Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g047930 Amaranthus hybridus HOM05D004839 ORTHO05D006012 0.0e+00 1092.0 630 100.0
EL10Ac5g11115 Beta vulgaris HOM05D004839 ORTHO05D006012 1.0e-258 896.7 632 84.5
AUR62008513 Chenopodium quinoa HOM05D004839 ORTHO05D006012 5.1e-239 831.2 554 83.6
AUR62021577 Chenopodium quinoa HOM05D004839 ORTHO05D006012 1.5e-238 829.7 589 83.9
Sc04g0004870 Simmondsia chinensis HOM05D004839 ORTHO05D006012 1.2e-203 713.8 632 67.6
Hund02595 Selenicereus undatus HOM05D004839 ORTHO05D006012 4.5e-203 711.8 684 67.8
Dinv17400 Davidia involucrata HOM05D004839 ORTHO05D006012 3.6e-184 649.0 633 64.1
Ciclev10019267m.g Citrus clementina HOM05D004839 ORTHO05D006012 6.0e-179 631.7 645 64.5
TWI81G0494 Tripterygium wilfordii HOM05D004839 ORTHO05D006012 1.0e-178 630.9 636 66.2
QL10p019188 Quercus lobata HOM05D004839 ORTHO05D006012 4.3e-177 625.5 638 63.5
Dinv10521 Davidia involucrata HOM05D004839 ORTHO05D006012 1.3e-173 614.0 547 68.2
PGR044G2204 Punica granatum HOM05D004839 ORTHO05D006012 3.7e-173 612.5 648 61.0
Haze_07703 Corylus avellana HOM05D004839 ORTHO05D006012 1.6e-171 607.1 640 63.9
CiPaw.11G051800 Carya illinoinensis HOM05D004839 ORTHO05D006012 5.1e-170 602.1 641 65.4
Gohir.A12G181900 Gossypium hirsutum HOM05D004839 ORTHO05D006012 6.6e-170 601.7 643 60.2
Gorai.008G198100 Gossypium raimondii HOM05D004839 ORTHO05D006012 2.5e-169 599.7 643 59.9
Gohir.D12G184700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 3.6e-168 595.9 643 59.6
TAR622G0763 Trochodendron aralioides HOM05D004839 ORTHO05D006012 3.6e-168 595.9 634 60.3
Duzib205G0813 Durio zibethinus HOM05D004839 ORTHO05D006012 1.8e-167 593.6 640 60.8
Manes.14G084900 Manihot esculenta HOM05D004839 ORTHO05D006012 3.1e-167 592.8 639 61.3
TAR374G0643 Trochodendron aralioides HOM05D004839 ORTHO05D006012 2.0e-166 590.1 635 60.2
FAN08G2012 Fragaria x ananassa HOM05D004839 ORTHO05D006012 5.4e-164 582.0 640 64.1
Atru.chr9.403 Acer truncatum HOM05D004839 ORTHO05D006012 1.0e-162 577.8 642 61.2
FvH4_5g14030 Fragaria vesca HOM05D004839 ORTHO05D006012 1.3e-162 577.4 639 63.7
Nn4g23407 Nelumbo nucifera HOM05D004839 ORTHO05D006012 8.7e-162 574.7 633 58.3
CSS0002450 Camellia sinensis var. sinensis HOM05D004839 ORTHO05D006012 1.6e-160 570.5 639 62.0
Actinidia25779 Actinidia chinensis HOM05D004839 ORTHO05D006012 1.1e-159 567.8 636 59.4
Manes.06G085750 Manihot esculenta HOM05D004839 ORTHO05D006012 2.4e-159 566.6 693 55.1
MBI16_g41829_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 4.0e-159 565.8 533 64.0
ClCG04G011890 Citrullus lanatus HOM05D004839 ORTHO05D006012 1.2e-158 564.3 540 63.5
Lj1g0002650 Lotus japonicus HOM05D004839 ORTHO05D006012 2.0e-158 563.5 524 62.8
Eucgr.K02520 Eucalyptus grandis HOM05D004839 ORTHO05D006012 2.6e-158 563.1 642 58.3
Thecc.03G099900 Theobroma cacao HOM05D004839 ORTHO05D006012 2.6e-158 563.1 502 64.7
Cc04_g13220 Coffea canephora HOM05D004839 ORTHO05D006012 1.3e-157 560.8 638 58.6
Sabra12G0046900 Salix brachista HOM05D004839 ORTHO05D006012 1.3e-157 560.8 633 58.1
GSVIVG01007883001 Vitis vinifera HOM05D004839 ORTHO05D006012 1.4e-156 557.4 531 63.3
