Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03049 Aquilegia oxysepala HOM05D002009 ORTHO05D006831 7.8e-97 357.1 173 100.0
Aqoxy2G03070 Aquilegia oxysepala HOM05D002009 ORTHO05D006831 7.8e-97 357.1 173 100.0
PSO210G3028 Papaver somniferum HOM05D002009 ORTHO05D006831 6.6e-72 274.2 173 72.3
Dinv40301 Davidia involucrata HOM05D002009 ORTHO05D006831 1.1e-71 273.5 173 73.4
Potri.013G022200 Populus trichocarpa HOM05D002009 ORTHO05D006831 7.3e-71 270.8 173 72.8
Atru.chr2.372 Acer truncatum HOM05D002009 ORTHO05D006831 4.8e-70 268.1 173 71.7
PSO170G1195 Papaver somniferum HOM05D002009 ORTHO05D006831 4.8e-70 268.1 173 70.5
Hma1.2p1_1077F.1_g254700 Hydrangea macrophylla HOM05D002009 ORTHO05D006831 2.4e-69 265.8 173 70.5
Sabra13G0024400 Salix brachista HOM05D002009 ORTHO05D006831 3.1e-69 265.4 173 72.3
Nn3g21358 Nelumbo nucifera HOM05D002009 ORTHO05D006831 4.0e-69 265.0 173 72.3
Ciclev10003639m.g Citrus clementina HOM05D002009 ORTHO05D006831 5.3e-69 264.6 173 71.7
QL03p007353 Quercus lobata HOM05D002009 ORTHO05D006831 5.3e-69 264.6 172 70.9
QL03p007751 Quercus lobata HOM05D002009 ORTHO05D006831 5.3e-69 264.6 172 70.9
GSVIVG01000087001 Vitis vinifera HOM05D002009 ORTHO05D006831 6.9e-69 264.2 173 71.1
Actinidia23644 Actinidia chinensis HOM05D002009 ORTHO05D006831 1.2e-68 263.5 173 69.4
ECA236G3568 Erigeron canadensis HOM05D002009 ORTHO05D006831 1.2e-68 263.5 174 70.1
Migut.N02070 Erythranthe guttata HOM05D002009 ORTHO05D006831 1.5e-68 263.1 174 70.1
Gorai.004G241000 Gossypium raimondii HOM05D002009 ORTHO05D006831 3.4e-68 261.9 173 70.5
Gohir.D08G227001 Gossypium hirsutum HOM05D002009 ORTHO05D006831 9.9e-68 260.4 173 69.9
Gohir.A08G210100 Gossypium hirsutum HOM05D002009 ORTHO05D006831 1.7e-67 259.6 173 69.9
CSS0006817 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 2.2e-67 259.2 172 70.9
CSS0012384 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 2.2e-67 259.2 172 70.9
CAN.G1034.31 Capsicum annuum HOM05D002009 ORTHO05D006831 2.9e-67 258.8 173 68.8
MD12G1217900 Malus domestica HOM05D002009 ORTHO05D006831 3.8e-67 258.5 173 67.1
Prupe.6G324000 Prunus persica HOM05D002009 ORTHO05D006831 4.9e-67 258.1 173 68.2
RcHm_v2.0_Chr3g0455131 Rosa chinensis HOM05D002009 ORTHO05D006831 4.9e-67 258.1 172 68.6
Peaxi162Scf00037g00637 Petunia axillaris HOM05D002009 ORTHO05D006831 6.4e-67 257.7 173 65.9
vmacro04830 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 6.4e-67 257.7 185 65.9
vmacro04986 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 6.4e-67 257.7 185 65.9
Sopen01g042770 Solanum pennellii HOM05D002009 ORTHO05D006831 8.4e-67 257.3 173 67.6
Thecc.05G301300 Theobroma cacao HOM05D002009 ORTHO05D006831 8.4e-67 257.3 173 69.9
Lj9C89G5 Lonicera japonica HOM05D002009 ORTHO05D006831 2.4e-66 255.8 175 67.4
Manes.09G167800 Manihot esculenta HOM05D002009 ORTHO05D006831 2.4e-66 255.8 170 70.0
Oeu002661.1 Olea europaea HOM05D002009 ORTHO05D006831 3.2e-66 255.4 174 68.4
MSTRG.27991 Avicennia marina HOM05D002009 ORTHO05D006831 7.1e-66 254.2 171 69.0
FAN02G0878 Fragaria x ananassa HOM05D002009 ORTHO05D006831 1.6e-65 253.1 172 67.4
SGA_v2.0_scaffold80G25788 Striga asiatica HOM05D002009 ORTHO05D006831 1.6e-65 253.1 173 67.1
