Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g209700 Amaranthus hybridus HOM05D006212 ORTHO05D008245 0.0e+00 1230.3 596 100.0
AUR62006360 Chenopodium quinoa HOM05D006212 ORTHO05D008245 6.3e-263 910.6 884 55.8
Hund19796 Selenicereus undatus HOM05D006212 ORTHO05D008245 2.2e-255 885.6 883 53.1
AUR62029688 Chenopodium quinoa HOM05D006212 ORTHO05D008245 1.1e-251 873.2 976 50.3
GSVIVG01016183001 Vitis vinifera HOM05D006212 ORTHO05D008245 4.4e-224 781.6 883 47.3
Haze_16761 Corylus avellana HOM05D006212 ORTHO05D008245 7.5e-224 780.8 908 46.4
Cfa001784 Carpinus fangiana HOM05D006212 ORTHO05D008245 1.1e-222 776.9 885 46.9
QL08p053276 Quercus lobata HOM05D006212 ORTHO05D008245 3.2e-222 775.4 885 46.9
Nitab4.5_0007723g0030 Nicotiana tabacum HOM05D006212 ORTHO05D008245 3.6e-218 761.9 838 47.7
Prupe.2G205800 Prunus persica HOM05D006212 ORTHO05D008245 4.7e-218 761.5 882 46.4
TAR369G0250 Trochodendron aralioides HOM05D006212 ORTHO05D008245 7.5e-216 754.2 880 46.2
CiPaw.01G266400 Carya illinoinensis HOM05D006212 ORTHO05D008245 2.9e-215 752.3 883 46.3
Thecc.10G087900 Theobroma cacao HOM05D006212 ORTHO05D008245 3.7e-215 751.9 885 45.6
Gorai.009G305300 Gossypium raimondii HOM05D006212 ORTHO05D008245 1.4e-214 750.0 882 45.6
RcHm_v2.0_Chr1g0362181 Rosa chinensis HOM05D006212 ORTHO05D008245 1.6e-213 746.5 883 46.2
FvH4_7g18370 Fragaria vesca HOM05D006212 ORTHO05D008245 2.1e-213 746.1 885 45.6
MD01G1100100 Malus domestica HOM05D006212 ORTHO05D008245 3.5e-213 745.3 884 45.8
CAN.G459.26 Capsicum annuum HOM05D006212 ORTHO05D008245 1.7e-212 743.0 885 45.3
FAN06G2367 Fragaria x ananassa HOM05D006212 ORTHO05D008245 6.6e-212 741.1 887 45.4
Nn6g35226 Nelumbo nucifera HOM05D006212 ORTHO05D008245 3.3e-211 738.8 883 45.4
Potri.010G229300 Populus trichocarpa HOM05D006212 ORTHO05D008245 5.6e-211 738.0 883 44.3
FAN03G1155 Fragaria x ananassa HOM05D006212 ORTHO05D008245 6.2e-210 734.6 887 45.2
TWI38G1180 Tripterygium wilfordii HOM05D006212 ORTHO05D008245 3.1e-209 732.3 885 45.3
ClCG05G021340 Citrullus lanatus HOM05D006212 ORTHO05D008245 6.8e-209 731.1 885 44.5
HanXRQChr14g0455751 Helianthus annuus HOM05D006212 ORTHO05D008245 1.5e-208 729.9 886 45.4
CsaV3_5G035900 Cucumis sativus L. HOM05D006212 ORTHO05D008245 2.6e-208 729.2 885 44.1
Oeu016301.1 Olea europaea HOM05D006212 ORTHO05D008245 7.6e-208 727.6 886 44.8
Sopen11g003910 Solanum pennellii HOM05D006212 ORTHO05D008245 1.7e-207 726.5 882 44.7
FAN01G0990 Fragaria x ananassa HOM05D006212 ORTHO05D008245 2.9e-207 725.7 887 45.1
PSO339G2669 Papaver somniferum HOM05D006212 ORTHO05D008245 1.9e-206 723.0 882 43.8
Glyma.10G197000 Glycine max HOM05D006212 ORTHO05D008245 5.4e-206 721.5 886 44.4
