Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02870 Aquilegia oxysepala HOM05D000113 ORTHO05D006161 1.1e-167 593.2 290 100.0
TAR633G2709 Trochodendron aralioides HOM05D000113 ORTHO05D006161 1.2e-118 430.3 283 73.9
Nn5g26851 Nelumbo nucifera HOM05D000113 ORTHO05D006161 5.6e-116 421.4 282 72.3
TAR362G0332 Trochodendron aralioides HOM05D000113 ORTHO05D006161 4.2e-111 405.2 281 70.5
Hma1.2p1_0212F.1_g090260 Hydrangea macrophylla HOM05D000113 ORTHO05D006161 2.5e-108 396.0 288 67.7
MBI04_g31155_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D006161 1.3e-107 393.7 280 69.6
Actinidia25823 Actinidia chinensis HOM05D000113 ORTHO05D006161 4.8e-107 391.7 280 69.3
CSS0016737 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D006161 1.8e-106 389.8 285 67.0
Cpa.g.sc151.33 Carica papaya HOM05D000113 ORTHO05D006161 9.0e-106 387.5 286 66.8
Lj5A370T56 Lonicera japonica HOM05D000113 ORTHO05D006161 1.3e-104 383.6 280 67.5
QL12p027746 Quercus lobata HOM05D000113 ORTHO05D006161 3.8e-104 382.1 280 67.9
CiPaw.07G112500 Carya illinoinensis HOM05D000113 ORTHO05D006161 4.6e-102 375.2 283 66.8
Cfa005867 Carpinus fangiana HOM05D000113 ORTHO05D006161 1.8e-101 373.2 281 66.2
PSO675G6280 Papaver somniferum HOM05D000113 ORTHO05D006161 6.7e-101 371.3 290 63.4
Rhsim01G0287700 Rhododendron simsii HOM05D000113 ORTHO05D006161 2.2e-99 366.3 289 64.0
Cc08_g12990 Coffea canephora HOM05D000113 ORTHO05D006161 2.8e-99 365.9 280 64.3
Dinv42093 Davidia involucrata HOM05D000113 ORTHO05D006161 2.8e-99 365.9 245 73.5
Thecc.01G306300 Theobroma cacao HOM05D000113 ORTHO05D006161 4.8e-99 365.2 282 64.2
Thecc.10G083300 Theobroma cacao HOM05D000113 ORTHO05D006161 9.0e-98 360.9 282 62.8
vmacro04631 Vaccinium macrocarpon HOM05D000113 ORTHO05D006161 1.2e-97 360.5 262 68.3
Hund05453 Selenicereus undatus HOM05D000113 ORTHO05D006161 3.4e-97 359.0 284 63.0
Oeu008340.1 Olea europaea HOM05D000113 ORTHO05D006161 5.9e-97 358.2 281 63.7
Prupe.1G193500 Prunus persica HOM05D000113 ORTHO05D006161 1.0e-96 357.5 285 62.5
Duzib138G1872 Durio zibethinus HOM05D000113 ORTHO05D006161 1.3e-96 357.1 282 63.5
Gorai.001G141100 Gossypium raimondii HOM05D000113 ORTHO05D006161 1.7e-96 356.7 282 62.8
TWI59G0818 Tripterygium wilfordii HOM05D000113 ORTHO05D006161 2.9e-96 355.9 282 64.5
Gohir.D07G130400 Gossypium hirsutum HOM05D000113 ORTHO05D006161 1.4e-95 353.6 282 62.1
Lj2C1199T13 Lonicera japonica HOM05D000113 ORTHO05D006161 2.5e-95 352.8 256 68.0
Eucgr.E04059 Eucalyptus grandis HOM05D000113 ORTHO05D006161 1.2e-94 350.5 280 63.6
PSO339G3312 Papaver somniferum HOM05D000113 ORTHO05D006161 6.1e-94 348.2 285 63.5