FvH4_6g06120 Fragaria vesca HOM05D002009 ORTHO05D006831 2.7e-65 252.3 172 67.4
FAN14G2713 Fragaria x ananassa HOM05D002009 ORTHO05D006831 2.7e-65 252.3 172 67.4
Hund07076 Selenicereus undatus HOM05D002009 ORTHO05D006831 3.5e-65 251.9 173 68.2
Cpa.g.sc48.68 Carica papaya HOM05D002009 ORTHO05D006831 7.9e-65 250.8 173 68.2
TWI36G1702 Tripterygium wilfordii HOM05D002009 ORTHO05D006831 7.9e-65 250.8 173 66.5
AUR62005157 Chenopodium quinoa HOM05D002009 ORTHO05D006831 1.3e-64 250.0 173 65.9
FAN09G2733 Fragaria x ananassa HOM05D002009 ORTHO05D006831 3.0e-64 248.8 172 66.3
AUR62000811 Chenopodium quinoa HOM05D002009 ORTHO05D006831 3.9e-64 248.4 173 65.3
CANSAT54G3017 Cannabis sativa HOM05D002009 ORTHO05D006831 5.1e-64 248.1 170 67.6
Cc02_g33310 Coffea canephora HOM05D002009 ORTHO05D006831 5.1e-64 248.1 173 64.7
DCAR_001814 Daucus carota HOM05D002009 ORTHO05D006831 5.1e-64 248.1 173 67.6
HanXRQChr15g0469941 Helianthus annuus HOM05D002009 ORTHO05D006831 5.1e-64 248.1 174 64.9
FAN05G0625 Fragaria x ananassa HOM05D002009 ORTHO05D006831 6.7e-64 247.7 167 68.3
EL10Ac4g09369 Beta vulgaris HOM05D002009 ORTHO05D006831 1.5e-63 246.5 174 66.7
Haze_04184 Corylus avellana HOM05D002009 ORTHO05D006831 1.5e-63 246.5 174 68.4
Sc09g0003130 Simmondsia chinensis HOM05D002009 ORTHO05D006831 2.5e-63 245.7 173 65.3
arahy.Tifrunner.gnm1.ann1.V7WSHY Arachis hypogaea HOM05D002009 ORTHO05D006831 3.3e-63 245.4 173 65.9
arahy.Tifrunner.gnm1.ann1.UY60S3 Arachis hypogaea HOM05D002009 ORTHO05D006831 4.3e-63 245.0 173 66.5
Eucgr.B01945 Eucalyptus grandis HOM05D002009 ORTHO05D006831 5.6e-63 244.6 173 65.9
THA.LOC104823729 Tarenaya hassleriana HOM05D002009 ORTHO05D006831 2.8e-62 242.3 174 64.4
Ca_05812_v3 Cicer arietinum L. HOM05D002009 ORTHO05D006831 4.8e-62 241.5 173 65.9
Medtr7g113380 Medicago truncatula HOM05D002009 ORTHO05D006831 4.8e-62 241.5 173 65.3
Ah.04g160310 Amaranthus hybridus HOM05D002009 ORTHO05D006831 8.1e-62 240.7 173 64.7
Lsat_1_v5_gn_9_86800 Lactuca sativa HOM05D002009 ORTHO05D006831 1.1e-61 240.4 176 63.6
Sp5g22500 Schrenkiella parvula HOM05D002009 ORTHO05D006831 1.1e-61 240.4 173 62.4
Psat0s2197g0160 Pisum sativum HOM05D002009 ORTHO05D006831 1.8e-61 239.6 173 64.7
AT1G67500 Arabidopsis thaliana HOM05D002009 ORTHO05D006831 3.1e-61 238.8 173 61.8
CARHR060080 Cardamine hirsuta HOM05D002009 ORTHO05D006831 4.0e-61 238.4 173 61.8
Aa31LG2G11690 Aethionema arabicum HOM05D000208 ORTHO05D006831 6.9e-61 237.7 175 62.3
Thhalv10017996m.g Eutrema salsugineum HOM05D002009 ORTHO05D006831 6.9e-61 237.7 173 61.8
Rhsim12G0060600 Rhododendron simsii HOM05D002009 ORTHO05D006831 6.9e-61 237.7 160 70.6
ATR0706G256 Amborella trichopoda HOM05D002009 ORTHO05D006831 9.0e-61 237.3 181 63.0
Phvul.006G091300 Phaseolus vulgaris HOM05D002009 ORTHO05D006831 9.0e-61 237.3 173 64.2
CiPaw.07G018700 Carya illinoinensis HOM05D002009 ORTHO05D006831 2.6e-60 235.7 176 64.2
Lalb_Chr18g0045671 Lupinus albus HOM05D002009 ORTHO05D006831 2.6e-60 235.7 173 61.3
Lju1040C0G1 Lonicera japonica HOM05D002009 ORTHO05D006831 4.5e-60 235.0 172 64.5
VMungo0540G0763 Vigna mungo HOM05D002009 ORTHO05D006831 1.0e-59 233.8 173 63.6
Glyma.03G237200 Glycine max HOM05D002009 ORTHO05D006831 1.3e-59 233.4 173 63.0