SalBow5G5272 Salvia bowleyana HOM05D004839 ORTHO05D006012 5.4e-156 555.4 639 58.8
arahy.Tifrunner.gnm1.ann1.PN7U9Z Arachis hypogaea HOM05D004839 ORTHO05D006012 1.6e-155 553.9 533 63.2
Potri.012G065600 Populus trichocarpa HOM05D004839 ORTHO05D006012 1.6e-155 553.9 531 63.1
arahy.Tifrunner.gnm1.ann1.8FG0EB Arachis hypogaea HOM05D004839 ORTHO05D006012 4.6e-155 552.4 553 61.7
Prupe.5G203800 Prunus persica HOM05D004839 ORTHO05D006012 1.7e-154 550.4 533 63.4
Lj5A104T41 Lonicera japonica HOM05D004839 ORTHO05D006012 9.6e-153 544.7 636 55.8
MELO3C002019.2 Cucumis melo HOM05D004839 ORTHO05D006012 3.6e-152 542.7 541 62.1
Glyma.06G202100 Glycine max HOM05D004839 ORTHO05D006012 6.2e-152 542.0 568 58.6
Lalb_Chr07g0184911 Lupinus albus HOM05D004839 ORTHO05D006012 1.1e-151 541.2 536 61.0
MSTRG.11357 Avicennia marina HOM05D004839 ORTHO05D006012 1.4e-151 540.8 635 58.6
MD14G1210500 Malus domestica HOM05D004839 ORTHO05D006012 1.4e-151 540.8 530 63.6
Migut.D01694 Erythranthe guttata HOM05D004839 ORTHO05D006012 1.8e-151 540.4 638 55.5
Nitab4.5_0001410g0060 Nicotiana tabacum HOM05D004839 ORTHO05D006012 2.4e-151 540.0 666 57.8
CDE04G3432 Ceratophyllum demersum HOM05D004839 ORTHO05D006012 3.1e-151 539.7 519 61.7
Glyma.04G163400 Glycine max HOM05D004839 ORTHO05D006012 4.0e-151 539.3 528 61.0
TPR.G11937 Trifolium pratense HOM05D004839 ORTHO05D006012 6.9e-151 538.5 534 61.8
ECA246G0121 Erigeron canadensis HOM05D004839 ORTHO05D006012 2.6e-150 536.6 629 56.6
Actinidia04835 Actinidia chinensis HOM05D004839 ORTHO05D006012 1.3e-149 534.3 393 74.0
Lalb_Chr13g0296121 Lupinus albus HOM05D004839 ORTHO05D006012 2.2e-149 533.5 448 66.3
Phvul.009G192800 Phaseolus vulgaris HOM05D004839 ORTHO05D006012 2.2e-149 533.5 429 68.1
Lsat_1_v5_gn_1_13541 Lactuca sativa HOM05D004839 ORTHO05D006012 1.4e-148 530.8 532 59.8
FAN13G1538 Fragaria x ananassa HOM05D004839 ORTHO05D006012 1.9e-148 530.4 516 63.0
VMungo1309G1059 Vigna mungo HOM05D004839 ORTHO05D006012 5.5e-148 528.9 530 60.0
HanXRQChr05g0157271 Helianthus annuus HOM05D004839 ORTHO05D006012 2.7e-147 526.6 639 60.7
Solyc03g115240.4 Solanum lycopersicum HOM05D004839 ORTHO05D006012 6.0e-147 525.4 518 60.8
CsaV3_1G005900 Cucumis sativus L. HOM05D000422 ORTHO05D003570 3.9e-146 522.7 533 61.0
Aqoxy3G03618 Aquilegia oxysepala HOM05D004839 ORTHO05D006012 1.5e-145 520.8 632 54.9
Sopen03g034280 Solanum pennellii HOM05D004839 ORTHO05D006012 3.3e-145 519.6 517 60.9
THA.LOC104818342 Tarenaya hassleriana HOM05D004839 ORTHO05D006012 1.3e-144 517.7 638 53.1
CAN.G479.17 Capsicum annuum HOM05D004839 ORTHO05D006012 1.6e-144 517.3 663 55.4
Nitab4.5_0001485g0220 Nicotiana tabacum HOM05D004839 ORTHO05D006012 6.2e-144 515.4 570 61.8
MSTRG.22981 Avicennia marina HOM05D004839 ORTHO05D006012 8.1e-144 515.0 487 63.0
HPP92_018601 Vanilla planifolia HOM05D004839 ORTHO05D006012 1.1e-143 514.6 526 57.2
Lsat_1_v5_gn_5_23161 Lactuca sativa HOM05D004839 ORTHO05D006012 4.5e-142 509.2 641 54.4
Sed0023482 Sechium edule HOM05D004839 ORTHO05D006012 7.6e-142 508.4 536 58.6
RcHm_v2.0_Chr7g0182791 Rosa chinensis HOM05D004839 ORTHO05D006012 1.7e-141 507.3 639 59.2
Oeu001010.1 Olea europaea HOM05D004839 ORTHO05D006012 3.8e-141 506.1 645 51.5
