Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00002 Aquilegia oxysepala HOM05D004147 ORTHO05D005606 7.1e-152 540.8 321 100.0
Dinv06248 Davidia involucrata HOM05D004147 ORTHO05D005606 2.1e-135 486.1 289 84.4
Dinv15522 Davidia involucrata HOM05D004147 ORTHO05D005606 2.1e-135 486.1 289 84.4
Nn2g15911 Nelumbo nucifera HOM05D004147 ORTHO05D005606 1.7e-134 483.0 289 84.4
Thecc.09G206400 Theobroma cacao HOM05D004147 ORTHO05D005606 1.1e-133 480.3 289 83.4
COL.COLO4_35060 Corchorus olitorius HOM05D004147 ORTHO05D005606 1.5e-133 479.9 289 83.4
TAR633G2501 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.5e-133 479.9 289 83.4
Glyma.07G225200 Glycine max HOM05D004147 ORTHO05D005606 1.9e-133 479.6 289 83.4
VMungo0251G0902 Vigna mungo HOM05D004147 ORTHO05D005606 2.5e-133 479.2 289 83.7
Phvul.002G101600 Phaseolus vulgaris HOM05D004147 ORTHO05D005606 5.6e-133 478.0 289 83.4
QL01p007763 Quercus lobata HOM05D004147 ORTHO05D005606 1.3e-132 476.9 288 82.6
Atru.chr3.2044 Acer truncatum HOM05D004147 ORTHO05D005606 1.6e-132 476.5 289 82.7
CANSAT35G0441 Cannabis sativa HOM05D004147 ORTHO05D005606 2.8e-132 475.7 289 82.7
Glyma.20G025100 Glycine max HOM05D004147 ORTHO05D005606 2.8e-132 475.7 289 82.7
CSS0011494 Camellia sinensis var. sinensis HOM05D004147 ORTHO05D005606 8.1e-132 474.2 289 82.4
TPR.G34051 Trifolium pratense HOM05D004147 ORTHO05D005606 8.1e-132 474.2 289 82.4
MD03G1000100 Malus domestica HOM05D004147 ORTHO05D005606 1.1e-131 473.8 289 82.0
Cpa.g.sc119.7 Carica papaya HOM05D004147 ORTHO05D005606 1.4e-131 473.4 289 82.4
Ca_18795_v3 Cicer arietinum L. HOM05D004147 ORTHO05D005606 1.4e-131 473.4 289 82.4
Oeu023957.1 Olea europaea HOM05D004147 ORTHO05D005606 1.8e-131 473.0 289 81.7
Prupe.6G000600 Prunus persica HOM05D004147 ORTHO05D005606 1.8e-131 473.0 290 82.8
MBI19_g24069_MAGBIO Magnolia biondii HOM05D004147 ORTHO05D005606 3.1e-131 472.2 284 83.1
Duzib150G1508 Durio zibethinus HOM05D004147 ORTHO05D005606 4.0e-131 471.9 289 82.7
Potri.003G224000 Populus trichocarpa HOM05D004147 ORTHO05D005606 9.0e-131 470.7 289 81.7
Ciclev10016090m.g Citrus clementina HOM05D004147 ORTHO05D005606 1.5e-130 469.9 289 81.7
Gohir.A05G000500 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.5e-130 469.9 289 82.4
Potri.001G000700 Populus trichocarpa HOM05D004147 ORTHO05D005606 1.5e-130 469.9 290 81.4
CiPaw.13G180000 Carya illinoinensis HOM05D004147 ORTHO05D005606 2.0e-130 469.5 289 82.0
Lj4g0017588 Lotus japonicus HOM05D004147 ORTHO05D005606 2.0e-130 469.5 290 82.4
MD11G1000500 Malus domestica HOM05D004147 ORTHO05D005606 2.0e-130 469.5 289 82.0
PGR102G2115 Punica granatum HOM05D004147 ORTHO05D005606 2.0e-130 469.5 289 79.6
Gohir.D05G000800 Gossypium hirsutum HOM05D004147 ORTHO05D005606 2.6e-130 469.2 289 82.4
Dinv09765 Davidia involucrata HOM05D004147 ORTHO05D005606 3.4e-130 468.8 289 82.0