AL2G26100 Arabidopsis lyrata HOM05D002009 ORTHO05D006831 3.8e-59 231.9 173 59.5
BcaB03g15362 Brassica carinata HOM05D002009 ORTHO05D006831 3.8e-59 231.9 173 62.4
Lj1g0026508 Lotus japonicus HOM05D002009 ORTHO05D006831 4.9e-59 231.5 173 63.0
Carub.0002s1383 Capsella rubella HOM05D002009 ORTHO05D006831 6.5e-59 231.1 173 59.5
BolC6t38955H Brassica oleracea HOM05D002009 ORTHO05D006831 1.1e-58 230.3 173 61.8
BraA07t30876Z Brassica rapa HOM05D002009 ORTHO05D006831 1.1e-58 230.3 173 61.8
A07p32520 Brassica napus HOM05D002009 ORTHO05D006831 1.9e-58 229.6 173 61.3
C06p38660 Brassica napus HOM05D002009 ORTHO05D006831 1.9e-58 229.6 173 61.3
Sed0001711 Sechium edule HOM05D002009 ORTHO05D006831 7.1e-58 227.6 173 61.3
CsaV3_2G006490 Cucumis sativus L. HOM05D002009 ORTHO05D006831 7.9e-57 224.2 173 61.3
ClCG02G015610 Citrullus lanatus HOM05D002009 ORTHO05D006831 2.5e-55 219.2 173 59.5
HPP92_001324 Vanilla planifolia HOM05D002009 ORTHO05D006831 4.3e-55 218.4 187 56.7
Zm00001eb330170 Zea mays HOM05D002009 ORTHO05D006831 1.3e-54 216.9 190 56.3
MELO3C004237.2 Cucumis melo HOM05D002009 ORTHO05D006831 3.7e-54 215.3 169 60.4
Migut.N02062 Erythranthe guttata HOM05D002009 ORTHO05D006831 1.6e-49 199.9 137 67.2
Solyc01g099220.3 Solanum lycopersicum HOM05D002009 ORTHO05D006831 1.0e-48 197.2 135 65.9
Pp3c2_33440 Physcomitrium patens HOM05D002009 ORTHO05D006831 1.1e-47 193.7 183 50.3
Mapoly0082s0049 Marchantia polymorpha HOM05D002009 ORTHO05D006831 3.1e-45 185.7 188 48.4
TPR.G33207 Trifolium pratense HOM05D002009 ORTHO05D006831 1.5e-39 166.8 173 49.1
CBR_g26315 Chara braunii HOM05D002009 ORTHO05D006831 4.5e-36 155.2 205 39.0
SMO146G0384 Selaginella moellendorffii HOM05D002009 ORTHO05D006831 1.3e-35 153.7 170 45.9
unitig_0.g2311 Utricularia gibba HOM05D002009 ORTHO05D006831 6.5e-35 151.4 117 60.7
QL03p054396 Quercus lobata HOM05D002009 ORTHO05D006831 1.5e-31 140.2 103 65.0
SEGI_27212 Sequoiadendron giganteum HOM05D002009 ORTHO05D006831 3.1e-29 132.5 135 48.9
MCO12G390 Micromonas commoda HOM05D002009 ORTHO05D006831 2.8e-22 109.4 152 40.1
Cre09.g387400 Chlamydomonas reinhardtii HOM05D002009 ORTHO05D006831 3.1e-21 105.9 147 36.7
MD05G1054000 Malus domestica HOM05D002009 ORTHO05D006831 1.1e-18 97.4 64 67.2
PRCOL_00003841 Prasinoderma coloniale HOM05D002009 ORTHO05D006831 4.2e-18 95.5 174 32.2
MD05G1053900 Malus domestica HOM05D002009 ORTHO05D006831 3.1e-13 79.3 56 64.3
Cfa024282 Carpinus fangiana HOM05D002009 ORTHO05D006831 1.7e-11 73.6 172 26.7
AagrBONN_evm.TU.Sc2ySwM_362.1967 Anthoceros agrestis HOM05D002009 ORTHO05D006831 1.6e-09 67.0 44 68.2
Atru.chr1.2931 Acer truncatum HOM05D002009 ORTHO05D006831 4.4e-07 58.9 44 63.6
Os11g0186400 Oryza sativa ssp. japonica HOM05D002009 ORTHO05D005728 9.8e-07 57.8 153 28.1
VMungo1309G0642 Vigna mungo HOM05D002009 ORTHO05D005728 1.3e-06 57.4 153 28.1
arahy.Tifrunner.gnm1.ann1.7D624Q Arachis hypogaea HOM05D002009 ORTHO05D005728 1.7e-06 57.0 153 27.5
Sed0004291 Sechium edule HOM05D002009 ORTHO05D005728 3.7e-06 55.8 153 27.5
Gorai.013G160900 Gossypium raimondii HOM05D002009 ORTHO05D005728 4.9e-06 55.5 153 27.5
Zm00001eb201340 Zea mays HOM05D002009 ORTHO05D005728 4.9e-06 55.5 153 28.1


User provided reference genes

Program Settings