Peaxi162Scf00201g10021 Petunia axillaris HOM05D004839 ORTHO05D006012 4.6e-139 499.2 420 68.6
MD06G1201400 Malus domestica HOM05D004839 ORTHO05D006012 6.0e-139 498.8 531 59.9
DCAR_023142 Daucus carota HOM05D004839 ORTHO05D006012 7.9e-139 498.4 608 54.8
Psat0s569g0080 Pisum sativum HOM05D004839 ORTHO05D006012 1.0e-138 498.0 531 58.4
Ca_02963_v3 Cicer arietinum L. HOM05D004839 ORTHO05D006012 2.5e-137 493.4 482 61.6
PSO478G1197 Papaver somniferum HOM05D004839 ORTHO05D006012 2.5e-137 493.4 567 59.1
PSO017G5800 Papaver somniferum HOM05D004839 ORTHO05D006012 1.6e-136 490.7 574 58.0
Sed0026784 Sechium edule HOM05D004839 ORTHO05D006012 2.1e-136 490.3 514 62.1
Medtr3g024380 Medicago truncatula HOM05D004839 ORTHO05D006012 8.4e-133 478.4 533 55.7
Lalb_Chr07g0184901 Lupinus albus HOM05D004839 ORTHO05D006012 1.1e-132 478.0 534 56.4
Medtr3g024360 Medicago truncatula HOM05D004839 ORTHO05D006012 1.1e-129 468.0 533 55.2
unitig_749.g13436 Utricularia gibba HOM05D004839 ORTHO05D006012 7.4e-129 465.3 565 52.7
vmacro16504 Vaccinium macrocarpon HOM05D004839 ORTHO05D006012 1.8e-127 460.7 594 50.3
ATR0064G044 Amborella trichopoda HOM05D004839 ORTHO05D006012 1.9e-124 450.7 350 68.9
Zm00001eb298660 Zea mays HOM05D004839 ORTHO05D006012 2.5e-124 450.3 592 51.4
SGA_v2.0_scaffold114G31924 Striga asiatica HOM05D004839 ORTHO05D006012 1.6e-123 447.6 679 48.0
Carub.0008s2182 Capsella rubella HOM05D004839 ORTHO05D006012 3.0e-122 443.4 528 54.7
Aa31LG11G2200 Aethionema arabicum HOM05D004839 ORTHO05D006012 2.2e-120 437.2 667 52.3
Os12g0579000 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 1.8e-119 434.1 464 56.0
Zm00001eb118140 Zea mays HOM05D004839 ORTHO05D006012 7.7e-118 428.7 604 49.8
GSVIVG01007906001 Vitis vinifera HOM05D004839 ORTHO05D006012 2.9e-117 426.8 372 65.9
AT5G61150 Arabidopsis thaliana HOM05D004839 ORTHO05D006012 1.4e-116 424.5 644 52.8
SEGI_03099 Sequoiadendron giganteum HOM05D004839 ORTHO05D006012 8.8e-114 415.2 531 55.9
Thhalv10003808m.g Eutrema salsugineum HOM05D004839 ORTHO05D006012 2.2e-112 410.6 662 51.4
AL8G37800 Arabidopsis lyrata HOM05D004839 ORTHO05D006012 5.3e-111 406.0 638 50.6
Sp2g24400 Schrenkiella parvula HOM05D004839 ORTHO05D006012 3.5e-110 403.3 650 47.2
BolC2t12188H Brassica oleracea HOM05D004839 ORTHO05D006012 7.7e-110 402.1 531 51.4
COL.COLO4_37593 Corchorus olitorius HOM05D004839 ORTHO05D006012 1.1e-108 398.3 504 51.6
A09p07230 Brassica napus HOM05D004839 ORTHO05D006012 1.9e-108 397.5 642 48.4
C02p61390 Brassica napus HOM05D004839 ORTHO05D006012 5.5e-108 396.0 519 52.0
CARHR274840 Cardamine hirsuta HOM05D004839 ORTHO05D006012 4.0e-106 389.8 639 49.5
C09p08080 Brassica napus HOM05D004839 ORTHO05D006012 1.4e-103 381.3 644 47.8
BolC9t53722H Brassica oleracea HOM05D004839 ORTHO05D006012 7.0e-103 379.0 651 47.3
BcaC04g23462 Brassica carinata HOM05D004839 ORTHO05D006012 1.6e-102 377.9 644 47.4
Gohir.D13G091100 Gossypium hirsutum HOM05D004839 ORTHO05D006012 4.5e-102 376.3 375 62.7
Gohir.D07G141700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 5.9e-102 375.9 375 62.4
Gohir.D12G082100 Gossypium hirsutum HOM05D004839 ORTHO05D006012 5.9e-102 375.9 375 62.7