FvH4_3g46070 Fragaria vesca HOM05D004147 ORTHO05D005606 3.4e-130 468.8 290 81.7
TAR623G0988 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.7e-129 466.5 289 82.0
Gohir.A03G021600 Gossypium hirsutum HOM05D004147 ORTHO05D005606 3.8e-129 465.3 290 81.7
Medtr4g083230 Medicago truncatula HOM05D004147 ORTHO05D005606 4.9e-129 464.9 289 81.7
Gohir.D03G147100 Gossypium hirsutum HOM05D004147 ORTHO05D005606 6.4e-129 464.5 289 81.3
CsaV3_1G041490 Cucumis sativus L. HOM05D004147 ORTHO05D005606 1.9e-128 463.0 289 80.3
MELO3C015560.2 Cucumis melo HOM05D004147 ORTHO05D005606 4.2e-128 461.8 289 79.9
Gorai.003G154600 Gossypium raimondii HOM05D004147 ORTHO05D005606 4.2e-128 461.8 290 81.0
Lalb_Chr16g0385471 Lupinus albus HOM05D004147 ORTHO05D005606 1.2e-127 460.3 289 81.7
Lalb_Chr09g0328961 Lupinus albus HOM05D004147 ORTHO05D005606 2.7e-127 459.1 289 81.7
PSO675G6472 Papaver somniferum HOM05D004147 ORTHO05D005606 3.5e-127 458.8 290 81.0
Migut.N00528 Erythranthe guttata HOM05D004147 ORTHO05D005606 4.6e-127 458.4 289 79.2
PSO541G5718 Papaver somniferum HOM05D004147 ORTHO05D005606 4.6e-127 458.4 290 81.0
Duzib170G0806 Durio zibethinus HOM05D004147 ORTHO05D005606 6.0e-127 458.0 288 80.9
arahy.Tifrunner.gnm1.ann1.41N8FB Arachis hypogaea HOM05D004147 ORTHO05D005606 5.1e-126 454.9 289 79.2
arahy.Tifrunner.gnm1.ann1.JJ8YPF Arachis hypogaea HOM05D004147 ORTHO05D005606 5.1e-126 454.9 289 79.2
MSTRG.5958 Avicennia marina HOM05D004147 ORTHO05D005606 5.1e-126 454.9 288 78.1
MSTRG.19397 Avicennia marina HOM05D004147 ORTHO05D005606 8.7e-126 454.1 289 79.9
Sc09g0002150 Simmondsia chinensis HOM05D004147 ORTHO05D005606 1.9e-125 453.0 290 79.0
FAN11G3393 Fragaria x ananassa HOM05D004147 ORTHO05D005606 2.5e-125 452.6 316 74.7
PSO339G2679 Papaver somniferum HOM05D004147 ORTHO05D005606 3.3e-125 452.2 287 79.1
PSO384G4999 Papaver somniferum HOM05D004147 ORTHO05D005606 3.3e-125 452.2 287 79.1
Rhsim13G0235300 Rhododendron simsii HOM05D004147 ORTHO05D005606 4.3e-125 451.8 325 72.3
Sopen01g025520 Solanum pennellii HOM05D004147 ORTHO05D005606 4.3e-125 451.8 289 78.9
RcHm_v2.0_Chr5g0084131 Rosa chinensis HOM05D004147 ORTHO05D005606 9.6e-125 450.7 289 78.5
Hund19733 Selenicereus undatus HOM05D004147 ORTHO05D005606 1.6e-124 449.9 290 77.9
FAN16G1044 Fragaria x ananassa HOM05D004147 ORTHO05D005606 2.8e-124 449.1 321 73.2
AUR62040894 Chenopodium quinoa HOM05D004147 ORTHO05D005606 1.4e-123 446.8 290 77.6
Cc01_g00350 Coffea canephora HOM05D004147 ORTHO05D005606 1.4e-123 446.8 289 79.2
CAN.G1941.2 Capsicum annuum HOM05D004147 ORTHO05D005606 4.0e-123 445.3 289 78.5
ClCG03G014680 Citrullus lanatus HOM05D004147 ORTHO05D005606 5.3e-123 444.9 289 77.5
DCAR_001959 Daucus carota HOM05D004147 ORTHO05D005606 5.3e-123 444.9 289 77.5
Sp4g14490 Schrenkiella parvula HOM05D004147 ORTHO05D005606 5.3e-123 444.9 289 78.2
