Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01621 Aquilegia oxysepala HOM05D004422 ORTHO05D007331 3.2e-50 201.4 100 100.0
Aqoxy5G04133 Aquilegia oxysepala HOM05D004422 ORTHO05D007331 6.8e-45 183.7 90 98.9
TAR375G0769 Trochodendron aralioides HOM05D004422 ORTHO05D007331 2.9e-35 151.8 90 81.1
Haze_02852 Corylus avellana HOM05D004422 ORTHO05D007331 3.8e-35 151.4 90 78.9
QL09p024682 Quercus lobata HOM05D004422 ORTHO05D007331 4.9e-35 151.0 91 78.0
Cfa011065 Carpinus fangiana HOM05D004422 ORTHO05D007331 1.1e-34 149.8 90 77.8
QL10p000960 Quercus lobata HOM05D004422 ORTHO05D007331 1.4e-34 149.4 90 77.8
Duzib268G0035 Durio zibethinus HOM05D004422 ORTHO05D007331 7.1e-34 147.1 90 76.7
Thecc.01G395500 Theobroma cacao HOM05D004422 ORTHO05D007331 9.2e-34 146.7 90 77.8
GSVIVG01018288001 Vitis vinifera HOM05D004422 ORTHO05D007331 9.2e-34 146.7 90 76.7
Atru.chr5.121 Acer truncatum HOM05D004422 ORTHO05D007331 3.5e-33 144.8 90 77.8
PSO782G5506 Papaver somniferum HOM05D004422 ORTHO05D007331 3.5e-33 144.8 89 76.4
COL.COLO4_07155 Corchorus olitorius HOM05D004422 ORTHO05D007331 1.0e-32 143.3 90 71.1
Manes.05G055300 Manihot esculenta HOM05D004422 ORTHO05D007331 1.0e-32 143.3 90 74.4
Ciclev10018701m.g Citrus clementina HOM05D004422 ORTHO05D007331 1.3e-32 142.9 90 74.4
Gohir.A08G029300 Gossypium hirsutum HOM05D004422 ORTHO05D007331 1.7e-32 142.5 90 72.2
Gohir.D08G040000 Gossypium hirsutum HOM05D004422 ORTHO05D007331 2.3e-32 142.1 90 72.2
Gorai.004G038800 Gossypium raimondii HOM05D004422 ORTHO05D007331 2.3e-32 142.1 90 72.2
HanXRQChr16g0521111 Helianthus annuus HOM05D004422 ORTHO05D007331 3.9e-32 141.4 90 72.2
CiPaw.14G020100 Carya illinoinensis HOM05D004422 ORTHO05D007331 5.1e-32 141.0 90 74.4
TWI59G1250 Tripterygium wilfordii HOM05D004422 ORTHO05D007331 1.5e-31 139.4 90 73.3
Prupe.2G132400 Prunus persica HOM05D004422 ORTHO05D007331 1.9e-31 139.0 90 73.3
Nn1g00835 Nelumbo nucifera HOM05D004422 ORTHO05D007331 4.3e-31 137.9 90 72.2
Rhsim07G0036300 Rhododendron simsii HOM05D004422 ORTHO05D007331 4.3e-31 137.9 90 72.2
ECA234G0959 Erigeron canadensis HOM05D004422 ORTHO05D007331 5.6e-31 137.5 90 71.1
CsaV3_6G008710 Cucumis sativus L. HOM05D004422 ORTHO05D007331 7.3e-31 137.1 90 66.7
MD07G1109400 Malus domestica HOM05D004422 ORTHO05D007331 7.3e-31 137.1 90 73.3
Potri.014G049200 Populus trichocarpa HOM05D004422 ORTHO05D007331 7.3e-31 137.1 90 72.2
Sabra14G0035000 Salix brachista HOM05D004422 ORTHO05D007331 7.3e-31 137.1 90 72.2
unitig_0.g1355 Utricularia gibba HOM05D004422 ORTHO05D007331 9.6e-31 136.7 90 71.1
CANSAT25G3675 Cannabis sativa HOM05D004422 ORTHO05D007331 1.6e-30 136.0 90 70.0
Actinidia18350 Actinidia chinensis HOM05D004422 ORTHO05D007331 2.1e-30 135.6 90 71.1
CSS0020521 Camellia sinensis var. sinensis HOM05D004422 ORTHO05D007331 2.1e-30 135.6 90 70.0
MELO3C022290.2 Cucumis melo HOM05D004422 ORTHO05D007331 2.8e-30 135.2 90 65.6
