Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g081000 Amaranthus hybridus HOM05D005531 ORTHO05D006332 2.0e-86 322.4 161 100.0
Hund12388 Selenicereus undatus HOM05D005531 ORTHO05D006332 4.3e-33 145.2 119 61.3
EL10Ac3g06068 Beta vulgaris HOM05D005531 ORTHO05D006332 2.8e-32 142.5 108 67.6
Migut.N03071 Erythranthe guttata HOM05D005531 ORTHO05D006332 1.2e-27 127.1 98 65.3
Actinidia12100 Actinidia chinensis HOM05D005531 ORTHO05D006332 2.1e-27 126.3 107 63.6
SGA_v2.0_scaffold25G10999 Striga asiatica HOM05D005531 ORTHO05D006332 2.7e-27 125.9 97 64.9
TAR362G0104 Trochodendron aralioides HOM05D005531 ORTHO05D006332 6.1e-27 124.8 117 59.8
Atru.chr4.1396 Acer truncatum HOM05D005531 ORTHO05D006332 7.9e-27 124.4 130 53.8
Dinv09088 Davidia involucrata HOM05D005531 ORTHO05D006332 7.9e-27 124.4 117 58.1
GSVIVG01038136001 Vitis vinifera HOM05D005531 ORTHO05D006332 1.8e-26 123.2 94 68.1
CSS0024284 Camellia sinensis var. sinensis HOM05D005531 ORTHO05D006332 8.8e-26 120.9 116 58.6
Duzib151G0770 Durio zibethinus HOM05D005531 ORTHO05D006332 1.1e-25 120.6 111 57.7
PGR042G0031 Punica granatum HOM05D005531 ORTHO05D006332 2.5e-25 119.4 98 63.3
Aqoxy1G02291 Aquilegia oxysepala HOM05D005531 ORTHO05D006332 3.3e-25 119.0 117 54.7
Rhsim02G0083700 Rhododendron simsii HOM05D005531 ORTHO05D006332 3.3e-25 119.0 114 58.8
Aa31LG10G7090 Aethionema arabicum HOM05D005531 ORTHO05D006332 4.3e-25 118.6 120 56.7
Thecc.04G166800 Theobroma cacao HOM05D005531 ORTHO05D006332 7.4e-25 117.9 120 55.8
Cpa.g.sc9.359 Carica papaya HOM05D005531 ORTHO05D006332 9.7e-25 117.5 115 56.5
Peaxi162Scf00568g00522 Petunia axillaris HOM05D005531 ORTHO05D006332 9.7e-25 117.5 115 56.5
Oeu021570.1 Olea europaea HOM05D005531 ORTHO05D006332 1.7e-24 116.7 97 61.9
MSTRG.22027 Avicennia marina HOM05D005531 ORTHO05D006332 2.8e-24 115.9 99 61.6
CARHR161680 Cardamine hirsuta HOM05D005531 ORTHO05D006332 3.7e-24 115.5 125 52.8
COL.COLO4_07535 Corchorus olitorius HOM05D005531 ORTHO05D006332 3.7e-24 115.5 62 88.7
Gohir.A02G090900 Gossypium hirsutum HOM05D005531 ORTHO05D006332 3.7e-24 115.5 91 63.7
Gohir.D02G109600 Gossypium hirsutum HOM05D005531 ORTHO05D006332 3.7e-24 115.5 91 63.7
Gorai.005G123800 Gossypium raimondii HOM05D005531 ORTHO05D006332 3.7e-24 115.5 91 63.7
CiPaw.01G171100 Carya illinoinensis HOM05D005531 ORTHO05D006332 4.8e-24 115.2 117 56.4
Manes.04G036700 Manihot esculenta HOM05D005531 ORTHO05D006332 4.8e-24 115.2 122 55.7
TWI15G0620 Tripterygium wilfordii HOM05D005531 ORTHO05D006332 4.8e-24 115.2 67 82.1
A09p45110 Brassica napus HOM05D005531 ORTHO05D006332 6.3e-24 114.8 116 57.8
