Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G02492 Aquilegia oxysepala HOM05D006964 ORTHO05D008861 5.1e-41 170.6 86 100.0
SEGI_30607 Sequoiadendron giganteum HOM05D006964 ORTHO05D008861 2.3e-09 65.5 75 56.0
Actinidia35156 Actinidia chinensis HOM05D006964 ORTHO05D008861 3.0e-09 65.1 91 47.3
Mapoly0100s0005 Marchantia polymorpha HOM05D006964 ORTHO05D008861 3.0e-09 65.1 75 53.3
DCAR_005902 Daucus carota HOM05D006964 ORTHO05D008861 4.0e-09 64.7 75 54.7
Pp3c23_21270 Physcomitrium patens HOM05D006964 ORTHO05D008861 6.8e-09 63.9 75 49.3
MBI18_g18636_MAGBIO Magnolia biondii HOM05D006964 ORTHO05D008861 8.9e-09 63.5 75 52.0
EL10Ac6g15329 Beta vulgaris HOM05D006964 ORTHO05D008861 1.2e-08 63.2 95 44.2
CDE02G0076 Ceratophyllum demersum HOM05D006964 ORTHO05D008861 1.2e-08 63.2 75 54.7
Dinv35124 Davidia involucrata HOM05D006964 ORTHO05D008861 1.2e-08 63.2 75 52.0
Lj1A623T74 Lonicera japonica HOM05D006964 ORTHO05D008861 1.2e-08 63.2 75 50.7
Pp3c24_11680 Physcomitrium patens HOM05D006964 ORTHO05D008861 1.2e-08 63.2 75 50.7
Nn7g38387 Nelumbo nucifera HOM05D006964 ORTHO05D008861 1.5e-08 62.8 75 52.0
Sc07g0001890 Simmondsia chinensis HOM05D006964 ORTHO05D008861 1.5e-08 62.8 95 44.2
Lsat_1_v5_gn_1_40040 Lactuca sativa HOM05D006964 ORTHO05D008861 2.6e-08 62.0 75 49.3
SMO116G0181 Selaginella moellendorffii HOM05D006964 ORTHO05D008861 2.6e-08 62.0 75 53.3
TAR464G0001 Trochodendron aralioides HOM05D006964 ORTHO05D008861 2.6e-08 62.0 91 46.2
ATR0763G192 Amborella trichopoda HOM05D006964 ORTHO05D008861 3.4e-08 61.6 75 50.7
Cfa016256 Carpinus fangiana HOM05D006964 ORTHO05D008861 3.4e-08 61.6 91 46.2
Haze_00006 Corylus avellana HOM05D006964 ORTHO05D008861 3.4e-08 61.6 91 46.2
Aa31LG7G9960 Aethionema arabicum HOM05D006964 ORTHO05D008861 4.4e-08 61.2 75 53.3
Ah.02g121270 Amaranthus hybridus HOM05D006964 ORTHO05D008861 4.4e-08 61.2 95 44.2
Lj1C622G7 Lonicera japonica HOM05D006964 ORTHO05D008861 4.4e-08 61.2 75 49.3
QL04p064780 Quercus lobata HOM05D006964 ORTHO05D008861 4.4e-08 61.2 91 46.2
vmacro11021 Vaccinium macrocarpon HOM05D006964 ORTHO05D008861 4.4e-08 61.2 75 49.3
Aqoxy7G03560 Aquilegia oxysepala HOM05D006964 ORTHO05D008861 5.7e-08 60.8 75 52.0
CAN.G843.21 Capsicum annuum HOM05D006964 ORTHO05D008861 5.7e-08 60.8 75 52.0
Nitab4.5_0002450g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 5.7e-08 60.8 75 52.0
Peaxi162Scf00314g00515 Petunia axillaris HOM05D006964 ORTHO05D008861 5.7e-08 60.8 75 52.0
Potri.011G023800 Populus trichocarpa HOM05D006964 ORTHO05D008861 5.7e-08 60.8 75 54.7
QL04p064712 Quercus lobata HOM05D006964 ORTHO05D008861 5.7e-08 60.8 91 46.2
Rhsim02G0171800 Rhododendron simsii HOM05D006964 ORTHO05D008861 5.7e-08 60.8 75 49.3
Solyc03g118320.1 Solanum lycopersicum HOM05D006964 ORTHO05D008861 5.7e-08 60.8 75 52.0
