Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 7.0e-187 657.1 331 100.0
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 2.1e-167 592.4 334 91.0
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 2.8e-167 592.0 334 90.4
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 2.8e-167 592.0 334 90.4
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 4.7e-159 564.7 334 86.2
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 5.4e-155 551.2 320 86.6
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 7.8e-154 547.4 333 83.2
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 1.7e-153 546.2 336 83.0
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 3.0e-153 545.4 336 83.3
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 1.9e-152 542.7 318 85.2
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 2.5e-152 542.3 318 85.2
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 2.5e-152 542.3 338 82.2
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 3.3e-152 542.0 330 83.0
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 4.3e-152 541.6 354 79.1
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 4.3e-152 541.6 336 82.7
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 9.5e-152 540.4 338 82.0
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 1.2e-151 540.0 338 82.8
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 1.2e-151 540.0 336 82.7
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 2.8e-151 538.9 338 82.5
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 2.8e-151 538.9 333 80.8
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 3.6e-151 538.5 336 82.1
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 6.2e-151 537.7 332 83.1
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 6.2e-151 537.7 336 82.1
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 1.1e-150 537.0 336 82.7
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 1.1e-150 537.0 337 80.7
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 2.3e-150 535.8 336 81.5
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 3.1e-150 535.4 336 82.1
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 3.1e-150 535.4 320 83.1
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 4.0e-150 535.0 337 81.0
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 5.2e-150 534.6 337 80.7
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 5.2e-150 534.6 338 80.8
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 5.2e-150 534.6 320 83.1
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 5.2e-150 534.6 310 85.2
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 1.2e-149 533.5 320 82.8
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 2.6e-149 532.3 336 80.7
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 5.8e-149 531.2 340 80.3
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 5.8e-149 531.2 340 80.3
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 5.8e-149 531.2 305 86.2
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 5.8e-149 531.2 335 81.2
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 7.5e-149 530.8 336 81.0
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 7.5e-149 530.8 336 81.0
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 9.8e-149 530.4 328 82.3
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 1.3e-148 530.0 337 80.1
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 1.7e-148 529.6 339 79.6
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 2.2e-148 529.3 336 80.4
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 2.2e-148 529.3 335 82.1
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 2.9e-148 528.9 316 82.6
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 6.4e-148 527.7 353 77.1
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 6.4e-148 527.7 336 81.5
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 8.3e-148 527.3 336 80.4
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 1.4e-147 526.6 337 79.8
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 1.9e-147 526.2 335 80.0
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 1.9e-147 526.2 332 81.0
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 4.1e-147 525.0 302 86.4
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 5.4e-147 524.6 327 81.0
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 7.1e-147 524.2 336 79.8
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 1.2e-146 523.5 333 80.8
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 1.6e-146 523.1 320 82.5
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 1.6e-146 523.1 316 83.2
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 2.7e-146 522.3 337 79.5
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 6.0e-146 521.2 336 79.2
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 6.0e-146 521.2 320 82.2
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 7.8e-146 520.8 331 79.2
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 1.7e-145 519.6 336 77.4
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 1.7e-145 519.6 320 81.9
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 2.3e-145 519.2 320 82.2
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 3.0e-145 518.8 313 83.4
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 3.0e-145 518.8 336 77.4
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 3.0e-145 518.8 336 78.6
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 5.1e-145 518.1 336 78.0
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 6.6e-145 517.7 316 81.6
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 8.6e-145 517.3 336 76.5
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 8.6e-145 517.3 325 80.6
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 1.1e-144 516.9 334 77.8
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 1.9e-144 516.2 316 80.7
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 4.3e-144 515.0 336 76.8
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 5.6e-144 514.6 336 76.2
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 7.3e-144 514.2 336 76.5
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 2.1e-143 512.7 328 79.0
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 2.1e-143 512.7 328 79.0
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 3.6e-143 511.9 336 76.5
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 1.8e-142 509.6 336 75.6