HanXRQChr14g0432131 Helianthus annuus HOM05D005531 ORTHO05D006332 6.3e-24 114.8 130 52.3
SalBow6G4103 Salvia bowleyana HOM05D005531 ORTHO05D006332 6.3e-24 114.8 98 61.2
Cfa015263 Carpinus fangiana HOM05D005531 ORTHO05D006332 1.1e-23 114.0 117 53.0
ClCG04G002830 Citrullus lanatus HOM05D005531 ORTHO05D006332 1.1e-23 114.0 81 70.4
Prupe.1G206500 Prunus persica HOM05D005531 ORTHO05D006332 1.1e-23 114.0 62 87.1
Sed0016017 Sechium edule HOM05D005531 ORTHO05D006332 1.4e-23 113.6 81 70.4
Nn7g37674 Nelumbo nucifera HOM05D005531 ORTHO05D006332 1.8e-23 113.2 62 87.1
Phvul.003G296200 Phaseolus vulgaris HOM05D005531 ORTHO05D006332 1.8e-23 113.2 124 52.4
QL93p1902_0765 Quercus lobata HOM05D005531 ORTHO05D006332 2.4e-23 112.8 62 87.1
BolC8t50347H Brassica oleracea HOM05D005531 ORTHO05D006332 3.1e-23 112.5 122 54.1
ECA238G0637 Erigeron canadensis HOM05D005531 ORTHO05D006332 4.1e-23 112.1 62 85.5
FvH4_5g12060 Fragaria vesca HOM05D005531 ORTHO05D006332 4.1e-23 112.1 62 85.5
FAN04G0151 Fragaria x ananassa HOM05D005531 ORTHO05D006332 4.1e-23 112.1 62 85.5
FAN08G1892 Fragaria x ananassa HOM05D005531 ORTHO05D006332 4.1e-23 112.1 62 85.5
FAN18G3014 Fragaria x ananassa HOM05D005531 ORTHO05D006332 4.1e-23 112.1 62 85.5
FAN18G3485 Fragaria x ananassa HOM05D005531 ORTHO05D006332 4.1e-23 112.1 62 85.5
RcHm_v2.0_Chr4g0406021 Rosa chinensis HOM05D005531 ORTHO05D006332 4.1e-23 112.1 62 85.5
Sopen03g015200 Solanum pennellii HOM05D005531 ORTHO05D006332 4.1e-23 112.1 131 51.9
arahy.Tifrunner.gnm1.ann1.6AY0JN Arachis hypogaea HOM05D005531 ORTHO05D006332 5.3e-23 111.7 67 79.1
C08p27300 Brassica napus HOM05D005531 ORTHO05D006332 5.3e-23 111.7 117 57.3
Lsat_1_v5_gn_2_38340 Lactuca sativa HOM05D005531 ORTHO05D006332 5.3e-23 111.7 97 59.8
arahy.Tifrunner.gnm1.ann1.77ZG52 Arachis hypogaea HOM05D005531 ORTHO05D006332 6.9e-23 111.3 65 81.5
CSS0025079 Camellia sinensis var. sinensis HOM05D005531 ORTHO05D006332 9.1e-23 110.9 85 68.2
AT3G52050 Arabidopsis thaliana HOM05D005531 ORTHO05D006332 1.2e-22 110.5 129 50.4
Cc01_g03590 Coffea canephora HOM05D005531 ORTHO05D006332 1.2e-22 110.5 62 83.9
Sp5g10250 Schrenkiella parvula HOM05D005531 ORTHO05D006332 1.2e-22 110.5 64 82.8
THA.LOC104817577 Tarenaya hassleriana HOM05D005531 ORTHO05D006332 1.2e-22 110.5 69 79.7
Ca_18643_v3 Cicer arietinum L. HOM05D005531 ORTHO05D006332 1.5e-22 110.2 91 62.6
Eucgr.A00006 Eucalyptus grandis HOM05D005531 ORTHO05D006332 1.5e-22 110.2 97 58.8
BcaNung06967 Brassica carinata HOM05D005531 ORTHO05D006332 2.0e-22 109.8 69 76.8
