Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03135 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 1.0e-218 763.1 372 100.0
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 2.5e-164 582.4 412 69.7
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 1.3e-160 570.1 383 69.5
GSVIVG01009836001 Vitis vinifera HOM05D005790 ORTHO05D007464 9.0e-159 563.9 376 69.7
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 1.2e-158 563.5 375 72.0
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 3.8e-157 558.5 360 73.6
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 6.7e-154 547.7 384 68.0
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 8.2e-152 540.8 392 68.4
Actinidia37976 Actinidia chinensis HOM05D005790 ORTHO05D007464 2.4e-151 539.3 382 67.8
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 5.3e-151 538.1 369 68.8
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 1.1e-148 530.4 380 66.8
Ciclev10008674m.g Citrus clementina HOM05D005790 ORTHO05D007464 1.4e-148 530.0 369 69.1
Cc10_g02010 Coffea canephora HOM05D005790 ORTHO05D007464 4.2e-148 528.5 372 68.3
Aqoxy4G01228 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 5.5e-148 528.1 261 97.7
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 7.2e-148 527.7 384 66.4
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 1.2e-147 526.9 395 66.3
vmacro21704 Vaccinium macrocarpon HOM05D005790 ORTHO05D007464 7.9e-147 524.2 395 64.3
Sopen11g005650 Solanum pennellii HOM05D005790 ORTHO05D007464 1.4e-146 523.5 380 65.8
Solyc11g010910.3 Solanum lycopersicum HOM05D005790 ORTHO05D007464 2.3e-146 522.7 380 65.8
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 6.7e-146 521.2 383 65.3
CiPaw.07G153400 Carya illinoinensis HOM05D005790 ORTHO05D007464 1.1e-145 520.4 383 66.3
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 1.1e-145 520.4 394 64.2
PGSC0003DMG400016117 Solanum tuberosum HOM05D005790 ORTHO05D007464 1.5e-145 520.0 371 66.8
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 7.4e-145 517.7 450 59.1
Gohir.A06G005800 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.8e-144 515.8 389 65.3
FvH4_2g39120 Fragaria vesca HOM05D005790 ORTHO05D007464 2.4e-143 512.7 391 63.7
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 4.1e-143 511.9 391 63.9
Gorai.010G006000 Gossypium raimondii HOM05D005790 ORTHO05D007464 3.4e-142 508.8 389 64.5
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 3.4e-142 508.8 395 63.5
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 7.7e-142 507.7 388 63.1
Gohir.D06G001600 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.2e-141 506.1 389 64.0
TWI36G0257 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 6.5e-141 504.6 401 61.8
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 8.5e-141 504.2 381 61.9
AUR62019151 Chenopodium quinoa HOM05D005790 ORTHO05D007464 1.4e-140 503.4 384 63.0
ECA247G0379 Erigeron canadensis HOM05D005790 ORTHO05D007464 5.5e-140 501.5 378 63.5
FAN20G0385 Fragaria x ananassa HOM05D005790 ORTHO05D007464 9.4e-140 500.7 396 61.9
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 2.7e-139 499.2 375 63.5
Sc02g0005160 Simmondsia chinensis HOM05D005790 ORTHO05D007464 4.7e-139 498.4 380 64.5
AL7G22390 Arabidopsis lyrata HOM05D005790 ORTHO05D007464 7.9e-139 497.7 376 61.7
AUR62014415 Chenopodium quinoa HOM05D005790 ORTHO05D007464 7.9e-139 497.7 411 59.6
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 7.9e-139 497.7 381 64.8
EL10Ac1g00445 Beta vulgaris HOM05D005790 ORTHO05D007464 1.0e-138 497.3 386 62.4
CARHR237760 Cardamine hirsuta HOM05D005790 ORTHO05D007464 1.0e-138 497.3 376 63.3
Eucgr.J01034 Eucalyptus grandis HOM05D005790 ORTHO05D007464 3.0e-138 495.7 378 63.8
Lsat_1_v5_gn_1_16241 Lactuca sativa HOM05D005790 ORTHO05D007464 3.9e-138 495.4 381 62.7