ATR0068G003 Amborella trichopoda HOM05D004147 ORTHO05D005606 9.0e-123 444.1 289 76.1
Hma1.2p1_0589F.1_g184660 Hydrangea macrophylla HOM05D004147 ORTHO05D005606 1.5e-122 443.4 308 75.0
TWI34G0273 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 1.5e-122 443.4 289 77.9
Thhalv10017021m.g Eutrema salsugineum HOM05D004147 ORTHO05D005606 4.5e-122 441.8 289 78.2
HPP92_018009 Vanilla planifolia HOM05D004147 ORTHO05D005606 4.5e-122 441.8 291 76.6
TWI60G0666 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 7.6e-122 441.0 289 77.2
Eucgr.J01722 Eucalyptus grandis HOM05D004147 ORTHO05D005606 1.3e-121 440.3 291 77.7
FAN21G1018 Fragaria x ananassa HOM05D004147 ORTHO05D005606 1.7e-121 439.9 295 76.9
TWI32G0854 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 1.7e-121 439.9 289 78.2
C04p17540 Brassica napus HOM05D004147 ORTHO05D005606 4.9e-121 438.3 290 76.6
BolC4t23301H Brassica oleracea HOM05D004147 ORTHO05D005606 4.9e-121 438.3 290 76.6
CARHR125880 Cardamine hirsuta HOM05D004147 ORTHO05D005606 6.4e-121 438.0 289 76.5
Sed0000702 Sechium edule HOM05D004147 ORTHO05D005606 6.4e-121 438.0 289 75.1
BraA05t20280Z Brassica rapa HOM05D004147 ORTHO05D005606 8.4e-121 437.6 290 76.2
Carub.0004s1343 Capsella rubella HOM05D004147 ORTHO05D005606 3.2e-120 435.6 289 76.1
Haze_22914 Corylus avellana HOM05D004147 ORTHO05D005606 4.2e-120 435.3 313 73.2
A05p13420 Brassica napus HOM05D004147 ORTHO05D005606 3.5e-119 432.2 290 75.9
Peaxi162Scf01181g00019 Petunia axillaris HOM05D004147 ORTHO05D005606 1.3e-118 430.3 324 71.0
SGA_v2.0_scaffold3G01703 Striga asiatica HOM05D004147 ORTHO05D005606 1.8e-118 429.9 289 76.1
EL10Ac4g10393 Beta vulgaris HOM05D004147 ORTHO05D005606 2.3e-118 429.5 291 75.3
Aa31LG5G4940 Aethionema arabicum HOM05D004147 ORTHO05D005606 3.0e-118 429.1 313 71.6
GSVIVG01025513001 Vitis vinifera HOM05D004147 ORTHO05D005606 1.5e-117 426.8 289 76.8
Zm00001eb127970 Zea mays HOM05D004147 ORTHO05D005606 1.9e-117 426.4 293 73.7
Os01g0260700 Oryza sativa ssp. japonica HOM05D004147 ORTHO05D005606 2.5e-117 426.0 293 74.1
Zm00001eb333400 Zea mays HOM05D004147 ORTHO05D005606 2.5e-117 426.0 293 73.7
AT2G32080 Arabidopsis thaliana HOM05D004147 ORTHO05D005606 5.6e-117 424.9 289 75.1
vmacro04279 Vaccinium macrocarpon HOM05D004147 ORTHO05D005606 5.6e-117 424.9 312 71.5
Sabra01G0000600 Salix brachista HOM05D004147 ORTHO05D005606 1.6e-116 423.3 327 69.1
SGA_v2.0_scaffold6G03333 Striga asiatica HOM05D000201 ORTHO05D005606 1.6e-116 423.3 326 69.0
ECA238G2098 Erigeron canadensis HOM05D004147 ORTHO05D005606 2.8e-116 422.5 298 74.8
HanXRQChr14g0437101 Helianthus annuus HOM05D004147 ORTHO05D005606 1.4e-115 420.2 298 75.2
Ah.04g161370 Amaranthus hybridus HOM05D004147 ORTHO05D005606 3.1e-115 419.1 298 74.2
Sc16g0009630 Simmondsia chinensis HOM05D004147 ORTHO05D005606 3.1e-115 419.1 290 73.4
AUR62042623 Chenopodium quinoa HOM05D004147 ORTHO05D005606 3.4e-114 415.6 326 66.9
