Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 2.3e-139 498.8 243 100.0
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 7.3e-117 424.1 243 80.2
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 1.2e-114 416.8 243 79.8
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 2.6e-114 415.6 243 78.6
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 1.3e-113 413.3 243 79.4
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 1.7e-110 402.9 243 77.4
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 1.7e-110 402.9 230 80.9
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 3.0e-110 402.1 241 76.3
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 3.3e-109 398.7 243 75.3
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 7.3e-109 397.5 243 76.5
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 7.3e-109 397.5 243 77.0
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 7.3e-109 397.5 244 76.2
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 9.5e-109 397.1 242 76.0
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 9.5e-109 397.1 244 75.4
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 1.2e-108 396.7 242 76.0
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 1.6e-108 396.4 243 73.7
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 1.6e-108 396.4 243 76.5
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 3.6e-108 395.2 243 75.7
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 6.2e-108 394.4 244 76.2
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 8.1e-108 394.0 242 75.6
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 8.1e-108 394.0 241 74.7
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 8.1e-108 394.0 244 75.0
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 1.4e-107 393.3 243 75.3
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 1.4e-107 393.3 244 75.4
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 2.4e-107 392.5 245 75.9
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 2.4e-107 392.5 243 76.1
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 3.1e-107 392.1 243 74.5
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 4.0e-107 391.7 243 74.9
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 5.2e-107 391.3 242 74.8
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 5.2e-107 391.3 244 75.4
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 5.2e-107 391.3 244 75.4
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 5.2e-107 391.3 244 74.6
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 8.9e-107 390.6 243 76.1
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 8.9e-107 390.6 244 75.4
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 8.9e-107 390.6 243 75.7
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 8.9e-107 390.6 244 74.6
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 8.9e-107 390.6 244 74.2
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 1.5e-106 389.8 244 74.2
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 2.0e-106 389.4 242 76.0
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 7.6e-106 387.5 244 74.2
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 9.9e-106 387.1 243 74.1
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 2.2e-105 386.0 243 73.3
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 2.9e-105 385.6 243 72.0
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 2.9e-105 385.6 243 72.0
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 3.2e-104 382.1 242 73.1
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.2e-104 381.7 243 73.7
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 7.1e-104 380.9 258 70.5
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 7.1e-104 380.9 274 66.4
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 9.2e-104 380.6 241 71.4
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 1.6e-103 379.8 243 73.7
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 7.8e-103 377.5 243 70.8
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 1.0e-102 377.1 242 71.9
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 1.0e-102 377.1 284 63.7
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 1.3e-102 376.7 295 62.4
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 2.3e-102 375.9 241 71.8
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 3.0e-102 375.6 244 72.5
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 5.1e-102 374.8 275 66.5
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 6.6e-102 374.4 241 72.2
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 6.6e-102 374.4 228 75.9
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 1.5e-101 373.2 244 71.7
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 1.9e-101 372.9 241 71.8
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 1.9e-101 372.9 241 71.4
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 2.5e-101 372.5 242 71.1
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 3.3e-101 372.1 241 72.2
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 1.2e-100 370.2 241 70.5
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 1.2e-100 370.2 244 71.3
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 1.2e-100 370.2 243 70.0
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 2.1e-100 369.4 242 71.1
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.1e-100 369.4 244 70.9
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 4.7e-100 368.2 241 71.4
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 4.7e-100 368.2 208 80.3
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 8.1e-100 367.5 242 70.2
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 2.4e-99 365.9 242 70.2
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 2.4e-99 365.9 244 68.9
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 4.0e-99 365.2 241 70.1
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 5.3e-99 364.8 244 70.5
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 6.9e-99 364.4 242 69.8
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 1.2e-98 363.6 230 74.3
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 1.2e-98 363.6 244 68.4
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 1.5e-98 363.2 244 71.7
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 2.6e-98 362.5 244 71.3
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 3.4e-98 362.1 244 70.1
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 5.8e-98 361.3 243 67.5
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 9.9e-98 360.5 229 73.8
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 4.9e-97 358.2 243 67.1
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 8.4e-97 357.5 244 68.9
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 2.1e-95 352.8 327 55.7
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 3.5e-95 352.1 253 65.6
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 3.9e-94 348.6 214 75.7
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 1.6e-92 343.2 244 67.2
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 1.6e-92 343.2 243 66.7
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 2.1e-92 342.8 240 67.5
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 3.9e-86 322.0 279 54.1
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 5.1e-86 321.6 252 58.3
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 6.7e-86 321.2 205 74.1
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 1.1e-83 313.9 205 72.2
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.4e-83 313.5 204 71.1
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 2.0e-82 309.7 250 55.6
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.9e-81 305.8 243 62.1
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.9e-80 303.1 300 54.3
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 5.6e-77 291.6 243 58.8
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 6.2e-76 288.1 213 65.7
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 4.3e-69 265.4 312 44.6
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 4.6e-63 245.4 247 50.6
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 1.5e-61 240.4 259 46.7
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 5.5e-56 221.9 339 42.2
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 1.6e-55 220.3 236 46.6
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 4.7e-55 218.8 253 43.1
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 7.4e-53 211.5 249 45.4
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.3e-49 200.7 146 69.2
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 1.1e-48 197.6 110 77.3
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 8.0e-47 191.4 125 74.4
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 2.1e-39 166.8 120 65.8
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.2e-36 156.8 83 75.9
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 4.0e-30 136.0 96 65.6
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 2.3e-22 110.2 72 68.1
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 2.2e-20 103.6 61 75.4
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.9e-20 102.4 83 61.4
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.9e-20 102.4 83 61.4
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.3e-16 89.4 74 60.8
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 6.8e-14 82.0 114 43.9
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 5.8e-13 79.0 69 53.6
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 1.1e-11 74.7 49 67.3
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 5.4e-11 72.4 49 65.3
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 5.4e-11 72.4 49 65.3
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 2.7e-10 70.1 74 41.9
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 6.6e-09 65.5 43 67.4
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 8.6e-09 65.1 37 75.7
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 5.6e-08 62.4 75 42.7
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 5.6e-08 62.4 77 42.9
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 1.2e-07 61.2 76 44.7
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 1.6e-07 60.8 75 41.3
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 2.8e-07 60.1 74 44.6
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 4.7e-07 59.3 72 40.3
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 6.2e-07 58.9 68 41.2
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 1.1e-06 58.2 74 40.5
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 1.8e-06 57.4 80 33.8
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 2.3e-06 57.0 38 65.8
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 2.3e-06 57.0 77 41.6
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 3.1e-06 56.6 76 42.1
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 4.0e-06 56.2 75 41.3
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 4.0e-06 56.2 75 40.0
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 4.0e-06 56.2 76 42.1
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 4.0e-06 56.2 74 43.2
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 4.0e-06 56.2 80 38.8
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 5.2e-06 55.8 76 39.5
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 5.2e-06 55.8 75 42.7
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 6.8e-06 55.5 74 39.2
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 6.8e-06 55.5 74 40.5
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 6.8e-06 55.5 76 39.5
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 6.8e-06 55.5 81 35.8
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 8.9e-06 55.1 74 41.9


User provided reference genes

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