Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00859 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 3.0e-69 265.0 128 100.0
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 6.3e-27 124.4 124 50.0
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 6.3e-27 124.4 125 51.2
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 1.2e-25 120.2 97 57.7
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 1.2e-25 120.2 125 48.8
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 1.5e-25 119.8 121 51.2
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 1.5e-25 119.8 124 47.6
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 2.6e-25 119.0 122 53.3
AUR62037113 Chenopodium quinoa HOM05D003682 ORTHO05D004224 7.7e-25 117.5 121 50.4
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 3.8e-24 115.2 125 48.8
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 5.0e-24 114.8 122 50.8
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 6.5e-24 114.4 121 47.9
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 7.2e-23 110.9 122 49.2
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 9.4e-23 110.5 104 51.0
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.6e-22 109.8 125 45.6
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 2.7e-22 109.0 126 48.4
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 4.7e-22 108.2 120 47.5
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 4.7e-22 108.2 125 44.8
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 6.1e-22 107.8 126 48.4
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 8.0e-22 107.5 126 48.4
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 8.0e-22 107.5 125 46.4
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 1.8e-21 106.3 124 46.0
SEGI_17476 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 2.3e-21 105.9 121 47.1
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 3.0e-21 105.5 126 46.0
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 3.0e-21 105.5 122 50.0
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 6.7e-21 104.4 121 46.3
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 8.8e-21 104.0 97 52.6
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 2.0e-20 102.8 99 50.5
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 2.6e-20 102.4 140 40.0
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 3.3e-20 102.1 98 51.0
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 4.4e-20 101.7 109 46.8
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 4.4e-20 101.7 97 51.5
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 5.7e-20 101.3 99 48.5
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 5.7e-20 101.3 99 49.5
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 7.4e-20 100.9 124 42.7
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 7.4e-20 100.9 93 50.5
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 9.7e-20 100.5 100 50.0
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 1.7e-19 99.8 125 45.6
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 2.2e-19 99.4 121 43.8
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 2.2e-19 99.4 122 40.2
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 2.8e-19 99.0 122 45.1
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 3.7e-19 98.6 126 40.5
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 3.7e-19 98.6 104 48.1
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 6.3e-19 97.8 99 45.5
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 6.3e-19 97.8 124 41.1
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 1.1e-18 97.1 106 50.9
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 1.4e-18 96.7 99 49.5
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 1.8e-18 96.3 122 41.8
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 2.4e-18 95.9 120 42.5
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 2.4e-18 95.9 141 38.3
GSVIVG01009191001 Vitis vinifera HOM05D003682 ORTHO05D004224 2.4e-18 95.9 97 46.4
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 3.1e-18 95.5 101 52.5
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 9.1e-18 94.0 97 48.5
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 9.1e-18 94.0 99 49.5
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 9.1e-18 94.0 97 45.4
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.2e-17 93.6 96 45.8
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.6e-17 93.2 96 46.9
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 1.6e-17 93.2 100 49.0
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 2.0e-17 92.8 96 45.8
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 2.0e-17 92.8 96 45.8
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 2.0e-17 92.8 95 46.3
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 2.0e-17 92.8 92 47.8
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 2.6e-17 92.4 125 43.2
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 2.6e-17 92.4 96 49.0
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 4.5e-17 91.7 103 52.4
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 7.7e-17 90.9 96 44.8
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 7.7e-17 90.9 125 39.2
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 1.0e-16 90.5 98 41.8
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 1.3e-16 90.1 103 51.5
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 1.3e-16 90.1 96 51.0
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 1.7e-16 89.7 129 41.9
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 2.2e-16 89.4 96 44.8
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 2.9e-16 89.0 103 43.7
SalBow4G1793 Salvia bowleyana HOM05D003682 ORTHO05D004224 5.0e-16 88.2 150 38.0
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 1.1e-15 87.0 99 43.4
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 1.1e-15 87.0 122 38.5
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 1.1e-15 87.0 94 46.8
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 1.5e-15 86.7 124 39.5
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 1.9e-15 86.3 97 47.4
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 1.9e-15 86.3 102 45.1
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 1.9e-15 86.3 96 50.0
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 3.2e-15 85.5 109 40.4
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 3.2e-15 85.5 126 40.5
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 3.2e-15 85.5 118 44.9
CSS0003380 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 7.2e-15 84.3 112 43.8
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 7.2e-15 84.3 95 48.4
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 7.2e-15 84.3 122 37.7
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 7.2e-15 84.3 99 42.4
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 9.4e-15 84.0 100 47.0
CSS0014234 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.6e-14 83.2 110 41.8
CSS0026243 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.6e-14 83.2 110 42.7
CSS0040590 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.6e-14 83.2 110 42.7
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 1.6e-14 83.2 102 42.2
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 2.7e-14 82.4 94 48.9
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 3.6e-14 82.0 100 46.0
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 8.0e-14 80.9 95 45.3
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 8.0e-14 80.9 98 41.8
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.0e-13 80.5 94 43.6
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 1.4e-13 80.1 83 45.8
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 4.0e-13 78.6 138 35.5
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 5.2e-13 78.2 126 36.5
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 6.8e-13 77.8 105 42.9
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 6.8e-13 77.8 99 43.4
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 8.8e-13 77.4 99 41.4
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 8.8e-13 77.4 99 41.4
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 1.2e-12 77.0 121 37.2
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 1.5e-12 76.6 97 41.2
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 1.5e-12 76.6 97 41.2
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.6e-12 75.9 125 40.0
CSS0042448 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.6e-12 75.9 110 40.0
CSS0006921 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.4e-12 75.5 110 39.1
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 7.5e-12 74.3 97 40.2
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 9.8e-12 73.9 125 38.4
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 9.8e-12 73.9 98 41.8
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 1.3e-11 73.6 96 38.5
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 3.7e-11 72.0 97 38.1
CSS0000677 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 6.3e-11 71.2 110 40.0
SHI09562 Sapria himalayana HOM05D003682 ORTHO05D000023 6.3e-11 71.2 141 34.0
Lalb_Chr04g0252781 Lupinus albus HOM05D003682 ORTHO05D004224 1.4e-10 70.1 58 62.1
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 1.8e-10 69.7 82 45.1
CSS0029231 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 7.0e-10 67.8 110 39.1
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 9.1e-10 67.4 124 37.1
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 9.1e-10 67.4 141 33.3
Prupe.1G572700 Prunus persica HOM05D003682 ORTHO05D004224 1.6e-09 66.6 46 60.9
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 2.7e-09 65.9 99 39.4
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 2.9e-08 62.4 75 41.3


User provided reference genes

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