AL103U10050 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 4.5e-114 415.2 289 74.7
AL4G27460 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 4.5e-114 415.2 289 74.7
CDE09G0171 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 7.6e-114 414.5 280 72.5
Actinidia16222 Actinidia chinensis HOM05D000201 ORTHO05D001601 1.3e-113 413.7 260 79.6
CDE04G0726 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.2e-111 407.1 289 71.6
SalBow3G0983 Salvia bowleyana HOM05D004147 ORTHO05D005606 3.5e-111 405.6 296 73.3
Psat7g134480 Pisum sativum HOM05D004147 ORTHO05D005606 1.9e-104 383.3 239 82.0
Manes.15G111500 Manihot esculenta HOM05D004147 ORTHO05D005606 4.2e-104 382.1 249 78.3
CDE02G2463 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 7.9e-103 377.9 281 68.3
Sed0015400 Sechium edule HOM05D004147 ORTHO05D005606 1.3e-100 370.5 240 77.9
TAR623G0822 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.5e-98 363.6 205 88.3
CAN.G281.7 Capsicum annuum HOM05D004147 ORTHO05D005606 2.9e-97 359.4 289 66.8
Lsat_1_v5_gn_2_50601 Lactuca sativa HOM05D004147 ORTHO05D005606 1.4e-96 357.1 291 66.0
Nitab4.5_0000075g0060 Nicotiana tabacum HOM05D004147 ORTHO05D005606 1.9e-96 356.7 289 66.1
Nitab4.5_0000890g0080 Nicotiana tabacum HOM05D004147 ORTHO05D005606 1.9e-96 356.7 289 66.1
unitig_62.g23531 Utricularia gibba HOM05D004147 ORTHO05D005606 3.7e-92 342.4 272 65.8
CDE08G0894 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 3.6e-87 325.9 255 65.5
Pp3c14_13490 Physcomitrium patens HOM05D004147 ORTHO05D005606 8.8e-86 321.2 295 57.6
Pp3c17_4780 Physcomitrium patens HOM05D004147 ORTHO05D005606 1.5e-85 320.5 302 58.6
AagrBONN_evm.TU.Sc2ySwM_368.1732 Anthoceros agrestis HOM05D004147 ORTHO05D005606 4.4e-85 318.9 297 57.9
Actinidia00922 Actinidia chinensis HOM05D004147 ORTHO05D005606 1.4e-83 313.9 190 81.1
BcaB02g10449 Brassica carinata HOM05D004147 ORTHO05D005606 3.1e-83 312.8 228 71.9
CDE02G0470 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 3.1e-83 312.8 263 63.9
Sabra03G0166400 Salix brachista HOM05D004147 ORTHO05D005606 3.1e-83 312.8 181 86.2
CBR_g3650 Chara braunii HOM05D004147 ORTHO05D005606 1.2e-82 310.8 312 56.7
CDE08G0994 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.0e-82 310.1 202 74.3
SEGI_18063 Sequoiadendron giganteum HOM05D004147 ORTHO05D005606 2.0e-82 310.1 283 61.5
Nn7g35773 Nelumbo nucifera HOM05D004147 ORTHO05D005606 2.2e-81 306.6 202 78.2
Solyc01g049680.3 Solanum lycopersicum HOM05D004147 ORTHO05D005606 3.4e-77 292.7 181 80.1
SMO164G0008 Selaginella moellendorffii HOM05D004147 ORTHO05D005606 6.8e-70 268.5 281 53.0
Lj1A564T30 Lonicera japonica HOM05D004147 ORTHO05D005606 5.7e-69 265.4 246 62.2
unitig_52.g17528 Utricularia gibba HOM05D004147 ORTHO05D005606 1.0e-65 254.6 190 68.4
Gorai.009G000700 Gossypium raimondii HOM05D004147 ORTHO05D005606 3.8e-65 252.7 147 85.0
