Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy295s001 Aquilegia oxysepala HOM05D004601 ORTHO05D038506 3.1e-56 221.9 136 100.0
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 1.2e-55 219.9 135 100.0
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 8.8e-19 97.4 135 45.9
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 1.1e-16 90.5 133 43.6
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 1.0e-14 84.0 134 44.0
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 1.3e-14 83.6 132 40.2
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 1.7e-14 83.2 133 42.9
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 3.2e-13 79.0 131 41.2
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 1.6e-12 76.6 133 36.8
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 6.1e-12 74.7 126 38.9
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 6.1e-12 74.7 125 39.2
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 1.8e-11 73.2 92 48.9
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 3.9e-11 72.0 89 49.4
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 6.7e-11 71.2 97 54.6
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 1.1e-10 70.5 91 46.2
FvH4_4g07160 Fragaria vesca HOM05D004601 ORTHO05D005806 2.0e-10 69.7 97 53.6
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 3.3e-10 68.9 129 36.4
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 4.4e-10 68.6 91 64.8
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 4.4e-10 68.6 94 42.6
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 5.7e-10 68.2 95 43.2
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 7.4e-10 67.8 91 46.2
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 7.4e-10 67.8 98 45.9
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 2.8e-09 65.9 92 42.4
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 3.7e-09 65.5 92 42.4
BcaC04g19998 Brassica carinata HOM05D004601 ORTHO05D005806 6.3e-09 64.7 96 38.5
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 6.3e-09 64.7 95 37.9
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 8.2e-09 64.3 91 42.9
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 8.2e-09 64.3 91 42.9
ClCG11G011720 Citrullus lanatus HOM05D004601 ORTHO05D005806 2.4e-08 62.8 91 42.9
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 2.4e-08 62.8 132 31.8
Eucgr.C00108 Eucalyptus grandis HOM05D004601 ORTHO05D005806 3.1e-08 62.4 123 44.7
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 4.1e-08 62.0 91 45.1
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 5.3e-08 61.6 95 40.0
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 5.3e-08 61.6 95 40.0
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 7.0e-08 61.2 96 41.7
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 7.0e-08 61.2 93 43.0
Solyc07g018000.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 7.0e-08 61.2 112 38.4
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 7.0e-08 61.2 112 39.3
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 7.0e-08 61.2 104 37.5
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 7.0e-08 61.2 92 42.4
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 9.1e-08 60.8 108 38.9
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 1.2e-07 60.5 137 32.8
Os04g0606450 Oryza sativa ssp. japonica HOM05D004601 ORTHO05D038506 1.2e-07 60.5 113 48.7
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 1.5e-07 60.1 129 32.6
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 2.0e-07 59.7 138 32.6
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 2.6e-07 59.3 126 31.0
Carub.0008s1767 Capsella rubella HOM05D004601 ORTHO05D005806 2.6e-07 59.3 94 40.4
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 3.4e-07 58.9 129 49.6
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 3.4e-07 58.9 104 39.4
MELO3C003972.2 Cucumis melo HOM05D004601 ORTHO05D005806 4.5e-07 58.5 95 42.1
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 4.5e-07 58.5 90 43.3
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 7.7e-07 57.8 126 31.0
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 7.7e-07 57.8 126 31.0
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 7.7e-07 57.8 139 32.4
ECA236G2032 Erigeron canadensis HOM05D004601 ORTHO05D005806 7.7e-07 57.8 90 43.3
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 7.7e-07 57.8 90 44.4
Psat1g144400 Pisum sativum HOM05D004601 ORTHO05D005806 1.0e-06 57.4 137 32.8
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 1.3e-06 57.0 90 41.1
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 1.3e-06 57.0 118 35.6
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 1.3e-06 57.0 114 39.5
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 1.7e-06 56.6 92 41.3
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 1.7e-06 56.6 79 45.6
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 2.2e-06 56.2 91 41.8
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 3.8e-06 55.5 100 38.0
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 5.0e-06 55.1 100 38.0
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 6.5e-06 54.7 114 31.6


User provided reference genes

Program Settings