Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc622G20 Aethionema arabicum HOM05D003723 ORTHO05D004306 0.0e+00 1797.7 876 100.0
AL6G41310 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 0.0e+00 1413.7 824 85.3
Thhalv10028433m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 0.0e+00 1411.4 822 85.3
Sp6g10450 Schrenkiella parvula HOM05D003723 ORTHO05D004306 0.0e+00 1408.7 821 85.1
AT4G07410 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 0.0e+00 1401.0 824 84.7
BcaB01g02881 Brassica carinata HOM05D003723 ORTHO05D004306 0.0e+00 1395.6 821 84.7
Carub.0006s2652 Capsella rubella HOM05D003723 ORTHO05D004306 0.0e+00 1393.6 824 84.1
BolC3t15689H Brassica oleracea HOM05D003723 ORTHO05D004306 0.0e+00 1380.5 821 83.6
C03p33700 Brassica napus HOM05D003723 ORTHO05D004306 0.0e+00 1380.2 821 83.6
CARHR287080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 0.0e+00 1377.5 822 83.7
A03p27910 Brassica napus HOM05D003723 ORTHO05D004306 0.0e+00 1374.8 821 83.3
BcaC01g04785 Brassica carinata HOM05D003723 ORTHO05D004306 0.0e+00 1374.0 819 83.8
BraA03t12004Z Brassica rapa HOM05D003723 ORTHO05D004306 0.0e+00 1374.0 821 83.3
AL1G40900 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 0.0e+00 1275.8 822 76.3
Carub.0001s2603 Capsella rubella HOM05D003723 ORTHO05D004306 0.0e+00 1255.0 822 75.1
AT1G27470 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 0.0e+00 1250.7 822 75.3
Thhalv10006817m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 0.0e+00 1249.2 823 75.2
Sp1g23720 Schrenkiella parvula HOM05D003723 ORTHO05D004306 0.0e+00 1240.3 822 74.8
CARHR027080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 0.0e+00 1215.7 822 72.7
THA.LOC104824968 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 0.0e+00 1211.4 833 73.5
Cpa.g.sc142.42 Carica papaya HOM05D003723 ORTHO05D004306 0.0e+00 1192.2 827 70.1
BcaC05g26751 Brassica carinata HOM05D003723 ORTHO05D004306 0.0e+00 1191.4 824 72.6
BcaC01g01603 Brassica carinata HOM05D003723 ORTHO05D004306 0.0e+00 1178.3 822 72.0
BraA08t34575Z Brassica rapa HOM05D003723 ORTHO05D004306 0.0e+00 1178.3 823 72.1
C03p74200 Brassica napus HOM05D003723 ORTHO05D004306 0.0e+00 1177.2 823 72.2
Aa31LG7G10210 Aethionema arabicum HOM05D003723 ORTHO05D004306 0.0e+00 1174.8 822 72.0
BcaC01g06947 Brassica carinata HOM05D003723 ORTHO05D004306 0.0e+00 1174.8 822 72.1
BcaC05g26567 Brassica carinata HOM05D003723 ORTHO05D004306 0.0e+00 1171.0 823 71.4
A08p26240 Brassica napus HOM05D003723 ORTHO05D004306 0.0e+00 1170.2 823 71.6
THA.LOC104825785 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 0.0e+00 1168.3 822 71.3
BraA09t39357Z Brassica rapa HOM05D003723 ORTHO05D004306 0.0e+00 1165.6 819 71.7
A09p38510 Brassica napus HOM05D003723 ORTHO05D004306 0.0e+00 1153.3 811 71.9
C05p26190 Brassica napus HOM05D003723 ORTHO05D004306 0.0e+00 1150.6 820 71.1
BolC5t31333H Brassica oleracea HOM05D003723 ORTHO05D004306 0.0e+00 1149.0 809 71.9
BolC3t19677H Brassica oleracea HOM05D003723 ORTHO05D004306 0.0e+00 1139.8 807 71.5
Cfa013762 Carpinus fangiana HOM05D003723 ORTHO05D004306 0.0e+00 1088.9 843 65.0
