Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia23963 Actinidia chinensis HOM05D004447 ORTHO05D058151 1.1e-84 318.9 171 100.0
Actinidia06336 Actinidia chinensis HOM05D004447 ORTHO05D005973 2.1e-24 118.6 71 78.9
Rhsim01G0191400 Rhododendron simsii HOM05D004447 ORTHO05D005973 3.6e-24 117.9 78 70.5
CSS0013975 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 4.8e-24 117.5 78 70.5
Dinv22185 Davidia involucrata HOM05D004447 ORTHO05D005973 8.1e-24 116.7 78 71.8
TAR636G0773 Trochodendron aralioides HOM05D004447 ORTHO05D005973 3.1e-23 114.8 78 67.9
Haze_23126 Corylus avellana HOM05D004447 ORTHO05D005973 4.0e-23 114.4 78 69.2
Gohir.A08G013660 Gossypium hirsutum HOM05D004447 ORTHO05D005973 4.0e-23 114.4 78 69.2
Gohir.D08G024200 Gossypium hirsutum HOM05D004447 ORTHO05D005973 4.0e-23 114.4 78 69.2
Thecc.09G232100 Theobroma cacao HOM05D004447 ORTHO05D005973 5.3e-23 114.0 78 67.9
Cfa009762 Carpinus fangiana HOM05D004447 ORTHO05D005973 6.9e-23 113.6 78 67.9
GSVIVG01025279001 Vitis vinifera HOM05D004447 ORTHO05D005973 9.0e-23 113.2 71 73.2
Duzib170G0888 Durio zibethinus HOM05D004447 ORTHO05D005973 1.2e-22 112.8 78 69.2
CiPaw.13G161800 Carya illinoinensis HOM05D004447 ORTHO05D005973 2.0e-22 112.1 78 66.7
Hund07518 Selenicereus undatus HOM05D004447 ORTHO05D005973 2.0e-22 112.1 78 67.9
COL.COLO4_24889 Corchorus olitorius HOM05D004447 ORTHO05D005973 2.6e-22 111.7 78 66.7
Gorai.004G019600 Gossypium raimondii HOM05D004447 ORTHO05D005973 2.6e-22 111.7 78 67.9
Aqoxy5G02409 Aquilegia oxysepala HOM05D004447 ORTHO05D005973 3.4e-22 111.3 78 69.2
Nn8g41218 Nelumbo nucifera HOM05D004447 ORTHO05D005973 3.4e-22 111.3 78 64.1
QL01p004967 Quercus lobata HOM05D004447 ORTHO05D005973 3.4e-22 111.3 71 71.8
TWI32G0348 Tripterygium wilfordii HOM05D004447 ORTHO05D005973 3.4e-22 111.3 78 64.1
Nitab4.5_0005731g0030 Nicotiana tabacum HOM05D004447 ORTHO05D005973 4.5e-22 110.9 71 70.4
Prupe.4G246200 Prunus persica HOM05D004447 ORTHO05D005973 4.5e-22 110.9 78 66.7
MD03G1176600 Malus domestica HOM05D004447 ORTHO05D005973 5.8e-22 110.5 78 67.9
CAN.G289.50 Capsicum annuum HOM05D004447 ORTHO05D005973 9.9e-22 109.8 71 70.4
Manes.14G002000 Manihot esculenta HOM05D004447 ORTHO05D005973 9.9e-22 109.8 71 73.2
DCAR_031545 Daucus carota HOM05D004447 ORTHO05D005973 1.3e-21 109.4 71 70.4
Atru.chr3.2739 Acer truncatum HOM05D004447 ORTHO05D005973 2.2e-21 108.6 71 70.4
Cc02_g33870 Coffea canephora HOM05D004447 ORTHO05D005973 2.2e-21 108.6 71 70.4
PGR119G1865 Punica granatum HOM05D004447 ORTHO05D005973 2.2e-21 108.6 78 65.4
Eucgr.J00777 Eucalyptus grandis HOM05D004447 ORTHO05D005973 4.9e-21 107.5 78 64.1
PGSC0003DMG402012812 Solanum tuberosum HOM05D004447 ORTHO05D005973 4.9e-21 107.5 71 69.0
Solyc03g006420.4 Solanum lycopersicum HOM05D004447 ORTHO05D005973 8.4e-21 106.7 71 70.4
Sopen03g002430 Solanum pennellii HOM05D004447 ORTHO05D005973 8.4e-21 106.7 71 70.4
THA.LOC104799099 Tarenaya hassleriana HOM05D004447 ORTHO05D005973 8.4e-21 106.7 71 69.0
Ah.01g003390 Amaranthus hybridus HOM05D004447 ORTHO05D005973 1.1e-20 106.3 71 69.0
