Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g115400 Amaranthus hybridus HOM05D002705 ORTHO05D004955 0.0e+00 2036.5 1054 100.0
EL10As1g23078 Beta vulgaris HOM05D002705 ORTHO05D004955 0.0e+00 1352.8 1144 65.6
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 0.0e+00 1138.3 1023 59.9
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 0.0e+00 1137.1 1121 55.1
Actinidia13623 Actinidia chinensis HOM05D002705 ORTHO05D004955 0.0e+00 1131.7 1038 58.8
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 0.0e+00 1129.8 1203 53.4
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 0.0e+00 1128.2 1029 58.8
Nn1g00769 Nelumbo nucifera HOM05D002705 ORTHO05D004955 0.0e+00 1126.7 1040 59.1
CiPaw.07G183200 Carya illinoinensis HOM05D002705 ORTHO05D004955 0.0e+00 1126.3 1005 58.9
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 0.0e+00 1125.9 1034 59.3
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 0.0e+00 1117.8 1037 58.9
Aqoxy7G00864 Aquilegia oxysepala HOM05D002705 ORTHO05D004955 0.0e+00 1117.8 1029 58.8
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 0.0e+00 1117.4 1037 58.8
GSVIVG01013853001 Vitis vinifera HOM05D002705 ORTHO05D004955 0.0e+00 1115.9 956 60.9
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 0.0e+00 1110.5 1037 58.1
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 0.0e+00 1108.6 1059 58.1
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 0.0e+00 1103.6 1010 58.3
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 0.0e+00 1101.7 1037 58.0
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 0.0e+00 1095.9 1030 58.0
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 0.0e+00 1094.3 1072 56.2
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 0.0e+00 1094.3 1128 55.0
Lalb_Chr06g0169611 Lupinus albus HOM05D002705 ORTHO05D004955 0.0e+00 1094.0 1027 57.5
Glyma.20G198400 Glycine max HOM05D002705 ORTHO05D004955 0.0e+00 1092.4 1017 57.4
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 0.0e+00 1090.9 1120 55.0
Thecc.03G145700 Theobroma cacao HOM05D002705 ORTHO05D004955 0.0e+00 1090.1 1005 59.5
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 0.0e+00 1086.2 914 63.1
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 0.0e+00 1084.7 1037 58.1
THA.LOC104825051 Tarenaya hassleriana HOM05D002705 ORTHO05D004955 0.0e+00 1081.2 1050 56.0
Gohir.A09G248500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 0.0e+00 1079.7 1039 57.5
Lj8C49G2 Lonicera japonica HOM05D002705 ORTHO05D004955 0.0e+00 1077.4 1096 54.4
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 0.0e+00 1076.2 1027 56.8
Eucgr.K00116 Eucalyptus grandis HOM05D002705 ORTHO05D004955 7.2e-312 1074.3 911 61.1
TPR.G18561 Trifolium pratense HOM05D002705 ORTHO05D004955 2.9e-311 1072.0 1019 56.2
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 5.0e-311 1071.2 1013 56.9
Medtr1g072800 Medicago truncatula HOM05D002705 ORTHO05D004955 5.0e-311 1071.2 1011 56.6
AL7G28030 Arabidopsis lyrata HOM05D002705 ORTHO05D004955 6.5e-311 1070.8 1037 56.9
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 6.5e-311 1070.8 1013 57.2
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 1.1e-310 1070.1 1075 55.0
Carub.0007s1591 Capsella rubella HOM05D002705 ORTHO05D004955 3.2e-310 1068.5 1031 57.0
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 5.5e-310 1067.8 1039 56.9
Lj5g0005183 Lotus japonicus HOM05D002705 ORTHO05D004955 7.1e-310 1067.4 1012 57.1