Migut.B01531 Erythranthe guttata HOM05D004422 ORTHO05D007331 2.8e-30 135.2 90 70.0
THA.LOC104816999 Tarenaya hassleriana HOM05D004422 ORTHO05D007331 3.6e-30 134.8 90 68.9
Cc02_g25150 Coffea canephora HOM05D004422 ORTHO05D007331 4.8e-30 134.4 90 71.1
Sc12g0011040 Simmondsia chinensis HOM05D004422 ORTHO05D007331 4.8e-30 134.4 90 71.1
RcHm_v2.0_Chr1g0348021 Rosa chinensis HOM05D004422 ORTHO05D007331 6.2e-30 134.0 90 70.0
VMungo0331G0292 Vigna mungo HOM05D000002 ORTHO05D000001 8.1e-30 133.7 90 68.9
CANSAT25G3884 Cannabis sativa HOM05D004422 ORTHO05D007331 1.1e-29 133.3 90 68.9
CDE02G3124 Ceratophyllum demersum HOM05D004422 ORTHO05D007331 1.1e-29 133.3 90 71.1
Dinv43612 Davidia involucrata HOM05D004422 ORTHO05D007331 1.4e-29 132.9 112 62.5
FAN01G0685 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.4e-29 132.9 90 68.9
TPR.G33119 Trifolium pratense HOM05D004422 ORTHO05D007331 1.4e-29 132.9 90 67.8
FvH4_7g10270 Fragaria vesca HOM05D004422 ORTHO05D007331 2.4e-29 132.1 90 68.9
Lj3g0007750 Lotus japonicus HOM05D004422 ORTHO05D007331 2.4e-29 132.1 90 66.7
ClCG06G002430 Citrullus lanatus HOM05D004422 ORTHO05D007331 3.1e-29 131.7 90 63.3
Solyc01g090200.4 Solanum lycopersicum HOM05D004422 ORTHO05D007331 3.1e-29 131.7 90 67.8
Lsat_1_v5_gn_4_39461 Lactuca sativa HOM05D004422 ORTHO05D007331 4.0e-29 131.3 90 65.6
Sopen01g035990 Solanum pennellii HOM05D004422 ORTHO05D007331 4.0e-29 131.3 90 67.8
MSTRG.20687 Avicennia marina HOM05D004422 ORTHO05D007331 5.3e-29 131.0 90 68.9
Eucgr.H04784 Eucalyptus grandis HOM05D004422 ORTHO05D007331 9.0e-29 130.2 90 72.2
arahy.Tifrunner.gnm1.ann1.NVW2FV Arachis hypogaea HOM05D004422 ORTHO05D007331 1.2e-28 129.8 90 68.9
Nitab4.5_0000920g0050 Nicotiana tabacum HOM05D004422 ORTHO05D007331 1.2e-28 129.8 90 65.6
Nitab4.5_0002685g0030 Nicotiana tabacum HOM05D004422 ORTHO05D007331 1.2e-28 129.8 90 66.7
Medtr8g006955 Medicago truncatula HOM05D004422 ORTHO05D007331 1.5e-28 129.4 92 66.3
Oeu000053.1 Olea europaea HOM05D004422 ORTHO05D007331 1.5e-28 129.4 90 67.8
A07p29020 Brassica napus HOM05D004422 ORTHO05D007331 2.0e-28 129.0 90 62.2
C06p32790 Brassica napus HOM05D004422 ORTHO05D007331 2.0e-28 129.0 90 62.2
BolC6t38401H Brassica oleracea HOM05D004422 ORTHO05D007331 2.0e-28 129.0 90 62.2
BraA07t30542Z Brassica rapa HOM05D004422 ORTHO05D007331 2.0e-28 129.0 90 62.2
CAN.G1473.2 Capsicum annuum HOM05D004422 ORTHO05D007331 2.0e-28 129.0 90 66.7
CARHR156840 Cardamine hirsuta HOM05D004422 ORTHO05D007331 2.0e-28 129.0 90 61.1
Thhalv10018047m.g Eutrema salsugineum HOM05D004422 ORTHO05D007331 2.0e-28 129.0 90 63.3
Sed0020409 Sechium edule HOM05D004422 ORTHO05D007331 2.6e-28 128.6 90 62.2
Lj7C547G5 Lonicera japonica HOM05D004422 ORTHO05D007331 3.4e-28 128.3 104 59.6
SGA_v2.0_scaffold52G19227 Striga asiatica HOM05D004422 ORTHO05D007331 3.4e-28 128.3 90 67.8
BcaB02g07011 Brassica carinata HOM05D004422 ORTHO05D007331 4.4e-28 127.9 90 61.1