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 1.8e-142 509.6 336 75.6
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 3.1e-142 508.8 336 78.3
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 4.0e-142 508.4 316 79.7
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 4.0e-142 508.4 336 78.3
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 5.2e-142 508.1 283 90.5
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 6.8e-142 507.7 334 76.3
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 6.8e-142 507.7 331 77.3
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.5e-141 506.5 332 78.0
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 2.0e-141 506.1 336 75.3
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 2.0e-141 506.1 296 84.8
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 2.0e-141 506.1 336 75.9
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 2.0e-141 506.1 336 75.9
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 5.8e-141 504.6 334 79.9
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 7.6e-141 504.2 302 83.4
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 2.2e-140 502.7 336 74.4
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 4.9e-140 501.5 336 74.1
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 8.4e-140 500.7 335 75.8
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 1.9e-139 499.6 336 74.4
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 1.9e-139 499.6 336 74.4
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 1.9e-139 499.6 336 74.4
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 2.4e-139 499.2 336 75.0
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 2.7e-138 495.7 326 74.5
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 1.3e-137 493.4 333 75.4
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 2.3e-137 492.7 384 68.8
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 5.1e-137 491.5 333 75.1
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 2.5e-136 489.2 393 67.2
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 9.9e-133 477.2 403 65.3
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 1.1e-131 473.8 283 83.0
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 1.6e-130 469.9 286 82.2
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 2.5e-128 462.6 331 69.8
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 5.3e-126 454.9 330 71.2
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 4.2e-123 445.3 388 61.9
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 2.5e-120 436.0 330 67.3
Nitab4.5_0009429g0030 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.4e-118 430.3 285 77.2
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 2.0e-117 426.4 330 68.2
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 2.2e-116 422.9 354 64.7
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 3.1e-110 402.5 318 62.9
CDE07G0688 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 7.6e-109 397.9 243 81.5
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 1.2e-106 390.6 237 82.3
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 2.3e-105 386.3 321 61.1
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 6.7e-105 384.8 336 59.8
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 3.2e-99 365.9 229 79.5
CBR_g20988 Chara braunii HOM05D004329 ORTHO05D005516 2.9e-92 342.8 309 57.0
MBI13_g43178_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 5.7e-88 328.6 215 77.7
HPP92_028710 Vanilla planifolia HOM05D004329 ORTHO05D005516 6.1e-82 308.5 208 73.6
Cc09_g07950 Coffea canephora HOM05D004329 ORTHO05D005516 2.0e-77 293.5 175 82.3
SMO356G0738 Selaginella moellendorffii HOM05D004329 ORTHO05D005516 7.7e-77 291.6 305 49.8
MBI13_g13130_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 7.2e-67 258.5 176 76.1
Os08g0323000 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D005516 8.5e-60 235.0 171 69.0
BcaC03g18112 Brassica carinata HOM05D004329 ORTHO05D005516 1.0e-57 228.0 156 73.1
MCO15G338 Micromonas commoda HOM05D004329 ORTHO05D005516 1.0e-57 228.0 324 41.4
Cc09_g07980 Coffea canephora HOM05D004329 ORTHO05D005516 6.8e-57 225.3 137 80.3
Cc09_g07990 Coffea canephora HOM05D004329 ORTHO05D005516 6.8e-57 225.3 151 76.8
Cre06.g267100 Chlamydomonas reinhardtii HOM05D004329 ORTHO05D005516 1.7e-55 220.7 341 38.1
FAN18G2676 Fragaria x ananassa HOM05D004329 ORTHO05D005516 5.2e-49 199.1 339 41.9
CSS0034501 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 7.3e-43 178.7 108 83.3
CSS0009974 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 3.6e-42 176.4 113 79.6
Aqoxy5G01090 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 2.3e-41 173.7 181 56.4
A02p41850 Brassica napus HOM05D004329 ORTHO05D005516 4.0e-33 146.4 101 74.3
Solyc02g062830.2 Solanum lycopersicum HOM05D004329 ORTHO05D005516 9.8e-32 141.7 96 70.8
Cc00_g30130 Coffea canephora HOM05D004329 ORTHO05D005516 1.9e-30 137.5 80 82.5
AagrBONN_evm.TU.Sc2ySwM_228.1281 Anthoceros agrestis HOM05D004329 ORTHO05D005516 2.4e-30 137.1 126 54.8
CDE07G1247 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 8.6e-28 128.6 78 76.9
PRCOL_00003443 Prasinoderma coloniale HOM05D004329 ORTHO05D005516 1.1e-27 128.3 329 30.4
Solyc02g062840.1 Solanum lycopersicum HOM05D004329 ORTHO05D005516 7.8e-21 105.5 66 74.2
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 1.1e-19 101.7 78 62.8
Zm00001eb202340 Zea mays HOM05D004329 ORTHO05D005516 2.4e-14 84.0 71 56.3
Lsat_1_v5_gn_5_81961 Lactuca sativa HOM05D004329 ORTHO05D005516 4.6e-13 79.7 55 74.5
Lsat_1_v5_gn_8_114301 Lactuca sativa HOM05D004329 ORTHO05D005516 2.3e-12 77.4 54 74.1
Hund31053 Selenicereus undatus HOM05D004329 ORTHO05D026010 8.7e-12 75.5 52 76.9
Hund31064 Selenicereus undatus HOM05D004329 ORTHO05D026010 2.5e-11 73.9 52 75.0
TAR622G0210 Trochodendron aralioides HOM05D004329 ORTHO05D005516 2.5e-11 73.9 45 75.6
Nitab4.5_0017885g0010 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.3e-10 71.6 43 74.4
Cfa027290 Carpinus fangiana HOM05D004329 ORTHO05D121551 4.8e-10 69.7 328 23.5
Sopen02g013860 Solanum pennellii HOM05D004329 ORTHO05D026010 1.7e-07 61.2 61 55.7
Os08g0323266 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D026010 3.8e-07 60.1 53 56.6
COL.COLO4_03746 Corchorus olitorius HOM05D004329 ORTHO05D155270 1.1e-06 58.5 29 89.7


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