EL10Ac4g10265 Beta vulgaris HOM05D004447 ORTHO05D005973 1.4e-20 105.9 71 67.6
EL10Ac4g10281 Beta vulgaris HOM05D004447 ORTHO05D005973 1.4e-20 105.9 71 67.6
Lj2C632T3 Lonicera japonica HOM05D004447 ORTHO05D005973 1.4e-20 105.9 71 70.4
Ciclev10014192m.g Citrus clementina HOM05D004447 ORTHO05D005973 1.9e-20 105.5 71 69.0
FAN01G0266 Fragaria x ananassa HOM05D004447 ORTHO05D005973 1.9e-20 105.5 78 66.7
Potri.009G054300 Populus trichocarpa HOM05D004447 ORTHO05D005973 1.9e-20 105.5 71 69.0
RcHm_v2.0_Chr3g0490671 Rosa chinensis HOM05D004447 ORTHO05D005973 1.9e-20 105.5 78 66.7
Sabra09G0039600 Salix brachista HOM05D004447 ORTHO05D005973 1.9e-20 105.5 71 69.0
Oeu043298.1 Olea europaea HOM05D004447 ORTHO05D005973 5.5e-20 104.0 78 62.8
Sed0019583 Sechium edule HOM05D004447 ORTHO05D005973 5.5e-20 104.0 78 62.8
Sc16g0011520 Simmondsia chinensis HOM05D004447 ORTHO05D005973 5.5e-20 104.0 78 64.1
SGA_v2.0_scaffold247G44874 Striga asiatica HOM05D004447 ORTHO05D005973 5.5e-20 104.0 77 61.0
Sp6g04850 Schrenkiella parvula HOM05D004447 ORTHO05D005973 7.1e-20 103.6 71 67.6
Cpa.g.sc84.65 Carica papaya HOM05D004447 ORTHO05D005973 9.3e-20 103.2 71 69.0
FvH4_7g17041 Fragaria vesca HOM05D004447 ORTHO05D005973 9.3e-20 103.2 78 65.4
FAN06G1152 Fragaria x ananassa HOM05D004447 ORTHO05D005973 9.3e-20 103.2 78 65.4
MBI01_g18890_MAGBIO Magnolia biondii HOM05D004447 ORTHO05D005973 9.3e-20 103.2 71 66.2
CsaV3_3G030760 Cucumis sativus L. HOM05D004447 ORTHO05D005973 1.2e-19 102.8 78 61.5
arahy.Tifrunner.gnm1.ann1.M4FG4U Arachis hypogaea HOM05D004447 ORTHO05D005973 1.6e-19 102.4 78 61.5
CANSAT54G1530 Cannabis sativa HOM05D004447 ORTHO05D005973 1.6e-19 102.4 78 62.8
AUR62000111 Chenopodium quinoa HOM05D004447 ORTHO05D005973 1.6e-19 102.4 71 67.6
AUR62019289 Chenopodium quinoa HOM05D004447 ORTHO05D005973 1.6e-19 102.4 71 67.6
Migut.D00596 Erythranthe guttata HOM05D004447 ORTHO05D005973 1.6e-19 102.4 78 60.3
Glyma.15G034300 Glycine max HOM05D004447 ORTHO05D005973 1.6e-19 102.4 78 60.3
Lsat_1_v5_gn_2_97601 Lactuca sativa HOM05D004447 ORTHO05D005973 1.6e-19 102.4 70 67.1
BcaC04g21255 Brassica carinata HOM05D004447 ORTHO05D005973 2.1e-19 102.1 70 68.6
A09p26680 Brassica napus HOM05D004447 ORTHO05D005973 2.1e-19 102.1 70 68.6
C09p33790 Brassica napus HOM05D004447 ORTHO05D005973 2.1e-19 102.1 70 68.6
BolC9t56215H Brassica oleracea HOM05D004447 ORTHO05D005973 2.1e-19 102.1 70 68.6
BraA09t38238Z Brassica rapa HOM05D004447 ORTHO05D005973 2.1e-19 102.1 70 68.6
Glyma.13G340100 Glycine max HOM05D004447 ORTHO05D005973 2.1e-19 102.1 78 59.0
Thhalv10029404m.g Eutrema salsugineum HOM05D004447 ORTHO05D005973 2.7e-19 101.7 71 67.6
VMungo1080G0814 Vigna mungo HOM05D004447 ORTHO05D005973 2.7e-19 101.7 78 60.3
Aa31LG9G10020 Aethionema arabicum HOM05D004447 ORTHO05D005973 4.6e-19 100.9 71 66.2
BcaB01g01767 Brassica carinata HOM05D004447 ORTHO05D005973 4.6e-19 100.9 70 67.1
HanXRQChr07g0197501 Helianthus annuus HOM05D004447 ORTHO05D005973 4.6e-19 100.9 70 67.1