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 5.2e-138 495.0 379 62.8
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 5.2e-138 495.0 381 60.1
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 8.8e-138 494.2 379 62.5
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 1.1e-137 493.8 380 64.2
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 1.5e-137 493.4 364 62.4
Nn5g29250 Nelumbo nucifera HOM05D005790 ORTHO05D007464 1.5e-137 493.4 375 64.8
AT4G29860 Arabidopsis thaliana HOM05D005790 ORTHO05D007464 2.0e-137 493.0 376 62.8
Carub.0004s1477 Capsella rubella HOM05D005790 ORTHO05D007464 3.3e-137 492.3 376 62.5
Sp7g27670 Schrenkiella parvula HOM05D005790 ORTHO05D007464 5.7e-137 491.5 376 62.0
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 2.2e-136 489.6 466 54.7
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 4.8e-136 488.4 407 60.7
MSTRG.18414 Avicennia marina HOM05D005790 ORTHO05D007464 1.4e-135 486.9 363 63.9
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 1.4e-135 486.9 410 60.0
Thhalv10025433m.g Eutrema salsugineum HOM05D005790 ORTHO05D007464 1.8e-135 486.5 376 60.4
FAN15G2431 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.8e-135 486.5 430 57.2
FAN20G1847 Fragaria x ananassa HOM05D005790 ORTHO05D007464 4.1e-135 485.3 425 57.6
DCAR_017500 Daucus carota HOM05D005790 ORTHO05D007464 3.5e-134 482.3 385 62.3
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 7.7e-134 481.1 363 61.2
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 1.3e-133 480.3 354 65.5
BraA01t00778Z Brassica rapa HOM05D005790 ORTHO05D007464 2.9e-133 479.2 378 61.6
A01p08300 Brassica napus HOM05D005790 ORTHO05D007464 6.5e-133 478.0 378 60.8
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 7.2e-132 474.6 381 58.8
C01p09340 Brassica napus HOM05D005790 ORTHO05D007464 1.2e-131 473.8 378 60.3
BolC1t00922H Brassica oleracea HOM05D005790 ORTHO05D007464 1.2e-131 473.8 378 60.3
Peaxi162Scf00085g00528 Petunia axillaris HOM05D005790 ORTHO05D007464 2.7e-131 472.6 373 63.0
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 2.7e-131 472.6 381 58.3
ATR0945G002 Amborella trichopoda HOM05D005790 ORTHO05D007464 1.4e-130 470.3 405 58.8
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 6.7e-130 468.0 494 50.6
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 1.5e-129 466.8 355 65.6
SHI02412 Sapria himalayana HOM05D005790 ORTHO05D007464 5.3e-127 458.4 381 57.7
HanXRQChr02g0043921 Helianthus annuus HOM05D005790 ORTHO05D007464 9.1e-127 457.6 361 62.0
Zm00001eb378230 Zea mays HOM05D005790 ORTHO05D007464 2.7e-126 456.1 385 54.8
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 6.5e-125 451.4 391 59.3
SGA_v2.0_scaffold8G04609 Striga asiatica HOM05D005790 ORTHO05D007464 2.5e-124 449.5 363 61.2
Os06g0131100 Oryza sativa ssp. japonica HOM05D005790 ORTHO05D007464 1.0e-122 444.1 371 56.1
unitig_26.g10135 Utricularia gibba HOM05D005790 ORTHO05D007464 6.8e-122 441.4 359 57.9
THA.LOC104811397 Tarenaya hassleriana HOM05D005790 ORTHO05D007464 2.4e-119 433.0 385 54.8
Lj4A790T66 Lonicera japonica HOM05D005790 ORTHO05D007464 2.7e-118 429.5 302 69.2
Migut.D00577 Erythranthe guttata HOM05D005790 ORTHO05D007464 4.5e-118 428.7 363 58.1
Atru.BG.234.p Acer truncatum HOM05D005790 ORTHO05D007464 2.1e-115 419.9 360 60.8
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 3.4e-113 412.5 503 47.1
CsaV3_UNG233270 Cucumis sativus L. HOM05D005790 ORTHO05D007464 2.8e-112 409.5 383 56.7
Ah.05g171860 Amaranthus hybridus HOM05D005790 ORTHO05D007464 8.6e-101 371.3 324 55.6
FAN27G0896 Fragaria x ananassa HOM05D005790 ORTHO05D007464 6.6e-93 345.1 420 46.4
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 2.5e-92 343.2 233 70.4
SMO147G0253 Selaginella moellendorffii HOM05D005790 ORTHO05D007464 4.7e-91 339.0 377 48.5
Mapoly0014s0217 Marchantia polymorpha HOM05D005790 ORTHO05D007464 1.5e-84 317.4 361 45.4
