Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia14839 Actinidia chinensis HOM05D001377 ORTHO05D001221 1.9e-59 232.3 112 100.0
Actinidia16605 Actinidia chinensis HOM05D001377 ORTHO05D001221 1.0e-28 130.2 99 75.8
GSVIVG01011972001 Vitis vinifera HOM05D001377 ORTHO05D001221 3.7e-15 85.1 82 57.3
Dinv16523 Davidia involucrata HOM05D001377 ORTHO05D001221 8.2e-15 84.0 83 59.0
Dinv05807 Davidia involucrata HOM05D001377 ORTHO05D001221 1.7e-12 76.3 82 56.1
Manes.06G074000 Manihot esculenta HOM05D001377 ORTHO05D001221 6.5e-12 74.3 117 47.9
Hma1.2p1_0605F.1_g187860 Hydrangea macrophylla HOM05D001377 ORTHO05D001221 2.1e-10 69.3 103 47.6
Potri.008G114800 Populus trichocarpa HOM05D001377 ORTHO05D001221 8.0e-10 67.4 117 47.9
Oeu041875.1 Olea europaea HOM05D001377 ORTHO05D001221 1.0e-09 67.0 86 47.7
Thecc.02G363000 Theobroma cacao HOM05D001377 ORTHO05D001221 1.0e-09 67.0 87 48.3
Nn4g23682 Nelumbo nucifera HOM05D001377 ORTHO05D001221 1.8e-09 66.2 93 48.4
Sabra08G0087000 Salix brachista HOM05D001377 ORTHO05D001221 1.8e-09 66.2 117 47.9
MD13G1048500 Malus domestica HOM05D001377 ORTHO05D001221 2.3e-09 65.9 84 51.2
Nn3g17678 Nelumbo nucifera HOM05D001377 ORTHO05D001221 5.2e-09 64.7 92 50.0
Gorai.008G187500 Gossypium raimondii HOM05D001377 ORTHO05D001221 1.2e-08 63.5 87 48.3
TWI79G1631 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 1.5e-08 63.2 85 49.4
Gohir.D12G174900 Gossypium hirsutum HOM05D001377 ORTHO05D001221 2.6e-08 62.4 87 48.3
TAR371G0717 Trochodendron aralioides HOM05D001377 ORTHO05D001221 2.6e-08 62.4 90 47.8
Prupe.1G303700 Prunus persica HOM05D001377 ORTHO05D001221 3.4e-08 62.0 105 43.8
AT1G13220 Arabidopsis thaliana HOM05D001377 ORTHO05D001221 4.4e-08 61.6 90 45.6
Gohir.A12G172400 Gossypium hirsutum HOM05D001377 ORTHO05D001221 4.4e-08 61.6 87 47.1
Lj6C767T7 Lonicera japonica HOM05D001377 ORTHO05D001221 4.4e-08 61.6 87 49.4
MD16G1049800 Malus domestica HOM05D001377 ORTHO05D001221 4.4e-08 61.6 84 47.6
QL01p000954 Quercus lobata HOM05D001377 ORTHO05D001221 7.5e-08 60.8 80 51.2
CSS0008376 Camellia sinensis var. sinensis HOM05D001377 ORTHO05D001221 9.8e-08 60.5 99 45.5
Thhalv10006601m.g Eutrema salsugineum HOM05D001377 ORTHO05D001221 1.3e-07 60.1 90 44.4
TAR629G1866 Trochodendron aralioides HOM05D001377 ORTHO05D001221 2.2e-07 59.3 92 44.6
CANSAT11G1821 Cannabis sativa HOM05D001377 ORTHO05D001221 4.8e-07 58.2 84 44.0
MSTRG.810 Avicennia marina HOM05D001377 ORTHO05D001221 8.3e-07 57.4 82 47.6
COL.COLO4_09722 Corchorus olitorius HOM05D001377 ORTHO05D001221 1.8e-06 56.2 86 46.5
TWI31G1272 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 2.4e-06 55.8 85 47.1
DCAR_007220 Daucus carota HOM05D001377 ORTHO05D001221 3.1e-06 55.5 92 45.7
Duzib251G0529 Durio zibethinus HOM05D001377 ORTHO05D001221 5.4e-06 54.7 90 44.4
HanXRQChr16g0528821 Helianthus annuus HOM05D001377 ORTHO05D001221 7.0e-06 54.3 83 43.4


User provided reference genes

Program Settings