TPR.G3376 Trifolium pratense HOM05D004447 ORTHO05D005973 6.0e-19 100.5 78 59.0
arahy.Tifrunner.gnm1.ann1.1VP9U3 Arachis hypogaea HOM05D004447 ORTHO05D005973 7.9e-19 100.1 78 60.3
CARHR253540 Cardamine hirsuta HOM05D004447 ORTHO05D005973 7.9e-19 100.1 71 63.4
Phvul.L009243 Phaseolus vulgaris HOM05D004447 ORTHO05D005973 7.9e-19 100.1 78 59.0
Medtr8g099640 Medicago truncatula HOM05D004447 ORTHO05D005973 1.0e-18 99.8 78 60.3
AL6G47620 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 1.3e-18 99.4 71 63.4
AT4G12620 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 1.3e-18 99.4 71 63.4
AT4G14700 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 1.8e-18 99.0 71 62.0
MSTRG.21381 Avicennia marina HOM05D004447 ORTHO05D005973 1.8e-18 99.0 77 57.1
Lalb_Chr24g0397081 Lupinus albus HOM05D004447 ORTHO05D005973 2.3e-18 98.6 78 59.0
Carub.0006s3195 Capsella rubella HOM05D004447 ORTHO05D005973 3.0e-18 98.2 72 62.5
Lj3g0019316 Lotus japonicus HOM05D004447 ORTHO05D005973 3.9e-18 97.8 78 59.0
MELO3C007066.2 Cucumis melo HOM05D004447 ORTHO05D005973 6.7e-18 97.1 78 59.0
PSO170G1822 Papaver somniferum HOM05D004447 ORTHO05D005973 6.7e-18 97.1 77 63.6
PSO302G0234 Papaver somniferum HOM05D004447 ORTHO05D005973 8.7e-18 96.7 70 68.6
unitig_0.g298 Utricularia gibba HOM05D004447 ORTHO05D005973 2.8e-16 91.7 71 59.2
vmacro12587 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 1.1e-15 89.7 43 88.4
Prupe.5G048200 Prunus persica HOM05D004447 ORTHO05D005973 1.2e-14 86.3 60 66.7
Nitab4.5_0000023g0270 Nicotiana tabacum HOM05D004447 ORTHO05D005973 2.0e-14 85.5 43 81.4
Psat7g024280 Pisum sativum HOM05D004447 ORTHO05D005973 2.6e-14 85.1 50 72.0
Actinidia23967 Actinidia chinensis HOM05D004447 ORTHO05D005973 4.5e-14 84.3 39 94.9
Ca_17467_v3 Cicer arietinum L. HOM05D004447 ORTHO05D005973 5.8e-14 84.0 50 70.0
SMO145G0037 Selaginella moellendorffii HOM05D004447 ORTHO05D005973 3.8e-13 81.3 66 53.0
Nn2g15472 Nelumbo nucifera HOM05D004447 ORTHO05D005973 1.1e-12 79.7 68 55.9
ECA238G3100 Erigeron canadensis HOM05D004447 ORTHO05D005973 4.2e-12 77.8 65 56.9
Zm00001eb374440 Zea mays HOM05D004447 ORTHO05D005973 9.3e-12 76.6 78 47.4
FvH4_1g30421 Fragaria vesca HOM05D004447 ORTHO05D005973 1.2e-11 76.3 43 76.7
FAN28G2360 Fragaria x ananassa HOM05D004447 ORTHO05D005973 6.0e-11 73.9 41 78.0
Mapoly0041s0101 Marchantia polymorpha HOM05D004447 ORTHO05D005973 1.0e-10 73.2 71 52.1
ATR0605G286 Amborella trichopoda HOM05D004447 ORTHO05D005973 3.0e-10 71.6 44 63.6
GSVIVG01001926001 Vitis vinifera HOM05D004447 ORTHO05D005973 1.4e-07 62.8 45 66.7
MD11G1197200 Malus domestica HOM05D004447 ORTHO05D005973 2.4e-07 62.0 45 64.4
Pp3c9_1080 Physcomitrium patens HOM05D004447 ORTHO05D005973 2.4e-07 62.0 64 46.9
CBR_g41485 Chara braunii HOM05D004447 ORTHO05D005973 6.9e-07 60.5 63 41.3
ClCG08G000120 Citrullus lanatus HOM05D004447 ORTHO05D005973 6.9e-07 60.5 45 57.8
AagrBONN_evm.TU.Sc2ySwM_368.1065 Anthoceros agrestis HOM05D004447 ORTHO05D005973 7.6e-06 57.0 66 39.4


User provided reference genes

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