.1e-19 98.6 164 39.6
Os02g0593700 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 7.1e-19 98.6 111 43.2
CDE04G2303 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 9.3e-19 98.2 129 43.4
Nitab4.5_0008713g0020 Nicotiana tabacum HOM05D003157 ORTHO05D004447 1.2e-18 97.8 159 38.4
FvH4_5g06270 Fragaria vesca HOM05D003157 ORTHO05D004447 1.6e-18 97.4 161 40.4
TAR622G1022 Trochodendron aralioides HOM05D003157 ORTHO05D004447 1.6e-18 97.4 114 47.4
arahy.Tifrunner.gnm1.ann1.UDW2C6 Arachis hypogaea HOM05D003157 ORTHO05D004447 2.1e-18 97.1 177 38.4
Thecc.03G025700 Theobroma cacao HOM05D003157 ORTHO05D004447 2.1e-18 97.1 159 40.9
Nitab4.5_0000003g0820 Nicotiana tabacum HOM05D003157 ORTHO05D004447 3.5e-18 96.3 159 39.0
Phvul.003G205000 Phaseolus vulgaris HOM05D003157 ORTHO05D004447 3.5e-18 96.3 176 37.5
FAN13G0746 Fragaria x ananassa HOM05D003157 ORTHO05D004447 4.6e-18 95.9 161 41.6
SalBow6G1229 Salvia bowleyana HOM05D003157 ORTHO05D004447 4.6e-18 95.9 158 39.9
Ciclev10024152m.g Citrus clementina HOM05D003157 ORTHO05D004447 6.0e-18 95.5 167 38.9
DCAR_021588 Daucus carota HOM05D003157 ORTHO05D004447 6.0e-18 95.5 127 44.9
MD14G1171800 Malus domestica HOM05D003157 ORTHO05D004447 6.0e-18 95.5 94 51.1
Dinv38527 Davidia involucrata HOM05D003157 ORTHO05D004447 7.9e-18 95.1 155 40.6
FAN04G1965 Fragaria x ananassa HOM05D003157 ORTHO05D004447 7.9e-18 95.1 160 40.6
Gohir.A03G056900 Gossypium hirsutum HOM05D003157 ORTHO05D004447 7.9e-18 95.1 159 39.0
PGSC0003DMG400027073 Solanum tuberosum HOM05D003157 ORTHO05D004447 7.9e-18 95.1 127 41.7
vmacro19300 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 7.9e-18 95.1 159 37.1
Lsat_1_v5_gn_4_77240 Lactuca sativa HOM05D003157 ORTHO05D004447 1.0e-17 94.7 75 60.0
FAN18G2672 Fragaria x ananassa HOM05D003157 ORTHO05D004447 1.3e-17 94.4 158 39.9
FAN08G1011 Fragaria x ananassa HOM05D003157 ORTHO05D004447 1.8e-17 94.0 171 35.7
Gorai.003G115800 Gossypium raimondii HOM05D003157 ORTHO05D004447 1.8e-17 94.0 161 38.5
Sabra15G0107200 Salix brachista HOM05D003157 ORTHO05D004447 1.8e-17 94.0 165 39.4
unitig_37.g12746 Utricularia gibba HOM05D003157 ORTHO05D004447 1.8e-17 94.0 164 37.8
Sopen06g028060 Solanum pennellii HOM05D003157 ORTHO05D004447 3.0e-17 93.2 169 36.1
HanXRQChr10g0296081 Helianthus annuus HOM05D003157 ORTHO05D004447 3.9e-17 92.8 152 39.5
Gohir.D03G106700 Gossypium hirsutum HOM05D003157 ORTHO05D004447 8.7e-17 91.7 161 37.9
Solyc06g071770.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 8.7e-17 91.7 169 35.5
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 1.5e-16 90.9 134 40.3
Potri.012G085700 Populus trichocarpa HOM05D003157 ORTHO05D004447 1.9e-16 90.5 166 38.0
DCAR_016024 Daucus carota HOM05D003157 ORTHO05D004447 2.5e-16 90.1 174 33.9