Aa31LG1G11470 Aethionema arabicum HOM05D004422 ORTHO05D007331 5.8e-28 127.5 90 62.2
Lalb_Chr07g0195401 Lupinus albus HOM05D004422 ORTHO05D007331 5.8e-28 127.5 90 65.6
Psat4g224760 Pisum sativum HOM05D004422 ORTHO05D007331 5.8e-28 127.5 90 65.6
Hund18610 Selenicereus undatus HOM05D004422 ORTHO05D007331 5.8e-28 127.5 90 66.7
Peaxi162Scf00475g00041 Petunia axillaris HOM05D004422 ORTHO05D007331 7.6e-28 127.1 90 64.4
Ca_25801_v3 Cicer arietinum L. HOM05D004422 ORTHO05D007331 1.3e-27 126.3 90 64.4
AT3G48110 Arabidopsis thaliana HOM05D004422 ORTHO05D007331 1.7e-27 125.9 89 62.9
Phvul.010G049401 Phaseolus vulgaris HOM05D004422 ORTHO05D007331 2.2e-27 125.6 90 66.7
SGA_v2.0_scaffold340G49325 Striga asiatica HOM05D004422 ORTHO05D007331 2.9e-27 125.2 90 64.4
Carub.0005s1422 Capsella rubella HOM05D004422 ORTHO05D007331 4.9e-27 124.4 90 62.2
AL5G27440 Arabidopsis lyrata HOM05D004422 ORTHO05D007331 8.4e-27 123.6 90 60.0
AUR62025581 Chenopodium quinoa HOM05D004422 ORTHO05D007331 8.4e-27 123.6 90 65.6
DCAR_029470 Daucus carota HOM05D004422 ORTHO05D007331 8.4e-27 123.6 93 66.7
FAN06G3830 Fragaria x ananassa HOM05D004422 ORTHO05D007331 8.4e-27 123.6 85 67.1
FAN03G1687 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.1e-26 123.2 85 65.9
EL10Ac7g18223 Beta vulgaris HOM05D004422 ORTHO05D007331 1.9e-26 122.5 90 63.3
Ah.15g094660 Amaranthus hybridus HOM05D004422 ORTHO05D007331 4.2e-26 121.3 90 62.2
Os06g0103600 Oryza sativa ssp. japonica HOM05D004422 ORTHO05D007331 2.1e-25 119.0 89 65.2
Zm00001eb379480 Zea mays HOM05D004422 ORTHO05D007331 2.1e-25 119.0 89 65.2
COL.COLO4_33296 Corchorus olitorius HOM05D004422 ORTHO05D007331 2.7e-25 118.6 81 63.0
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 6.0e-25 117.5 90 62.2
ATR0057G028 Amborella trichopoda HOM05D004422 ORTHO05D007331 1.5e-23 112.8 90 61.1
SEGI_01066 Sequoiadendron giganteum HOM05D004422 ORTHO05D007331 6.2e-22 107.5 89 57.3
HPP92_002531 Vanilla planifolia HOM05D004422 ORTHO05D007331 6.2e-22 107.5 89 55.1
QL04p030045 Quercus lobata HOM05D004422 ORTHO05D007331 2.6e-20 102.1 207 34.3
Pp3c1_42870 Physcomitrium patens HOM05D004422 ORTHO05D007331 3.4e-20 101.7 89 55.1
Mapoly0186s0003 Marchantia polymorpha HOM05D004422 ORTHO05D007331 1.3e-19 99.8 89 50.6
Cpa.g.sc22.56 Carica papaya HOM05D004422 ORTHO05D007331 1.2e-17 93.2 98 46.9
AagrBONN_evm.TU.Sc2ySwM_117.3818 Anthoceros agrestis HOM05D004422 ORTHO05D007331 2.7e-17 92.0 89 50.6
CBR_g19146 Chara braunii HOM05D004422 ORTHO05D007331 2.5e-15 85.5 88 45.5
Cre10.g433000 Chlamydomonas reinhardtii HOM05D004422 ORTHO05D007331 5.5e-10 67.8 79 45.6
PRCOL_00000491 Prasinoderma coloniale HOM05D004422 ORTHO05D007331 2.1e-09 65.9 97 42.3
COL.COLO4_30045 Corchorus olitorius HOM05D004422 ORTHO05D007331 5.7e-07 57.8 37 73.0


User provided reference genes

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