Manes.01G223000 Manihot esculenta HOM05D000113 ORTHO05D006161 1.0e-93 347.4 278 62.9
RcHm_v2.0_Chr4g0407811 Rosa chinensis HOM05D000113 ORTHO05D006161 2.3e-93 346.3 283 63.3
Sed0026170 Sechium edule HOM05D000113 ORTHO05D006161 2.3e-93 346.3 280 62.1
EL10Ac6g14998 Beta vulgaris HOM05D000113 ORTHO05D006161 5.1e-93 345.1 283 60.4
ClCG09G005490 Citrullus lanatus HOM05D000113 ORTHO05D006161 5.1e-93 345.1 283 61.8
Gohir.A07G126300 Gossypium hirsutum HOM05D000113 ORTHO05D006161 5.1e-93 345.1 282 61.0
Peaxi162Scf00150g00139 Petunia axillaris HOM05D000113 ORTHO05D006161 6.7e-93 344.7 280 61.4
MD04G1241500 Malus domestica HOM05D000113 ORTHO05D006161 1.5e-92 343.6 274 63.1
CsaV3_7G029610 Cucumis sativus L. HOM05D000113 ORTHO05D006161 9.7e-92 340.9 285 61.1
Sopen01g039450 Solanum pennellii HOM05D000113 ORTHO05D006161 1.3e-91 340.5 283 60.8
Atru.chr5.1086 Acer truncatum HOM05D000113 ORTHO05D006161 1.7e-91 340.1 284 62.7
CSS0034422 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D006161 1.7e-91 340.1 285 61.1
Solyc01g095710.3 Solanum lycopersicum HOM05D000113 ORTHO05D006161 1.7e-91 340.1 283 60.8
CAN.G986.23 Capsicum annuum HOM05D000113 ORTHO05D006161 6.3e-91 338.2 281 60.1
MSTRG.21654 Avicennia marina HOM05D000113 ORTHO05D006161 8.2e-91 337.8 273 61.5
Sc15g0001890 Simmondsia chinensis HOM05D000113 ORTHO05D006161 1.1e-90 337.4 281 60.9
Ciclev10018519m.g Citrus clementina HOM05D000113 ORTHO05D006161 1.4e-90 337.0 271 64.6
Sc26g0003690 Simmondsia chinensis HOM05D000113 ORTHO05D006161 3.1e-90 335.9 280 60.7
PGSC0003DMG401000100 Solanum tuberosum HOM05D000113 ORTHO05D006161 4.1e-90 335.5 281 60.9
MELO3C015960.2 Cucumis melo HOM05D000113 ORTHO05D006161 5.3e-90 335.1 283 60.4
FAN11G2310 Fragaria x ananassa HOM05D000113 ORTHO05D006161 6.9e-90 334.7 284 60.9
GSVIVG01028054001 Vitis vinifera HOM05D000113 ORTHO05D006161 6.9e-90 334.7 243 67.9
PGR044G2751 Punica granatum HOM05D000113 ORTHO05D006161 2.0e-89 333.2 284 60.6
FvH4_3g40090 Fragaria vesca HOM05D000113 ORTHO05D006161 1.0e-88 330.9 280 61.4
FAN16G3510 Fragaria x ananassa HOM05D000113 ORTHO05D006161 1.7e-88 330.1 284 60.6
ATR0307G121 Amborella trichopoda HOM05D000113 ORTHO05D006161 2.9e-88 329.3 285 60.0
SalBow6G1114 Salvia bowleyana HOM05D000113 ORTHO05D006161 3.2e-87 325.9 281 56.6
Haze_04980 Corylus avellana HOM05D001493 ORTHO05D006161 4.2e-87 325.5 250 65.2
HanXRQChr04g0105431 Helianthus annuus HOM05D000113 ORTHO05D006161 9.4e-87 324.3 284 56.0
SGA_v2.0_scaffold334G49027 Striga asiatica HOM05D000113 ORTHO05D006161 2.7e-86 322.8 287 56.1
CANSAT80G0530 Cannabis sativa HOM05D000113 ORTHO05D006161 3.3e-84 315.8 288 59.0