Cc02_g10690 Coffea canephora HOM05D006212 ORTHO05D008245 1.2e-205 720.3 882 44.8
Lsat_1_v5_gn_2_103740 Lactuca sativa HOM05D006212 ORTHO05D008245 1.2e-205 720.3 883 44.5
Phvul.007G139400 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 1.2e-205 720.3 886 44.4
VMungo0720G1989 Vigna mungo HOM05D006212 ORTHO05D008245 1.2e-205 720.3 898 43.9
Lalb_Chr21g0312911 Lupinus albus HOM05D006212 ORTHO05D008245 1.6e-205 719.9 887 44.8
Ca_10444_v3 Cicer arietinum L. HOM05D006212 ORTHO05D008245 2.1e-205 719.5 869 45.0
TPR.G37858 Trifolium pratense HOM05D006212 ORTHO05D008245 3.5e-205 718.8 879 44.5
FAN06G0602 Fragaria x ananassa HOM05D006212 ORTHO05D008245 3.0e-204 715.7 887 44.5
Duzib114G0641 Durio zibethinus HOM05D006212 ORTHO05D008245 3.3e-203 712.2 854 45.4
ECA238G3613 Erigeron canadensis HOM05D006212 ORTHO05D008245 5.6e-203 711.4 883 43.8
FAN10G1668 Fragaria x ananassa HOM05D006212 ORTHO05D008245 5.6e-203 711.4 857 45.2
EL10Ac7g17062 Beta vulgaris HOM05D006212 ORTHO05D008245 7.3e-203 711.1 947 45.0
COL.COLO4_09860 Corchorus olitorius HOM05D006212 ORTHO05D008245 3.6e-202 708.8 989 40.7
arahy.Tifrunner.gnm1.ann1.MYE0E1 Arachis hypogaea HOM05D006212 ORTHO05D008245 3.1e-201 705.7 881 43.8
arahy.Tifrunner.gnm1.ann1.KY2C4A Arachis hypogaea HOM05D006212 ORTHO05D008245 1.5e-200 703.4 881 43.5
Rhsim09G0146100 Rhododendron simsii HOM05D006212 ORTHO05D008245 1.5e-200 703.4 934 42.4
Medtr1g090693 Medicago truncatula HOM05D006212 ORTHO05D008245 2.0e-200 703.0 880 43.9
DCAR_019069 Daucus carota HOM05D006212 ORTHO05D008245 9.9e-200 700.7 882 44.1
Nitab4.5_0004987g0060 Nicotiana tabacum HOM05D006212 ORTHO05D008245 1.3e-199 700.3 792 47.7
Sabra10G0177800 Salix brachista HOM05D006212 ORTHO05D008245 3.8e-199 698.7 963 40.7
MSTRG.27497 Avicennia marina HOM05D006212 ORTHO05D008245 4.9e-199 698.4 877 43.7
vmacro10255 Vaccinium macrocarpon HOM05D006212 ORTHO05D008245 5.4e-198 694.9 935 42.2
Dinv31247 Davidia involucrata HOM05D006212 ORTHO05D008245 2.1e-197 693.0 816 45.8
Sed0020526 Sechium edule HOM05D006212 ORTHO05D008245 7.8e-197 691.0 847 43.6
Thhalv10012585m.g Eutrema salsugineum HOM05D006212 ORTHO05D008245 1.0e-196 690.6 882 42.7
CARHR208930 Cardamine hirsuta HOM05D006212 ORTHO05D008245 1.3e-196 690.3 882 42.9
AT5G04360 Arabidopsis thaliana HOM05D006212 ORTHO05D008245 3.0e-196 689.1 882 42.7
MELO3C034031.2 Cucumis melo HOM05D006212 ORTHO05D008245 3.0e-196 689.1 949 41.0
ATR0329G025 Amborella trichopoda HOM05D006212 ORTHO05D008245 3.9e-196 688.7 882 43.2
Migut.F01920 Erythranthe guttata HOM05D006212 ORTHO05D008245 4.3e-195 685.3 862 43.9