Aa31LG4G5850 Aethionema arabicum HOM05D005790 ORTHO05D007464 3.5e-78 296.2 290 52.8
Pp3c20_12860 Physcomitrium patens HOM05D005790 ORTHO05D007464 2.5e-76 290.0 366 42.1
SalBow1G3128 Salvia bowleyana HOM05D005790 ORTHO05D007464 1.2e-75 287.7 220 60.9
TPR.G30295 Trifolium pratense HOM05D005790 ORTHO05D007464 1.4e-71 274.2 170 71.2
Oeu061776.2 Olea europaea HOM05D005790 ORTHO05D000708 3.2e-71 273.1 320 47.8
Nitab4.5_0000402g0120 Nicotiana tabacum HOM05D005790 ORTHO05D007464 7.1e-71 271.9 231 58.0
CDE05G1328 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 2.7e-70 270.0 168 73.8
Actinidia29793 Actinidia chinensis HOM05D005790 ORTHO05D007464 5.1e-69 265.8 391 44.8
Psat5g014800 Pisum sativum HOM05D005790 ORTHO05D007464 1.2e-65 254.6 216 56.9
MBI09_g08426_MAGBIO Magnolia biondii HOM05D005790 ORTHO05D007464 5.4e-63 245.7 371 43.1
RcHm_v2.0_Chr6g0302231 Rosa chinensis HOM05D005790 ORTHO05D007464 2.3e-61 240.4 246 50.8
Hund17229 Selenicereus undatus HOM05D005790 ORTHO05D007464 1.3e-59 234.6 146 71.2
Psat5g014760 Pisum sativum HOM05D005790 ORTHO05D007464 1.9e-55 220.7 139 68.3
RcHm_v2.0_Chr4g0408871 Rosa chinensis HOM05D005790 ORTHO05D007464 3.9e-53 213.0 369 37.9
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 6.9e-50 202.2 214 46.3
Cpa.g.sc140.27 Carica papaya HOM05D005790 ORTHO05D007464 2.6e-49 200.3 145 63.4
Nitab4.5_0000402g0130 Nicotiana tabacum HOM05D005790 ORTHO05D007464 1.0e-48 198.4 121 76.0
TWI36G0035 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 4.2e-47 193.0 138 64.5
CBR_g24442 Chara braunii HOM05D005790 ORTHO05D007464 2.7e-46 190.3 212 46.2
Gorai.010G006300 Gossypium raimondii HOM05D005790 ORTHO05D007464 6.7e-45 185.7 114 73.7
TPR.G30287 Trifolium pratense HOM05D005790 ORTHO05D007464 6.3e-43 179.1 148 54.7
SEGI_31412 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 2.0e-41 174.1 253 39.1
AagrBONN_evm.TU.Sc2ySwM_369.164 Anthoceros agrestis HOM05D005790 ORTHO05D007464 5.9e-41 172.6 271 39.1
Aa31LG4G5860 Aethionema arabicum HOM05D005790 ORTHO05D007464 1.6e-38 164.5 94 73.4
Cre02.g076850 Chlamydomonas reinhardtii HOM05D005790 ORTHO05D007464 2.0e-33 147.5 429 27.0
RcHm_v2.0_Chr6g0302371 Rosa chinensis HOM05D005790 ORTHO05D007464 2.9e-32 143.7 180 46.1
Lj4C790T17 Lonicera japonica HOM05D005790 ORTHO05D007464 5.7e-28 129.4 74 74.3
MD15G1017900 Malus domestica HOM05D005790 ORTHO05D007464 7.4e-28 129.0 217 38.2
MD15G1018000 Malus domestica HOM05D005790 ORTHO05D007464 7.4e-28 129.0 217 38.2
Cfa025606 Carpinus fangiana HOM05D005790 ORTHO05D007464 1.3e-27 128.3 359 30.6
HPP92_020941 Vanilla planifolia HOM05D005790 ORTHO05D007464 2.4e-26 124.0 124 50.8
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 5.0e-24 116.3 413 28.6
MCO14G170 Micromonas commoda HOM05D005790 ORTHO05D007464 6.5e-24 115.9 448 26.6
TAR625G0591 Trochodendron aralioides HOM05D000460 ORTHO05D000333 2.6e-20 104.0 200 38.5
Cpa.g.sc140.30 Carica papaya HOM05D005790 ORTHO05D007464 1.2e-17 95.1 54 77.8
RcHm_v2.0_Chr6g0302301 Rosa chinensis HOM05D005790 ORTHO05D007464 1.3e-16 91.7 55 69.1
SEGI_12232 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 2.9e-16 90.5 60 61.7
HPP92_020940 Vanilla planifolia HOM05D005790 ORTHO05D007464 1.2e-14 85.1 55 69.1
CDE05G1505 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 8.2e-11 72.4 53 66.0
Hma1.2p1_1776F.1_g301940 Hydrangea macrophylla HOM05D005790 ORTHO05D007464 2.4e-10 70.9 41 75.6
COL.COLO4_38433 Corchorus olitorius HOM05D005790 ORTHO05D030850 9.4e-07 58.9 40 57.5
Aqoxy4G00646 Aquilegia oxysepala HOM05D002561 ORTHO05D006466 2.1e-06 57.8 349 22.1
CDE03G0236 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 4.7e-06 56.6 355 22.5
ECA246G1387 Erigeron canadensis HOM05D006809 ORTHO05D008609 8.0e-06 55.8 166 22.3


User provided reference genes

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