Migut.D00126 Erythranthe guttata HOM05D000113 ORTHO05D006161 3.3e-84 315.8 285 58.6
Lalb_Chr10g0099391 Lupinus albus HOM05D000113 ORTHO05D006161 7.4e-84 314.7 294 56.8
DCAR_012372 Daucus carota HOM05D000113 ORTHO05D006161 2.2e-83 313.2 283 55.1
Glyma.01G142700 Glycine max HOM05D000113 ORTHO05D006161 2.8e-83 312.8 295 56.9
Os02g0736600 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D006161 6.3e-83 311.6 282 57.4
ECA248G0290 Erigeron canadensis HOM05D000113 ORTHO05D006161 1.4e-82 310.5 284 54.6
Ca_15122_v3 Cicer arietinum L. HOM05D000113 ORTHO05D006161 7.0e-82 308.1 295 56.3
Phvul.010G084200 Phaseolus vulgaris HOM05D000113 ORTHO05D006161 9.1e-82 307.8 293 53.9
Glyma.03G024000 Glycine max HOM05D000113 ORTHO05D006161 2.0e-81 306.6 294 56.5
VMungo0331G1928 Vigna mungo HOM05D001793 ORTHO05D006161 1.0e-80 304.3 279 54.5
arahy.Tifrunner.gnm1.ann1.SIBB7F Arachis hypogaea HOM05D000113 ORTHO05D006161 1.7e-80 303.5 282 55.3
arahy.Tifrunner.gnm1.ann1.M111ST Arachis hypogaea HOM05D000113 ORTHO05D006161 2.9e-80 302.8 297 54.2
Psat7g233480 Pisum sativum HOM05D000113 ORTHO05D006161 8.5e-80 301.2 294 55.8
unitig_22.g5234 Utricularia gibba HOM05D000113 ORTHO05D006161 8.0e-78 294.7 272 53.7
AUR62025517 Chenopodium quinoa HOM05D000113 ORTHO05D006161 1.8e-77 293.5 264 56.8
Lj2g0016628 Lotus japonicus HOM05D000113 ORTHO05D006161 4.0e-77 292.4 279 56.6
Prupe.1G445700 Prunus persica HOM05D000113 ORTHO05D006161 4.0e-77 292.4 272 57.7
AUR62008717 Chenopodium quinoa HOM05D000113 ORTHO05D006161 8.8e-77 291.2 264 56.4
Medtr4g023590 Medicago truncatula HOM05D000113 ORTHO05D006161 2.0e-76 290.0 280 55.0
TPR.G9858 Trifolium pratense HOM05D000113 ORTHO05D006161 2.6e-76 289.7 280 54.6
Medtr4g120070 Medicago truncatula HOM05D000113 ORTHO05D006161 4.4e-76 288.9 295 53.9
Lj4g0011992 Lotus japonicus HOM05D000113 ORTHO05D006161 5.7e-76 288.5 297 54.5
Lsat_1_v5_gn_3_139220 Lactuca sativa HOM05D000113 ORTHO05D006161 4.8e-75 285.4 267 52.8
FAN21G3024 Fragaria x ananassa HOM05D000113 ORTHO05D006161 9.1e-74 281.2 284 56.0
Zm00001eb253900 Zea mays HOM05D000113 ORTHO05D006161 4.5e-73 278.9 273 53.5
AL1G47770 Arabidopsis lyrata HOM05D000113 ORTHO05D006161 2.9e-72 276.2 265 53.6
SHI19097 Sapria himalayana HOM05D000113 ORTHO05D006161 5.0e-72 275.4 269 53.9
Aa31LG1G28830 Aethionema arabicum HOM05D000113 ORTHO05D006161 6.5e-72 275.0 270 53.3
BcaC03g17457 Brassica carinata HOM05D000113 ORTHO05D006161 6.5e-72 275.0 288 50.3
AL8G14950 Arabidopsis lyrata HOM05D000113 ORTHO05D006161 1.1e-71 274.2 265 52.1
CARHR032810 Cardamine hirsuta HOM05D000113 ORTHO05D006161 1.9e-71 273.5 265 53.2