PGR142G4199 Punica granatum HOM05D002705 ORTHO05D004955 2.1e-309 1065.8 1011 56.5
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 4.6e-309 1064.7 1131 52.3
DCAR_014643 Daucus carota HOM05D002705 ORTHO05D004955 6.0e-309 1064.3 1011 57.4
Psat6g140240 Pisum sativum HOM05D002705 ORTHO05D004955 7.9e-309 1063.9 1025 56.2
HanXRQChr15g0493601 Helianthus annuus HOM05D002705 ORTHO05D004955 2.3e-308 1062.4 1007 58.3
AT4G25120 Arabidopsis thaliana HOM05D002705 ORTHO05D004955 3.0e-308 1062.0 1038 56.7
ECA232G4016 Erigeron canadensis HOM05D002705 ORTHO05D004955 6.7e-308 1060.8 1036 56.9
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 6.7e-308 1060.8 1031 57.2
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 1.5e-304 1049.7 1024 55.3
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.0e-304 1049.3 1036 56.5
BcaC06g32837 Brassica carinata HOM05D002705 ORTHO05D004955 2.6e-304 1048.9 1156 52.1
Thhalv10024258m.g Eutrema salsugineum HOM05D002705 ORTHO05D004955 2.6e-304 1048.9 1111 52.9
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 5.8e-304 1047.7 1038 56.6
Aa31LG7G10510 Aethionema arabicum HOM05D002705 ORTHO05D004955 6.5e-303 1044.3 1114 53.4
AUR62042388 Chenopodium quinoa HOM05D002705 ORTHO05D004955 1.9e-302 1042.7 1058 56.9
COL.COLO4_37311 Corchorus olitorius HOM05D002705 ORTHO05D004955 4.2e-302 1041.6 1028 56.4
Manes.14G040900 Manihot esculenta HOM05D002705 ORTHO05D004955 4.2e-302 1041.6 872 62.6
Rhsim03G0158700 Rhododendron simsii HOM05D002705 ORTHO05D004955 2.3e-300 1035.8 1008 56.3
Sp7g23120 Schrenkiella parvula HOM05D002705 ORTHO05D004955 3.9e-300 1035.0 938 58.4
SalBow2G1886 Salvia bowleyana HOM05D002705 ORTHO05D004955 6.7e-300 1034.2 1080 54.3
Os07g0492100 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D004955 1.4e-294 1016.5 930 58.8
ATR0665G329 Amborella trichopoda HOM05D002705 ORTHO05D004955 3.0e-292 1008.8 1053 54.0
vmacro06848 Vaccinium macrocarpon HOM05D002705 ORTHO05D004955 3.3e-291 1005.4 1071 52.9
Phvul.L001885 Phaseolus vulgaris HOM05D002705 ORTHO05D004955 4.3e-291 1005.0 959 56.4
Lsat_1_v5_gn_0_9880 Lactuca sativa HOM05D002705 ORTHO05D004955 4.8e-290 1001.5 1029 55.0
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 2.0e-288 996.1 1054 54.0
A03p55770 Brassica napus HOM05D002705 ORTHO05D004955 3.2e-286 988.8 1084 51.8
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 4.6e-285 984.9 1033 55.0
BolC7t45891H Brassica oleracea HOM05D002705 ORTHO05D004955 3.9e-284 981.9 1076 51.5
C07p54050 Brassica napus HOM05D002705 ORTHO05D004955 3.3e-283 978.8 1074 51.5
BraA03t14645Z Brassica rapa HOM05D002705 ORTHO05D004955 1.3e-282 976.9 1091 50.9
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 4.1e-281 971.8 1031 54.0
Hma1.2p1_2119F.1_g314370 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 4.7e-277 958.4 820 62.1
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.8e-274 949.1 1107 50.9
MD07G1243100 Malus domestica HOM05D002705 ORTHO05D004955 5.0e-271 938.3 873 58.5
MSTRG.8400 Avicennia marina HOM05D002705 ORTHO05D004955 8.0e-269 931.0 801 61.2
Nitab4.5_0000103g0340 Nicotiana tabacum HOM05D002705 ORTHO05D004955 7.0e-265 917.9 806 60.5
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 2.7e-261 906.0 788 61.0
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 2.9e-255 885.9 835 58.4
HPP92_003517 Vanilla planifolia HOM05D002705 ORTHO05D004955 2.1e-253 879.8 882 54.8