Gohir.D12G082302 Gossypium hirsutum HOM05D004839 ORTHO05D006012 5.9e-102 375.9 375 62.4
BraA09t36373Z Brassica rapa HOM05D004839 ORTHO05D006012 1.8e-98 364.4 535 52.7
A02p41460 Brassica napus HOM05D004839 ORTHO05D006012 2.3e-98 364.0 528 48.3
Os07g0109600 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 6.3e-96 355.9 335 60.6
Os03g0756500 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 2.5e-92 344.0 355 54.4
Nn030s41597 Nelumbo nucifera HOM05D004839 ORTHO05D006012 1.6e-91 341.3 313 63.3
Mapoly0001s0516 Marchantia polymorpha HOM05D004839 ORTHO05D006012 1.4e-87 328.2 339 52.8
AagrBONN_evm.TU.Sc2ySwM_228.780 Anthoceros agrestis HOM05D004839 ORTHO05D006012 3.6e-83 313.5 348 51.7
Pp3c14_2440 Physcomitrium patens HOM05D004839 ORTHO05D006012 1.0e-82 312.0 532 46.8
MBI05_g39010_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 3.2e-79 300.4 519 47.2
SMO301G0010 Selaginella moellendorffii HOM05D004839 ORTHO05D006012 1.5e-73 281.6 387 47.5
MSTRG.22984 Avicennia marina HOM05D004839 ORTHO05D006012 6.2e-67 259.6 397 44.3
SGA_v2.0_scaffold313G48307 Striga asiatica HOM05D004839 ORTHO05D006012 5.2e-66 256.5 468 41.2
Migut.I00327 Erythranthe guttata HOM05D004839 ORTHO05D006012 1.3e-61 241.9 517 37.9
CBR_g54910 Chara braunii HOM05D004839 ORTHO05D000002 8.4e-56 222.6 282 47.2
MBI05_g05675_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 2.8e-51 207.6 510 39.2
Oeu001821.1 Olea europaea HOM05D004839 ORTHO05D006012 5.2e-50 203.4 329 40.4
RhsimUnG0229200 Rhododendron simsii HOM05D004839 ORTHO05D006012 4.9e-48 196.8 267 52.8
arahy.Tifrunner.gnm1.ann1.YGY8HB Arachis hypogaea HOM05D010000 ORTHO05D006012 3.3e-44 184.1 166 61.4
MD06G1201100 Malus domestica HOM05D004839 ORTHO05D006012 1.5e-41 175.3 136 70.6
Gohir.D01G045700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 7.6e-41 172.9 236 50.4
Lsat_1_v5_gn_3_57821 Lactuca sativa HOM05D004839 ORTHO05D006012 2.1e-38 164.9 103 76.7
Oeu008253.1 Olea europaea HOM05D004839 ORTHO05D006012 5.8e-33 146.7 161 57.8
MCO04G392 Micromonas commoda HOM05D004839 ORTHO05D006012 1.6e-30 138.7 324 34.3
Oeu022173.1 Olea europaea HOM05D004839 ORTHO05D006012 2.3e-29 134.8 261 39.5
Cre16.g694204 Chlamydomonas reinhardtii HOM05D004839 ORTHO05D006012 7.4e-28 129.8 260 34.6
SalBow5G1942 Salvia bowleyana HOM05D004839 ORTHO05D006012 1.7e-24 118.6 417 35.0
arahy.Tifrunner.gnm1.ann1.WE96GU Arachis hypogaea HOM05D004839 ORTHO05D006012 1.1e-18 99.4 155 48.4
Cpa.g.c41089 Carica papaya HOM05D004839 ORTHO05D006012 4.1e-18 97.4 91 58.2
MD06G1201000 Malus domestica HOM05D004839 ORTHO05D006012 1.3e-16 92.4 61 75.4
Peaxi162Scf00201g00231 Petunia axillaris HOM05D004839 ORTHO05D006012 3.6e-14 84.3 53 69.8
Peaxi162Scf00201g00230 Petunia axillaris HOM05D004839 ORTHO05D006012 4.3e-12 77.4 41 87.8
Cpa.g.c34487 Carica papaya HOM05D004839 ORTHO05D006012 3.4e-09 67.8 154 62.3
MD06G1200900 Malus domestica HOM05D004839 ORTHO05D006012 1.0e-08 66.2 123 46.3
arahy.Tifrunner.gnm1.ann1.EPA5QP Arachis hypogaea HOM05D004839 ORTHO05D004485 1.4e-07 62.4 43 72.1
Gorai.011G032300 Gossypium raimondii HOM05D004839 ORTHO05D006012 2.5e-07 61.6 137 38.7


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