HanXRQChr16g0504701 Helianthus annuus HOM05D003157 ORTHO05D004447 2.5e-16 90.1 150 33.3
Potri.015G084000 Populus trichocarpa HOM05D003157 ORTHO05D004447 2.5e-16 90.1 165 37.6
BcaC07g38161 Brassica carinata HOM05D003157 ORTHO05D004447 3.3e-16 89.7 106 44.3
ClCG01G013500 Citrullus lanatus HOM05D003157 ORTHO05D004447 3.3e-16 89.7 77 55.8
COL.COLO4_36761 Corchorus olitorius HOM05D003157 ORTHO05D004447 4.3e-16 89.4 94 53.2
Sabra12G0061600 Salix brachista HOM05D003157 ORTHO05D004447 7.4e-16 88.6 160 35.6
HPP92_006279 Vanilla planifolia HOM05D003157 ORTHO05D004447 1.3e-15 87.8 119 38.7
HPP92_024706 Vanilla planifolia HOM05D003157 ORTHO05D004447 1.3e-15 87.8 166 35.5
BolC8t48585H Brassica oleracea HOM05D003157 ORTHO05D004447 1.6e-15 87.4 159 35.8
DCAR_026172 Daucus carota HOM05D003157 ORTHO05D004447 1.6e-15 87.4 76 50.0
THA.LOC104825177 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 2.1e-15 87.0 115 42.6
ClCG03G002990 Citrullus lanatus HOM05D003157 ORTHO05D004447 2.8e-15 86.7 75 54.7
Sed0026079 Sechium edule HOM05D003157 ORTHO05D004447 2.8e-15 86.7 184 33.7
TWI14G1342 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 3.7e-15 86.3 111 40.5
TWI23G0818 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 3.7e-15 86.3 168 33.9
SGA_v2.0_scaffold7G04161 Striga asiatica HOM05D003157 ORTHO05D004447 6.3e-15 85.5 107 45.8
A08p21390 Brassica napus HOM05D003157 ORTHO05D004447 8.2e-15 85.1 105 41.0
MELO3C002297.2 Cucumis melo HOM05D003157 ORTHO05D004447 2.4e-14 83.6 77 53.2
Ah.11g051160 Amaranthus hybridus HOM05D003157 ORTHO05D004447 3.1e-14 83.2 153 37.3
BraA08t34089Z Brassica rapa HOM05D003157 ORTHO05D004447 3.1e-14 83.2 105 41.0
Os04g0476800 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 3.1e-14 83.2 111 36.9
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 5.3e-14 82.4 103 43.7
Potri.012G085450 Populus trichocarpa HOM05D003157 ORTHO05D004447 1.2e-13 81.3 82 47.6
CsaV3_1G008830 Cucumis sativus L. HOM05D003157 ORTHO05D004447 1.5e-13 80.9 77 53.2
Sed0005003 Sechium edule HOM05D003157 ORTHO05D004447 1.5e-13 80.9 85 43.5
Hund02785 Selenicereus undatus HOM05D003157 ORTHO05D004447 1.5e-13 80.9 58 60.3
Lalb_Chr12g0201891 Lupinus albus HOM05D003157 ORTHO05D004447 2.0e-13 80.5 158 36.1
CARHR232070 Cardamine hirsuta HOM05D003157 ORTHO05D004447 2.6e-13 80.1 125 38.4
SEGI_11452 Sequoiadendron giganteum HOM05D003157 ORTHO05D004447 4.5e-13 79.3 60 56.7
Sc12g0005010 Simmondsia chinensis HOM05D003157 ORTHO05D004447 4.5e-13 79.3 115 40.0
THA.LOC104809775 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 1.0e-12 78.2 121 38.8
Carub.0007s1637 Capsella rubella HOM05D003157 ORTHO05D004447 1.3e-12 77.8 94 40.4
CiPaw.11G019800 Carya illinoinensis HOM05D003157 ORTHO05D004447 1.3e-12 77.8 146 36.3
Sp7g22680 Schrenkiella parvula HOM05D003157 ORTHO05D004447 2.2e-12 77.0 78 46.2