Medtr4g087250 Medicago truncatula HOM05D005531 ORTHO05D006332 2.0e-22 109.8 73 69.9
Carub.0005s1837 Capsella rubella HOM05D005531 ORTHO05D006332 2.6e-22 109.4 129 48.1
FAN13G1713 Fragaria x ananassa HOM05D005531 ORTHO05D006332 2.6e-22 109.4 62 82.3
MELO3C033213.2 Cucumis melo HOM05D005531 ORTHO05D006332 3.4e-22 109.0 81 66.7
Thhalv10010410m.g Eutrema salsugineum HOM05D005531 ORTHO05D006332 3.4e-22 109.0 130 51.5
Psat7g121280 Pisum sativum HOM05D005531 ORTHO05D006332 3.4e-22 109.0 71 74.6
Potri.013G125700 Populus trichocarpa HOM05D005531 ORTHO05D006332 3.4e-22 109.0 128 47.7
CANSAT54G2817 Cannabis sativa HOM05D005531 ORTHO05D006332 4.5e-22 108.6 124 50.8
CAN.G87.3 Capsicum annuum HOM05D005531 ORTHO05D006332 4.5e-22 108.6 61 83.6
Lalb_Chr16g0384491 Lupinus albus HOM05D005531 ORTHO05D006332 4.5e-22 108.6 125 50.4
MD04G1048800 Malus domestica HOM05D005531 ORTHO05D006332 5.9e-22 108.2 63 85.7
QL10p054599 Quercus lobata HOM05D005531 ORTHO05D006332 5.9e-22 108.2 63 85.7
TPR.G23541 Trifolium pratense HOM05D005531 ORTHO05D006332 5.9e-22 108.2 81 66.7
Lj4g0014314 Lotus japonicus HOM05D005531 ORTHO05D006332 7.7e-22 107.8 60 81.7
AL5G32590 Arabidopsis lyrata HOM05D005531 ORTHO05D006332 1.0e-21 107.5 99 55.6
Glyma.07G208400 Glycine max HOM05D005531 ORTHO05D006332 1.0e-21 107.5 86 62.8
Sabra13G0104500 Salix brachista HOM05D005531 ORTHO05D006332 3.8e-21 105.5 126 46.8
BraA09t39972Z Brassica rapa HOM05D005531 ORTHO05D006332 6.5e-21 104.8 129 51.2
CsaV3_4G029900 Cucumis sativus L. HOM05D005531 ORTHO05D006332 6.5e-21 104.8 81 64.2
Glyma.02G137000 Glycine max HOM05D005531 ORTHO05D006332 8.5e-21 104.4 60 80.0
ATR0743G039 Amborella trichopoda HOM05D005531 ORTHO05D006332 3.2e-20 102.4 61 70.5
MD17G1177600 Malus domestica HOM05D005531 ORTHO05D006332 3.2e-20 102.4 63 79.4
Nitab4.5_0005427g0050 Nicotiana tabacum HOM05D005531 ORTHO05D006332 4.2e-20 102.1 56 85.7
CDE07G1035 Ceratophyllum demersum HOM05D005531 ORTHO05D006332 2.1e-19 99.8 71 63.4
HPP92_024943 Vanilla planifolia HOM05D005531 ORTHO05D006332 2.1e-19 99.8 91 54.9
MBI08_g25563_MAGBIO Magnolia biondii HOM05D005531 ORTHO05D006332 3.6e-19 99.0 62 72.6
BcaB01g00451 Brassica carinata HOM05D005531 ORTHO05D006332 7.9e-19 97.8 57 80.7
PSO675G8407 Papaver somniferum HOM05D005531 ORTHO05D006332 7.9e-19 97.8 123 50.4
Os03g0227300 Oryza sativa ssp. japonica HOM05D005531 ORTHO05D006332 8.8e-18 94.4 109 43.1
C07p46750 Brassica napus HOM05D005531 ORTHO05D006332 1.5e-17 93.6 71 69.0
BolC7t45193H Brassica oleracea HOM05D005531 ORTHO05D006332 1.5e-17 93.6 71 69.0