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 2.2e-250 869.8 918 54.1
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 2.8e-250 869.4 995 51.4
MD07G1245700 Malus domestica HOM05D002705 ORTHO05D004955 3.7e-250 869.0 833 57.1
Mapoly0067s0049 Marchantia polymorpha HOM05D002705 ORTHO05D004955 1.2e-240 837.4 1016 48.0
Pp3c1_29170 Physcomitrium patens HOM05D002705 ORTHO05D004955 3.9e-239 832.4 953 49.3
AagrBONN_evm.TU.Sc2ySwM_117.709 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.5e-238 830.5 1010 48.1
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 2.1e-237 826.6 757 58.5
unitig_578.g16613 Utricularia gibba HOM05D002705 ORTHO05D004955 2.8e-237 826.2 978 49.2
SMO263G0015 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 2.3e-228 796.6 849 51.4
arahy.Tifrunner.gnm1.ann1.WYM0Y2 Arachis hypogaea HOM05D002705 ORTHO05D004955 6.4e-226 788.5 678 59.9
arahy.Tifrunner.gnm1.ann1.ZG0SUW Arachis hypogaea HOM05D002705 ORTHO05D004955 1.4e-225 787.3 676 59.9
SMO118G0423 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.8e-220 770.4 891 48.9
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 3.1e-212 743.0 728 57.3
Peaxi162Scf00073g01729 Petunia axillaris HOM05D002705 ORTHO05D004955 3.4e-203 713.0 593 63.2
MD07G1241600 Malus domestica HOM05D002705 ORTHO05D004955 1.3e-194 684.5 628 58.8
CARHR232510 Cardamine hirsuta HOM05D002705 ORTHO05D004955 1.3e-191 674.5 613 58.1
Sc11g0004220 Simmondsia chinensis HOM05D002705 ORTHO05D004955 1.8e-175 620.9 484 65.9
Ca_09785_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 2.3e-175 620.5 590 56.8
Hma1.2p1_2119F.1_g314360 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 8.2e-173 612.1 874 43.9
CSS0042603 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D004955 4.4e-158 563.1 586 53.8
Nn1g00770 Nelumbo nucifera HOM05D002705 ORTHO05D004955 3.1e-156 557.0 496 61.5
AagrBONN_evm.TU.Sc2ySwM_340.578 Anthoceros agrestis HOM05D002705 ORTHO05D004955 4.2e-145 520.0 715 43.9
CAN.G408.1 Capsicum annuum HOM05D002705 ORTHO05D004955 4.1e-140 503.4 414 63.0
HPP92_027816 Vanilla planifolia HOM05D002705 ORTHO05D004955 2.4e-124 451.1 718 40.0
CAN.G1654.1 Capsicum annuum HOM05D002705 ORTHO05D004955 1.6e-115 421.8 420 55.0
CAN.G1406.2 Capsicum annuum HOM05D002705 ORTHO05D004955 8.6e-106 389.4 376 55.3
Manes.14G040200 Manihot esculenta HOM05D002705 ORTHO05D004955 8.6e-106 389.4 400 54.8
MD07G1241700 Malus domestica HOM05D002705 ORTHO05D004955 1.0e-90 339.3 391 51.4
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.7e-83 314.7 278 62.2
CBR_g55304 Chara braunii HOM05D002705 ORTHO05D004955 1.3e-74 285.8 374 43.3
SMO118G0116 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 6.7e-66 256.9 688 31.4
FAN01G1045 Fragaria x ananassa HOM05D002705 ORTHO05D004955 7.4e-57 226.9 253 52.2
Pp3s32_280 Physcomitrium patens HOM05D020685 ORTHO05D022318 8.2e-56 223.4 695 29.1
Cpa.g.sc13.234 Carica papaya HOM05D002705 ORTHO05D004955 1.7e-53 215.7 197 57.4
Ca_09786_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 1.2e-51 209.5 144 68.8
Solyc03g093840.3 Solanum lycopersicum HOM05D002705 ORTHO05D004955 7.9e-51 206.8 161 62.7
FAN17G2187 Fragaria x ananassa HOM05D002705 ORTHO05D004955 5.7e-49 200.7 179 62.0
CAN.G1559.4 Capsicum annuum HOM05D002705 ORTHO05D004955 2.2e-48 198.7 276 43.5
CAN.G1406.1 Capsicum annuum HOM05D002705 ORTHO05D004955 7.0e-47 193.7 230 47.0
CAN.G1654.2 Capsicum annuum HOM05D002705 ORTHO05D004955 9.4e-44 183.3 164 56.7