Sabra01G0000400 Salix brachista HOM05D004147 ORTHO05D005606 2.1e-47 193.7 116 82.8
HPP92_026678 Vanilla planifolia HOM05D004147 ORTHO05D005606 1.6e-42 177.6 120 75.8
Solyc01g049690.4 Solanum lycopersicum HOM05D004147 ORTHO05D005606 6.2e-39 165.6 112 75.0
Gorai.009G000600 Gossypium raimondii HOM05D004147 ORTHO05D005606 2.3e-38 163.7 112 74.1
MBI05_g14947_MAGBIO Magnolia biondii HOM05D000130 ORTHO05D002599 2.3e-38 163.7 100 80.0
Potri.013G061100 Populus trichocarpa HOM05D004147 ORTHO05D005606 4.9e-36 156.0 272 37.1
CAN.G678.10 Capsicum annuum HOM05D004147 ORTHO05D005606 6.6e-33 145.6 120 65.0
Lj1A564T31 Lonicera japonica HOM05D004147 ORTHO05D005606 6.6e-33 145.6 137 59.1
CAN.G640.3 Capsicum annuum HOM05D004147 ORTHO05D005606 8.6e-33 145.2 111 66.7
PRCOL_00001079 Prasinoderma coloniale HOM05D004147 ORTHO05D005606 2.5e-32 143.7 275 33.5
FAN25G3109 Fragaria x ananassa HOM05D004147 ORTHO05D005606 3.8e-28 129.8 94 71.3
C08p28370 Brassica napus HOM05D004147 ORTHO05D021856 1.9e-27 127.5 118 61.0
BolC8t50447H Brassica oleracea HOM05D004147 ORTHO05D021856 1.9e-27 127.5 118 61.0
BolC2t11193H Brassica oleracea HOM05D004147 ORTHO05D005606 4.2e-27 126.3 118 61.9
BcaC03g17178 Brassica carinata HOM05D004147 ORTHO05D021856 7.1e-27 125.6 105 66.7
unitig_52.g17527 Utricularia gibba HOM05D004147 ORTHO05D005606 7.1e-27 125.6 94 69.1
Oeu023697.1 Olea europaea HOM05D004147 ORTHO05D005606 9.3e-27 125.2 66 87.9
A03p64870 Brassica napus HOM05D004147 ORTHO05D005606 2.7e-26 123.6 118 59.3
BraA03t15549Z Brassica rapa HOM05D004147 ORTHO05D018802 2.7e-26 123.6 118 59.3
BolC5t32093H Brassica oleracea HOM05D004147 ORTHO05D021856 3.5e-26 123.2 118 60.2
TWI32G1322 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 4.6e-26 122.9 273 31.9
Lsat_1_v5_gn_4_94280 Lactuca sativa HOM05D004147 ORTHO05D005606 6.0e-26 122.5 233 37.8
Sabra01G0000300 Salix brachista HOM05D004147 ORTHO05D005606 2.3e-25 120.6 97 63.9
C05p33620 Brassica napus HOM05D004147 ORTHO05D021856 3.9e-25 119.8 118 59.3
C02p30750 Brassica napus HOM05D004147 ORTHO05D021856 5.1e-25 119.4 118 59.3
Cre06.g278208 Chlamydomonas reinhardtii HOM05D004147 ORTHO05D005606 3.6e-23 113.2 268 29.5
BcaC07g39671 Brassica carinata HOM05D004147 ORTHO05D005606 7.6e-21 105.5 86 64.0
BraA05t19995Z Brassica rapa HOM05D004147 ORTHO05D018802 1.3e-20 104.8 154 40.3
BcaC07g38232 Brassica carinata HOM05D004147 ORTHO05D005606 1.9e-19 100.9 148 41.9
BraA09t36212Z Brassica rapa HOM05D004147 ORTHO05D018802 1.2e-18 98.2 83 62.7
TAR623G1050 Trochodendron aralioides HOM05D004147 ORTHO05D005606 4.8e-15 86.3 44 95.5
HanXRQChr10g0307541 Helianthus annuus HOM05D004147 ORTHO05D005606 8.4e-12 75.5 41 80.5
Lsat_1_v5_gn_8_97821 Lactuca sativa HOM05D004147 ORTHO05D005606 1.4e-11 74.7 42 83.3


User provided reference genes

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