SEGI_01886 Sequoiadendron giganteum HOM05D005531 ORTHO05D006332 2.6e-17 92.8 74 58.1
HPP92_024926 Vanilla planifolia HOM05D005531 ORTHO05D006332 3.3e-17 92.4 57 70.2
DCAR_028442 Daucus carota HOM05D005531 ORTHO05D006332 7.4e-17 91.3 50 80.0
PSO017G5810 Papaver somniferum HOM05D005531 ORTHO05D006332 1.7e-16 90.1 112 49.1
PSO675G6185 Papaver somniferum HOM05D005531 ORTHO05D006332 2.4e-15 86.3 114 50.0
SMO232G0046 Selaginella moellendorffii HOM05D005531 ORTHO05D006332 2.6e-14 82.8 69 50.7
Ah.13g066200 Amaranthus hybridus HOM05D012836 ORTHO05D006332 2.5e-12 76.3 118 42.4
Ah.02g119680 Amaranthus hybridus HOM05D014553 ORTHO05D018255 3.2e-12 75.9 49 73.5
VMungo0251G0293 Vigna mungo HOM05D005531 ORTHO05D006332 3.2e-12 75.9 60 65.0
Ah.02g127550 Amaranthus hybridus HOM05D012836 ORTHO05D015817 5.2e-10 68.6 29 100.0
Pp3c16_17520 Physcomitrium patens HOM05D005531 ORTHO05D006332 5.2e-10 68.6 62 48.4
AagrBONN_evm.TU.Sc2ySwM_228.1809 Anthoceros agrestis HOM05D005531 ORTHO05D006332 3.3e-09 65.9 77 44.2
AagrBONN_evm.TU.Sc2ySwM_228.5815 Anthoceros agrestis HOM05D005531 ORTHO05D006332 3.3e-09 65.9 61 52.5
Ah.13g077250 Amaranthus hybridus HOM05D012836 ORTHO05D015817 5.7e-09 65.1 29 93.1
Ah.15g099580 Amaranthus hybridus HOM05D012836 ORTHO05D015817 5.7e-09 65.1 35 80.0
Ah.06g186580 Amaranthus hybridus HOM05D012836 ORTHO05D015817 7.4e-09 64.7 28 96.4
Ah.00g000960 Amaranthus hybridus HOM05D006926 ORTHO05D008863 9.7e-09 64.3 28 96.4
Ah.02g111940 Amaranthus hybridus HOM05D012836 ORTHO05D015817 1.7e-08 63.5 26 100.0
Ah.07g197290 Amaranthus hybridus HOM05D012836 ORTHO05D015817 1.7e-08 63.5 26 100.0
Ah.08g216780 Amaranthus hybridus HOM05D006077 ORTHO05D007499 6.3e-08 61.6 27 92.6
Ah.12g059420 Amaranthus hybridus HOM05D001153 ORTHO05D000949 6.3e-08 61.6 30 86.7
Ah.11g040230 Amaranthus hybridus HOM05D012836 ORTHO05D015817 8.2e-08 61.2 26 96.2
Ah.05g178360 Amaranthus hybridus HOM05D012836 ORTHO05D015817 1.8e-07 60.1 26 96.2
Ah.06g188420 Amaranthus hybridus HOM05D012836 ORTHO05D015817 1.8e-07 60.1 27 88.9
Ah.07g205670 Amaranthus hybridus HOM05D000036 ORTHO05D000095 1.8e-07 60.1 35 68.6
Ah.01g002020 Amaranthus hybridus HOM05D004274 ORTHO05D004980 3.1e-07 59.3 40 65.0
Ah.10g030750 Amaranthus hybridus HOM05D004804 ORTHO05D005882 3.1e-07 59.3 28 85.7
Ah.15g092900 Amaranthus hybridus HOM05D012836 ORTHO05D015817 7.0e-07 58.2 26 92.3
Ah.10g032970 Amaranthus hybridus HOM05D012836 ORTHO05D006332 3.5e-06 55.8 24 91.7
SHI30282 Sapria himalayana HOM05D005531 ORTHO05D006332 4.5e-06 55.5 26 88.5


User provided reference genes

Program Settings