C02p54060 Brassica napus HOM05D000113 ORTHO05D006161 4.2e-71 272.3 286 50.0
BolC2t11468H Brassica oleracea HOM05D000113 ORTHO05D006161 4.2e-71 272.3 286 50.0
BraA02t08535Z Brassica rapa HOM05D000113 ORTHO05D006161 4.2e-71 272.3 287 50.9
THA.LOC104802184 Tarenaya hassleriana HOM05D000113 ORTHO05D006161 5.5e-71 271.9 285 48.8
Sp7g11220 Schrenkiella parvula HOM05D000113 ORTHO05D006161 7.2e-71 271.6 272 50.7
Carub.0001s3158 Capsella rubella HOM05D000113 ORTHO05D006161 6.1e-70 268.5 265 52.1
A02p35320 Brassica napus HOM05D000113 ORTHO05D006161 2.3e-69 266.5 287 49.8
Thhalv10024243m.g Eutrema salsugineum HOM05D000113 ORTHO05D006161 2.3e-69 266.5 273 50.5
AT1G33390 Arabidopsis thaliana HOM05D000113 ORTHO05D006161 4.0e-69 265.8 265 51.3
BcaB07g30168 Brassica carinata HOM05D000113 ORTHO05D006161 6.8e-69 265.0 264 51.5
SEGI_22008 Sequoiadendron giganteum HOM05D000113 ORTHO05D006161 6.8e-69 265.0 279 51.6
SEGI_29750 Sequoiadendron giganteum HOM05D000113 ORTHO05D006161 1.5e-68 263.8 279 51.6
COL.COLO4_23301 Corchorus olitorius HOM05D000113 ORTHO05D006161 4.8e-67 258.8 199 63.3
EL10Ac4g10264 Beta vulgaris HOM05D000113 ORTHO05D006161 2.7e-65 253.1 269 53.2
EL10Ac4g10280 Beta vulgaris HOM05D000113 ORTHO05D006161 3.5e-65 252.7 268 52.2
EL10Ac4g07792 Beta vulgaris HOM05D000113 ORTHO05D006161 3.6e-62 242.7 270 50.0
Pp3c3_18630 Physcomitrium patens HOM05D000113 ORTHO05D006161 1.0e-61 241.1 270 46.3
Nitab4.5_0004367g0140 Nicotiana tabacum HOM05D000113 ORTHO05D006161 1.4e-61 240.7 262 49.2
RcHm_v2.0_Chr7g0220171 Rosa chinensis HOM05D000113 ORTHO05D006161 3.5e-57 226.1 264 47.0
Potri.002G201400 Populus trichocarpa HOM05D000113 ORTHO05D006161 7.8e-57 224.9 164 65.2
Mapoly0044s0018 Marchantia polymorpha HOM05D000113 ORTHO05D006161 1.9e-55 220.3 271 42.1
BcaC03g17455 Brassica carinata HOM05D000113 ORTHO05D006161 5.6e-55 218.8 239 48.5
Hma1.2p1_0098F.1_g048470 Hydrangea macrophylla HOM05D000113 ORTHO05D006161 8.9e-53 211.5 281 45.2
CBR_g66799 Chara braunii HOM05D000113 ORTHO05D006161 2.8e-46 189.9 268 39.9
Atru.chr9.1269 Acer truncatum HOM05D000113 ORTHO05D006161 2.0e-44 183.7 138 63.8
Migut.G00075 Erythranthe guttata HOM05D000113 ORTHO05D006161 4.6e-41 172.6 267 43.1
SMO367G1023 Selaginella moellendorffii HOM05D000113 ORTHO05D006161 2.1e-38 163.7 263 38.8
CDE07G0864 Ceratophyllum demersum HOM05D000113 ORTHO05D006161 8.3e-35 151.8 116 62.1
Cre07.g352251 Chlamydomonas reinhardtii HOM05D000113 ORTHO05D006161 9.2e-34 148.3 255 38.8
MCO05G299 Micromonas commoda HOM05D000113 ORTHO05D006161 3.9e-32 142.9 254 35.8