Potri.014G014900 Populus trichocarpa HOM05D003723 ORTHO05D004306 0.0e+00 1080.1 834 65.9
CSS0046104 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 0.0e+00 1077.8 838 65.3
Sabra14G0008900 Salix brachista HOM05D003723 ORTHO05D004306 0.0e+00 1076.2 836 65.2
Potri.002G117500 Populus trichocarpa HOM05D003723 ORTHO05D004306 4.2e-311 1071.2 835 64.2
Prupe.1G421300 Prunus persica HOM05D003723 ORTHO05D004306 4.2e-311 1071.2 833 65.8
QL12p038269 Quercus lobata HOM05D003723 ORTHO05D004306 2.6e-310 1068.5 836 64.5
QL93p0154_0009 Quercus lobata HOM05D003723 ORTHO05D004306 3.5e-310 1068.1 836 64.5
Haze_22418 Corylus avellana HOM05D003723 ORTHO05D004306 5.9e-310 1067.4 881 62.2
Dinv44943 Davidia involucrata HOM05D003723 ORTHO05D004306 1.7e-309 1065.8 837 64.5
Atru.chr13.849 Acer truncatum HOM05D003723 ORTHO05D004306 2.2e-309 1065.4 838 63.2
CiPaw.08G050900 Carya illinoinensis HOM05D003723 ORTHO05D004306 1.9e-308 1062.4 843 64.2
Sabra02G0092000 Salix brachista HOM05D003723 ORTHO05D004306 1.6e-307 1059.3 853 63.2
Ciclev10000301m.g Citrus clementina HOM05D003723 ORTHO05D004306 1.4e-306 1056.2 831 63.3
CiPaw.07G173600 Carya illinoinensis HOM05D003723 ORTHO05D004306 2.6e-305 1052.0 844 63.4
Manes.02G183600 Manihot esculenta HOM05D003723 ORTHO05D004306 3.4e-305 1051.6 839 63.3
TWI56G1015 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 4.4e-305 1051.2 837 62.7
MELO3C016827.2 Cucumis melo HOM05D003723 ORTHO05D004306 2.7e-302 1042.0 834 63.9
MD15G1067400 Malus domestica HOM05D003723 ORTHO05D004306 4.5e-302 1041.2 836 64.0
MD08G1080300 Malus domestica HOM05D003723 ORTHO05D004306 2.9e-301 1038.5 834 63.5
CsaV3_4G035140 Cucumis sativus L. HOM05D003723 ORTHO05D004306 8.9e-298 1026.9 834 62.8
Thecc.04G063000 Theobroma cacao HOM05D003723 ORTHO05D004306 2.2e-296 1022.3 836 62.1
Eucgr.F02239 Eucalyptus grandis HOM05D003723 ORTHO05D004306 1.4e-295 1019.6 836 61.7
ClCG05G020690 Citrullus lanatus HOM05D003723 ORTHO05D004306 1.8e-295 1019.2 836 62.7
TAR628G0363 Trochodendron aralioides HOM05D003723 ORTHO05D004306 1.8e-295 1019.2 833 62.1
Sed0028163 Sechium edule HOM05D003723 ORTHO05D004306 1.2e-294 1016.5 833 62.2
TWI12G0955 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 1.2e-294 1016.5 834 62.2
Cc10_g05060 Coffea canephora HOM05D003723 ORTHO05D004306 2.0e-294 1015.8 836 61.1
AUR62022465 Chenopodium quinoa HOM05D003723 ORTHO05D004306 7.8e-294 1013.8 847 60.6
Lj4A757T32 Lonicera japonica HOM05D003723 ORTHO05D004306 1.9e-292 1009.2 841 60.8
MSTRG.24381 Avicennia marina HOM05D003723 ORTHO05D004306 4.0e-290 1001.5 855 59.8
AUR62043254 Chenopodium quinoa HOM05D003723 ORTHO05D004306 4.4e-289 998.0 833 60.1
Nitab4.5_0003725g0010 Nicotiana tabacum HOM05D003723 ORTHO05D004306 5.8e-289 997.7 836 61.1
CANSAT25G0987 Cannabis sativa HOM05D003723 ORTHO05D004306 2.9e-288 995.3 829 60.1
Gohir.D10G114400 Gossypium hirsutum HOM05D003723 ORTHO05D004306 4.9e-288 994.6 838 60.3
Gorai.011G126100 Gossypium raimondii HOM05D003723 ORTHO05D004306 4.9e-288 994.6 837 60.2
PGR031G2627 Punica granatum HOM05D003723 ORTHO05D004306 2.4e-287 992.3 838 60.0