Cpa.g.sc159.27 Carica papaya HOM05D003157 ORTHO05D004447 2.9e-12 76.6 99 44.4
AT4G24690 Arabidopsis thaliana HOM05D003157 ORTHO05D004447 5.0e-12 75.9 82 42.7
BcaC09g50840 Brassica carinata HOM05D003157 ORTHO05D004447 5.0e-12 75.9 78 43.6
C01p20020 Brassica napus HOM05D003157 ORTHO05D004447 5.0e-12 75.9 78 43.6
CANSAT80G2678 Cannabis sativa HOM05D003157 ORTHO05D004447 5.0e-12 75.9 93 41.9
Thhalv10024557m.g Eutrema salsugineum HOM05D003157 ORTHO05D004447 5.0e-12 75.9 56 53.6
SHI17273 Sapria himalayana HOM05D003157 ORTHO05D004447 5.0e-12 75.9 54 64.8
AL7G28510 Arabidopsis lyrata HOM05D003157 ORTHO05D004447 6.5e-12 75.5 82 42.7
BraA01t01537Z Brassica rapa HOM05D003157 ORTHO05D004447 1.1e-11 74.7 78 43.6
A03p55470 Brassica napus HOM05D003157 ORTHO05D004447 1.4e-11 74.3 76 44.7
SGA_v2.0_scaffold114G31812 Striga asiatica HOM05D003157 ORTHO05D004447 1.9e-11 73.9 135 39.3
C07p53750 Brassica napus HOM05D003157 ORTHO05D004447 2.5e-11 73.6 76 44.7
BolC7t45866H Brassica oleracea HOM05D003157 ORTHO05D004447 2.5e-11 73.6 76 44.7
Aa31LG4G9790 Aethionema arabicum HOM05D003157 ORTHO05D004447 3.2e-11 73.2 79 46.8
Migut.O00156 Erythranthe guttata HOM05D003157 ORTHO05D004447 3.2e-11 73.2 75 44.0
BraA03t14620Z Brassica rapa HOM05D003157 ORTHO05D004447 7.2e-11 72.0 76 43.4
A01p16030 Brassica napus HOM05D003157 ORTHO05D004447 1.6e-10 70.9 74 43.2
ATR0824G119 Amborella trichopoda HOM05D003157 ORTHO05D004447 2.1e-10 70.5 156 29.5
BolC1t01929H Brassica oleracea HOM05D003157 ORTHO05D004447 2.1e-10 70.5 59 49.2
BcaC06g32868 Brassica carinata HOM05D003157 ORTHO05D004447 6.1e-10 68.9 81 42.0
CBR_g19475 Chara braunii HOM05D003157 ORTHO05D004447 2.3e-09 67.0 53 50.9
Psat2g093280 Pisum sativum HOM05D002199 ORTHO05D007829 2.3e-09 67.0 42 66.7
COL.COLO4_24272 Corchorus olitorius HOM05D003157 ORTHO05D004447 3.0e-09 66.6 55 45.5
Pp3c7_8990 Physcomitrium patens HOM05D003157 ORTHO05D004447 3.9e-09 66.2 54 50.0
Mapoly0100s0042 Marchantia polymorpha HOM05D003157 ORTHO05D004447 5.1e-09 65.9 53 52.8
Pp3c11_16970 Physcomitrium patens HOM05D003157 ORTHO05D004447 4.3e-08 62.8 158 27.2
Migut.O00157 Erythranthe guttata HOM05D003157 ORTHO05D004447 5.7e-08 62.4 57 42.1
Oeu023452.2 Olea europaea HOM05D003157 ORTHO05D004447 9.7e-08 61.6 111 36.9
Migut.K00603 Erythranthe guttata HOM05D003157 ORTHO05D004447 2.8e-07 60.1 56 41.1
SMO132G0003 Selaginella moellendorffii HOM05D003157 ORTHO05D004447 2.8e-07 60.1 55 49.1
AagrBONN_evm.TU.Sc2ySwM_228.5109 Anthoceros agrestis HOM05D003157 ORTHO05D004447 8.2e-07 58.5 53 47.2
PSO017G1918 Papaver somniferum HOM05D003157 ORTHO05D004447 2.4e-06 57.0 124 36.3
SGA_v2.0_scaffold25G10800 Striga asiatica HOM05D003157 ORTHO05D004447 5.3e-06 55.8 55 38.2


User provided reference genes

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