vmacro15135 Vaccinium macrocarpon HOM05D000113 ORTHO05D006161 6.6e-32 142.1 277 36.1
Potri.017G107900 Populus trichocarpa HOM05D000113 ORTHO05D006161 8.4e-27 125.2 109 54.1
TPR.G23919 Trifolium pratense HOM05D000113 ORTHO05D006161 8.4e-27 125.2 283 33.2
Lj3A171T9 Lonicera japonica HOM05D000113 ORTHO05D014811 3.2e-26 123.2 147 48.3
RcHm_v2.0_Chr4g0386401 Rosa chinensis HOM05D000113 ORTHO05D006161 7.8e-25 118.6 185 43.2
Hma1.2p1_0098F.1_g048420 Hydrangea macrophylla HOM05D000113 ORTHO05D006161 6.6e-24 115.5 95 65.3
PRCOL_00004828 Prasinoderma coloniale HOM05D000113 ORTHO05D006161 4.7e-22 109.4 209 34.9
DCAR_018927 Daucus carota HOM05D000310 ORTHO05D006161 3.1e-21 106.7 120 49.2
Rhsim09G0109600 Rhododendron simsii HOM05D000113 ORTHO05D006161 6.9e-21 105.5 113 54.9
Lj3C13G2 Lonicera japonica HOM05D000113 ORTHO05D030878 5.8e-20 102.4 86 60.5
CDE07G1855 Ceratophyllum demersum HOM05D000113 ORTHO05D006161 2.2e-19 100.5 111 49.5
ECA248G0443 Erigeron canadensis HOM05D000009 ORTHO05D000008 5.6e-15 85.9 73 53.4
AagrBONN_evm.TU.Sc2ySwM_344.808 Anthoceros agrestis HOM05D000482 ORTHO05D000349 7.3e-15 85.5 106 44.3
RcHm_v2.0_Chr2g0168431 Rosa chinensis HOM05D000113 ORTHO05D014811 8.1e-14 82.0 91 50.5
CAN.G535.3 Capsicum annuum HOM05D000113 ORTHO05D030878 2.4e-13 80.5 77 55.8
Medtr3g070440 Medicago truncatula HOM05D000113 ORTHO05D048871 1.1e-10 71.6 202 27.2
RcHm_v2.0_Chr2g0168421 Rosa chinensis HOM05D000113 ORTHO05D048871 4.6e-09 66.2 75 52.0
FAN05G0532 Fragaria x ananassa HOM05D016056 ORTHO05D014811 3.9e-08 63.2 94 37.2
Actinidia24814 Actinidia chinensis HOM05D000113 ORTHO05D030878 1.9e-07 60.8 93 38.7
CDE02G2176 Ceratophyllum demersum HOM05D000113 ORTHO05D003010 1.6e-06 57.8 102 31.4
Os05g0389800 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D002571 1.6e-06 57.8 68 36.8
SMO197G0016 Selaginella moellendorffii HOM05D000113 ORTHO05D003010 1.6e-06 57.8 87 40.2
DCAR_012678 Daucus carota HOM05D000113 ORTHO05D003010 2.8e-06 57.0 132 30.3
Medtr3g070430 Medicago truncatula HOM05D000113 ORTHO05D006161 2.8e-06 57.0 56 42.9
CSS0030678 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D002571 3.7e-06 56.6 65 38.5
Lj3C171T0 Lonicera japonica HOM05D000113 ORTHO05D014811 3.7e-06 56.6 59 54.2
MBI07_g29113_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D003010 4.8e-06 56.2 136 29.4
RcHm_v2.0_Chr5g0081521 Rosa chinensis HOM05D000113 ORTHO05D003010 4.8e-06 56.2 127 28.3
Rhsim03G0231700 Rhododendron simsii HOM05D000113 ORTHO05D003010 8.1e-06 55.5 109 32.1
vmacro06297 Vaccinium macrocarpon HOM05D000113 ORTHO05D003010 8.1e-06 55.5 109 32.1


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