Sopen03g037220 Solanum pennellii HOM05D006964 ORTHO05D008861 5.7e-08 60.8 75 52.0
PGSC0003DMG400014180 Solanum tuberosum HOM05D006964 ORTHO05D008861 5.7e-08 60.8 75 52.0
Hma1.2p1_0391F.1_g142860 Hydrangea macrophylla HOM05D006964 ORTHO05D008861 7.5e-08 60.5 75 52.0
Cpa.g.sc332.3 Carica papaya HOM05D006964 ORTHO05D008861 9.8e-08 60.1 91 46.2
HPP92_016414 Vanilla planifolia HOM05D006964 ORTHO05D008861 9.8e-08 60.1 75 49.3
Cc11_g00270 Coffea canephora HOM05D006964 ORTHO05D008861 1.3e-07 59.7 75 50.7
Nitab4.5_0000660g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 1.3e-07 59.7 75 50.7
ECA234G0414 Erigeron canadensis HOM05D006964 ORTHO05D008861 1.7e-07 59.3 72 47.2
MD03G1299000 Malus domestica HOM05D006964 ORTHO05D008861 1.7e-07 59.3 75 49.3
Manes.16G000700 Manihot esculenta HOM05D006964 ORTHO05D008861 1.7e-07 59.3 75 53.3
Oeu061991.1 Olea europaea HOM05D006964 ORTHO05D008861 1.7e-07 59.3 75 50.7
PGR031G2089 Punica granatum HOM05D006964 ORTHO05D008861 1.7e-07 59.3 75 50.7
RcHm_v2.0_Chr7g0233321 Rosa chinensis HOM05D006964 ORTHO05D008861 1.7e-07 59.3 75 52.0
AUR62003549 Chenopodium quinoa HOM05D006964 ORTHO05D008861 2.2e-07 58.9 95 43.2
ClCG07G011010 Citrullus lanatus HOM05D006964 ORTHO05D008861 2.2e-07 58.9 75 50.7
Lalb_Chr10g0101591 Lupinus albus HOM05D006964 ORTHO05D008861 2.2e-07 58.9 75 49.3
Nitab4.5_0000663g0200 Nicotiana tabacum HOM05D006964 ORTHO05D008861 2.2e-07 58.9 75 50.7
Sabra11G0014800 Salix brachista HOM05D006964 ORTHO05D008861 2.2e-07 58.9 75 52.0
GSVIVG01015905001 Vitis vinifera HOM05D006964 ORTHO05D008861 2.2e-07 58.9 75 50.7
COL.COLO4_20003 Corchorus olitorius HOM05D006964 ORTHO05D008861 2.8e-07 58.5 75 50.7
Nitab4.5_0004302g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 2.8e-07 58.5 75 50.7
arahy.Tifrunner.gnm1.ann1.3RSR9Y Arachis hypogaea HOM05D006964 ORTHO05D008861 3.7e-07 58.2 75 49.3
arahy.Tifrunner.gnm1.ann1.EIVX2Z Arachis hypogaea HOM05D006964 ORTHO05D008861 3.7e-07 58.2 75 49.3
CsaV3_4G007230 Cucumis sativus L. HOM05D006964 ORTHO05D008861 3.7e-07 58.2 75 50.7
FvH4_5g33930 Fragaria vesca HOM05D006964 ORTHO05D008861 3.7e-07 58.2 75 50.7
FAN08G0714 Fragaria x ananassa HOM05D006964 ORTHO05D008861 3.7e-07 58.2 75 50.7
HanXRQChr11g0342451 Helianthus annuus HOM05D006964 ORTHO05D008861 3.7e-07 58.2 75 45.3
Ca_06492_v3 Cicer arietinum L. HOM05D006964 ORTHO05D008861 4.9e-07 57.8 75 49.3
Ciclev10011398m.g Citrus clementina HOM05D006964 ORTHO05D008861 4.9e-07 57.8 75 52.0
Eucgr.A00951 Eucalyptus grandis HOM05D006964 ORTHO05D008861 4.9e-07 57.8 75 49.3
FAN18G1087 Fragaria x ananassa HOM05D006964 ORTHO05D008861 4.9e-07 57.8 75 49.3
Atru.chr8.1035 Acer truncatum HOM05D006964 ORTHO05D008861 6.3e-07 57.4 75 49.3