AL6G14000 Arabidopsis lyrata HOM05D006212 ORTHO05D008245 7.3e-195 684.5 882 42.5
SalBow4G3289 Salvia bowleyana HOM05D006212 ORTHO05D008245 1.1e-193 680.6 910 43.1
THA.LOC104816441 Tarenaya hassleriana HOM05D006212 ORTHO05D008245 1.4e-193 680.2 888 42.1
Sp6g38370 Schrenkiella parvula HOM05D006212 ORTHO05D008245 3.1e-193 679.1 886 42.2
Carub.0006s0331 Capsella rubella HOM05D006212 ORTHO05D008245 2.6e-192 676.0 881 42.6
Aa31LG11G5260 Aethionema arabicum HOM05D006212 ORTHO05D008245 9.3e-190 667.5 901 41.5
Gohir.D05G290200 Gossypium hirsutum HOM05D006212 ORTHO05D008245 1.2e-189 667.2 814 44.3
BcaC06g32141 Brassica carinata HOM05D006212 ORTHO05D008245 2.7e-181 639.4 856 41.6
Sc06g0002110 Simmondsia chinensis HOM05D006212 ORTHO05D008245 1.5e-179 633.6 767 45.5
FAN10G3474 Fragaria x ananassa HOM05D006212 ORTHO05D008245 8.2e-178 627.9 854 42.6
Manes.10G051700 Manihot esculenta HOM05D006212 ORTHO05D008245 3.4e-176 622.5 545 57.8
Lj5g0009189 Lotus japonicus HOM05D006212 ORTHO05D008245 4.5e-176 622.1 813 42.7
Atru.chr12.885 Acer truncatum HOM05D006212 ORTHO05D008245 4.6e-173 612.1 771 45.1
Gohir.A05G289000 Gossypium hirsutum HOM05D006212 ORTHO05D008245 7.9e-173 611.3 541 55.8
Aqoxy1G01105 Aquilegia oxysepala HOM05D006212 ORTHO05D008245 1.3e-172 610.5 486 60.5
Actinidia35775 Actinidia chinensis HOM05D006212 ORTHO05D008245 4.3e-171 605.5 857 41.9
Mapoly0043s0011 Marchantia polymorpha HOM05D006212 ORTHO05D008245 2.4e-169 599.7 882 38.2
Eucgr.G02746 Eucalyptus grandis HOM05D006212 ORTHO05D008245 9.0e-169 597.8 784 41.7
Psat6g175360 Pisum sativum HOM05D006212 ORTHO05D008245 1.1e-166 590.9 538 54.1
Pp3c13_17460 Physcomitrium patens HOM05D006212 ORTHO05D008245 2.1e-165 586.6 882 36.7
Ciclev10031035m.g Citrus clementina HOM05D006212 ORTHO05D008245 1.1e-163 580.9 386 68.7
Zm00001eb088740 Zea mays HOM05D006212 ORTHO05D008245 3.7e-162 575.9 798 41.2
SMO364G0199 Selaginella moellendorffii HOM05D006212 ORTHO05D008245 3.2e-158 562.8 882 36.8
Lj2C23T6 Lonicera japonica HOM05D006212 ORTHO05D008245 3.0e-156 556.2 599 50.6
Peaxi162Scf00982g00216 Petunia axillaris HOM05D006212 ORTHO05D008245 1.0e-143 514.6 559 48.8
AagrBONN_evm.TU.Sc2ySwM_368.1756 Anthoceros agrestis HOM05D006212 ORTHO05D008245 2.7e-141 506.5 540 46.3
C09p72430 Brassica napus HOM05D006212 ORTHO05D008245 2.9e-127 459.9 353 59.5
BolC9t59986H Brassica oleracea HOM05D006212 ORTHO05D008245 1.9e-126 457.2 353 59.8
CDE02G0888 Ceratophyllum demersum HOM05D006212 ORTHO05D008245 1.8e-124 450.7 385 55.6
A10p31730 Brassica napus HOM05D006212 ORTHO05D008245 1.7e-122 444.1 381 55.6
SEGI_29889 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 1.2e-109 401.4 317 58.0