Hma1.2p1_2119F.1_g314380 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 1.6e-43 182.6 165 58.2
Cfa026800 Carpinus fangiana HOM05D002705 ORTHO05D004955 2.7e-43 181.8 727 26.7
MD07G1245200 Malus domestica HOM05D002705 ORTHO05D004955 8.0e-43 180.3 165 58.2
Mapoly0020s0153 Marchantia polymorpha HOM05D002705 ORTHO05D004955 8.0e-43 180.3 678 27.3
MCO05G634 Micromonas commoda HOM05D002705 ORTHO05D004955 1.8e-42 179.1 706 28.5
Sc11g0004230 Simmondsia chinensis HOM05D002705 ORTHO05D004955 1.5e-41 176.0 134 61.2
SEGI_07874 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 9.7e-41 173.3 257 40.9
SEGI_05624 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.7e-40 172.6 147 57.8
SMO118G0216 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 4.1e-39 167.9 247 43.3
CDE06G1177 Ceratophyllum demersum HOM05D002705 ORTHO05D004955 7.0e-39 167.2 151 54.3
Pp3s70_120 Physcomitrium patens HOM05D002705 ORTHO05D004955 9.1e-39 166.8 659 27.3
AagrBONN_evm.TU.Sc2ySwM_368.2221 Anthoceros agrestis HOM05D002705 ORTHO05D004955 3.5e-38 164.9 734 26.3
Peaxi162Scf00073g01719 Petunia axillaris HOM05D002705 ORTHO05D004955 1.0e-37 163.3 115 70.4
CBR_g46888 Chara braunii HOM05D002705 ORTHO05D004955 1.3e-37 162.9 125 65.6
Peaxi162Scf00073g01730 Petunia axillaris HOM05D002705 ORTHO05D004955 2.7e-35 155.2 247 42.5
SEGI_26843 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 3.6e-35 154.8 112 65.2
SHI35079 Sapria himalayana HOM05D002705 ORTHO05D000001 1.4e-34 152.9 170 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2714 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.1e-31 143.3 384 30.5
SMO222G0004 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.0e-29 136.7 154 47.4
SEGI_07071 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.6e-27 129.4 100 61.0
ATR0789G167 Amborella trichopoda HOM05D002705 ORTHO05D004955 2.1e-27 129.0 488 27.0
Hund10671 Selenicereus undatus HOM05D002705 ORTHO05D004955 2.7e-27 128.6 83 74.7
PRCOL_00004767 Prasinoderma coloniale HOM05D002705 ORTHO05D004955 5.2e-26 124.4 779 24.3
SMO119G0107 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.3e-24 119.8 728 25.4
VMungo0720G0654 Vigna mungo HOM05D002705 ORTHO05D004955 2.2e-24 119.0 114 56.1
CBR_g55305 Chara braunii HOM05D002705 ORTHO05D004955 3.5e-22 111.7 105 52.4
Medtr0675s0010 Medicago truncatula HOM05D002705 ORTHO05D004955 1.6e-19 102.8 653 25.3
MD07G1244200 Malus domestica HOM05D002705 ORTHO05D004955 2.8e-19 102.1 131 45.0
SEGI_13522 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.8e-18 99.4 375 26.7
CBR_g22322 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-16 93.2 365 26.0
Lsat_1_v5_gn_5_183700 Lactuca sativa HOM05D002705 ORTHO05D021366 2.8e-16 92.0 170 43.5
MD07G1244100 Malus domestica HOM05D002705 ORTHO05D004955 1.6e-14 86.3 73 58.9
Cre07.g343333 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 6.6e-13 80.9 284 27.1
Cre07.g312250 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 4.7e-11 74.7 101 46.5
CDE06G2589 Ceratophyllum demersum HOM05D002705 ORTHO05D004955 1.0e-10 73.6 149 36.2
Cre07.g314400 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 1.2e-09 70.1 432 24.8
SMO119G0278 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 4.9e-08 64.7 138 33.3
CBR_g26524 Chara braunii HOM05D002705 ORTHO05D004955 4.6e-06 58.2 95 38.9
Pp3s70_20 Physcomitrium patens HOM05D002705 ORTHO05D313936 4.6e-06 58.2 367 23.7


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