BcaB03g13997 Brassica carinata HOM05D006964 ORTHO05D008861 6.3e-07 57.4 75 50.7
Glyma.14G003100 Glycine max HOM05D006964 ORTHO05D008861 6.3e-07 57.4 75 48.0
Gohir.A08G050700 Gossypium hirsutum HOM05D006964 ORTHO05D008861 6.3e-07 57.4 75 50.7
Gohir.D08G060500 Gossypium hirsutum HOM05D006964 ORTHO05D008861 6.3e-07 57.4 75 50.7
Gorai.004G062600 Gossypium raimondii HOM05D006964 ORTHO05D008861 6.3e-07 57.4 75 50.7
SGA_v2.0_scaffold73G24408 Striga asiatica HOM05D006964 ORTHO05D008861 6.3e-07 57.4 75 49.3
SalBow7G2824 Salvia bowleyana HOM05D006964 ORTHO05D008861 8.3e-07 57.0 75 49.3
LjContig00081g0000792 Lotus japonicus HOM05D006964 ORTHO05D008861 1.1e-06 56.6 75 48.0
Medtr5g098850 Medicago truncatula HOM05D006964 ORTHO05D008861 1.1e-06 56.6 75 49.3
Psat2g001680 Pisum sativum HOM05D006964 ORTHO05D008861 1.1e-06 56.6 75 49.3
Sed0000140 Sechium edule HOM05D006964 ORTHO05D008861 1.1e-06 56.6 75 49.3
TPR.G35899 Trifolium pratense HOM05D006964 ORTHO05D008861 1.1e-06 56.6 75 49.3
AT1G24290 Arabidopsis thaliana HOM05D006964 ORTHO05D008861 1.4e-06 56.2 75 50.7
Carub.0001s2577 Capsella rubella HOM05D006964 ORTHO05D008861 1.4e-06 56.2 75 49.3
CiPaw.05G264600 Carya illinoinensis HOM05D006964 ORTHO05D008861 1.4e-06 56.2 75 49.3
AUR62017863 Chenopodium quinoa HOM05D006964 ORTHO05D008861 1.4e-06 56.2 95 40.0
Thecc.01G176000 Theobroma cacao HOM05D006964 ORTHO05D008861 1.4e-06 56.2 75 49.3
unitig_699.g19570 Utricularia gibba HOM05D006964 ORTHO05D008861 1.4e-06 56.2 75 48.0
AL1G40630 Arabidopsis lyrata HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
BcaC06g35275 Brassica carinata HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
A07p12030 Brassica napus HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
C07p17970 Brassica napus HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
BolC7t42303H Brassica oleracea HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
BraA07t28989Z Brassica rapa HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
CARHR026810 Cardamine hirsuta HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
Thhalv10009719m.g Eutrema salsugineum HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
Phvul.008G290000 Phaseolus vulgaris HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
Sp1g23470 Schrenkiella parvula HOM05D006964 ORTHO05D008861 1.8e-06 55.8 75 49.3
PGSC0003DMG400021041 Solanum tuberosum HOM05D006964 ORTHO05D008861 2.4e-06 55.5 72 51.4
PSO677G0001 Papaver somniferum HOM05D006964 ORTHO05D008861 3.1e-06 55.1 72 47.2
THA.LOC104827506 Tarenaya hassleriana HOM05D006964 ORTHO05D008861 5.4e-06 54.3 75 48.0
SHI28197 Sapria himalayana HOM05D006964 ORTHO05D008861 7.0e-06 53.9 75 48.0


User provided reference genes

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