Cpa.g.sc53.156 Carica papaya HOM05D006212 ORTHO05D008245 3.6e-109 399.8 289 64.0
Cre11.g476650 Chlamydomonas reinhardtii HOM05D006212 ORTHO05D008245 4.0e-84 316.6 565 35.0
Solyc11g008050.1 Solanum lycopersicum HOM05D006212 ORTHO05D008245 2.0e-83 314.3 328 49.7
Solyc11g008060.1 Solanum lycopersicum HOM05D006212 ORTHO05D008245 4.9e-74 283.1 216 59.7
Cpa.g.sc53.158 Carica papaya HOM05D006212 ORTHO05D008245 1.0e-71 275.4 559 33.1
PRCOL_00002423 Prasinoderma coloniale HOM05D006212 ORTHO05D008245 6.7e-71 272.7 569 32.2
Lj2A23T70 Lonicera japonica HOM05D006212 ORTHO05D008245 2.5e-57 227.6 151 68.9
Peaxi162Scf00982g00214 Petunia axillaris HOM05D006212 ORTHO05D008245 7.1e-57 226.1 150 68.0
Solyc11g008040.3 Solanum lycopersicum HOM05D006212 ORTHO05D008245 1.0e-55 222.2 150 69.3
SGA_v2.0_scaffold13G06519 Striga asiatica HOM05D006212 ORTHO05D008245 3.9e-55 220.3 362 37.0
Hma1.2p1_0117F.1_g056390 Hydrangea macrophylla HOM05D006212 ORTHO05D008245 1.4e-52 211.8 177 56.5
CSS0046021 Camellia sinensis var. sinensis HOM05D006212 ORTHO05D008245 2.4e-52 211.1 151 61.6
Psat6g172720 Pisum sativum HOM05D006212 ORTHO05D008245 5.0e-50 203.4 150 60.0
A05p23200 Brassica napus HOM05D006212 ORTHO05D008245 1.4e-47 195.3 148 60.8
BraA05t21187Z Brassica rapa HOM05D006212 ORTHO05D008245 1.4e-47 195.3 148 60.8
A10p31720 Brassica napus HOM05D006212 ORTHO05D008245 1.1e-46 192.2 148 60.1
BraA10t45218Z Brassica rapa HOM05D006212 ORTHO05D008245 1.1e-44 185.7 145 59.3
C09p72420 Brassica napus HOM05D006212 ORTHO05D008245 2.4e-44 184.5 148 58.1
Os04g0164900 Oryza sativa ssp. japonica HOM05D006212 ORTHO05D008245 6.9e-44 183.0 381 30.7
SEGI_14076 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 1.2e-43 182.2 176 53.4
MD07G1166900 Malus domestica HOM05D006212 ORTHO05D008245 3.8e-26 124.0 136 48.5
SEGI_30136 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 1.1e-20 105.9 60 76.7
Actinidia15140 Actinidia chinensis HOM05D006212 ORTHO05D030889 4.2e-17 94.0 62 69.4
CSS0004413 Camellia sinensis var. sinensis HOM05D006212 ORTHO05D008245 1.8e-15 88.6 64 65.6
Ah.02g119250 Amaranthus hybridus HOM05D000462 ORTHO05D013926 4.0e-15 87.4 54 77.8
Actinidia18721 Actinidia chinensis HOM05D002639 ORTHO05D003094 7.7e-11 73.2 76 50.0
Lsat_1_v5_gn_5_31800 Lactuca sativa HOM05D006212 ORTHO05D008245 1.0e-10 72.8 66 54.5
Actinidia13523 Actinidia chinensis HOM05D006212 ORTHO05D030889 5.6e-09 67.0 54 57.4
TAR371G0758 Trochodendron aralioides HOM05D006212 ORTHO05D030889 2.1e-08 65.1 65 50.8
Phvul.005G014100 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 2.0e-06 58.5 32 71.9


User provided reference genes

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