Duzib151G0173 Durio zibethinus HOM05D003723 ORTHO05D004306 5.4e-287 991.1 842 60.5
SGA_v2.0_scaffold28G11839 Striga asiatica HOM05D003723 ORTHO05D004306 1.2e-286 989.9 837 60.2
EL10Ac1g02364 Beta vulgaris HOM05D003723 ORTHO05D004306 6.0e-286 987.6 835 58.3
Nitab4.5_0000497g0070 Nicotiana tabacum HOM05D003723 ORTHO05D004306 6.6e-285 984.2 833 60.4
ECA247G0551 Erigeron canadensis HOM05D003723 ORTHO05D004306 8.6e-285 983.8 838 58.1
Nitab4.5_0002314g0030 Nicotiana tabacum HOM05D003723 ORTHO05D004306 3.3e-284 981.9 838 59.4
DCAR_009874 Daucus carota HOM05D003723 ORTHO05D004306 1.6e-283 979.5 845 59.5
Gohir.A02G089200 Gossypium hirsutum HOM05D003723 ORTHO05D004306 4.7e-283 978.0 837 59.3
Lj4C72T17 Lonicera japonica HOM05D003723 ORTHO05D004306 8.1e-283 977.2 833 59.7
FvH4_2g32880 Fragaria vesca HOM05D003723 ORTHO05D004306 1.8e-282 976.1 848 61.0
FAN24G1723 Fragaria x ananassa HOM05D003723 ORTHO05D004306 4.0e-282 974.9 848 61.0
RcHm_v2.0_Chr6g0309831 Rosa chinensis HOM05D003723 ORTHO05D004306 6.8e-282 974.2 848 60.4
Sc02g0007980 Simmondsia chinensis HOM05D003723 ORTHO05D004306 1.2e-281 973.4 833 59.3
Lalb_Chr22g0355711 Lupinus albus HOM05D003723 ORTHO05D004306 9.8e-281 970.3 825 58.9
FAN15G1506 Fragaria x ananassa HOM05D003723 ORTHO05D004306 1.3e-280 969.9 848 60.3
HanXRQChr10g0292141 Helianthus annuus HOM05D003723 ORTHO05D004306 1.1e-279 966.8 824 59.3
PGSC0003DMG400011543 Solanum tuberosum HOM05D003723 ORTHO05D004306 1.1e-279 966.8 841 58.6
Nitab4.5_0009040g0020 Nicotiana tabacum HOM05D003723 ORTHO05D004306 2.4e-279 965.7 879 57.2
FAN20G3047 Fragaria x ananassa HOM05D003723 ORTHO05D004306 4.1e-279 964.9 848 60.1
PGSC0003DMG401010623 Solanum tuberosum HOM05D003723 ORTHO05D004306 1.2e-278 963.4 830 59.5
Sopen12g030290 Solanum pennellii HOM05D003723 ORTHO05D004306 3.5e-278 961.8 841 58.1
vmacro16900 Vaccinium macrocarpon HOM05D003723 ORTHO05D004306 7.8e-278 960.7 824 60.3
Peaxi162Scf00081g02729 Petunia axillaris HOM05D003723 ORTHO05D004306 5.1e-277 958.0 897 56.4
CSS0010741 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 1.1e-276 956.8 711 67.8
Solyc04g077680.3 Solanum lycopersicum HOM05D003723 ORTHO05D004306 3.3e-276 955.3 830 59.0
Sopen04g031320 Solanum pennellii HOM05D003723 ORTHO05D004306 5.6e-276 954.5 830 59.2
arahy.Tifrunner.gnm1.ann1.82WHW6 Arachis hypogaea HOM05D003723 ORTHO05D004306 1.2e-275 953.4 820 57.7
Gohir.D02G112100 Gossypium hirsutum HOM05D003723 ORTHO05D004306 2.8e-275 952.2 836 58.4
HanXRQChr10g0292161 Helianthus annuus HOM05D003723 ORTHO05D004306 3.6e-275 951.8 829 58.5
Solyc12g088290.2 Solanum lycopersicum HOM05D003723 ORTHO05D004306 1.1e-274 950.3 840 57.6
Lalb_Chr14g0368121 Lupinus albus HOM05D003723 ORTHO05D004306 3.1e-274 948.7 828 57.9
Aqoxy3G00456 Aquilegia oxysepala HOM05D003723 ORTHO05D004306 5.2e-274 948.0 829 59.5
Gorai.005G127000 Gossypium raimondii HOM05D003723 ORTHO05D004306 3.4e-273 945.3 865 56.8
Glyma.14G089042 Glycine max HOM05D003723 ORTHO05D004306 5.8e-273 944.5 835 58.1
Hma1.2p1_0210F.1_g089420 Hydrangea macrophylla HOM05D003723 ORTHO05D004306 1.3e-272 943.3 774 63.6
Peaxi162Scf00160g00521 Petunia axillaris HOM05D003723 ORTHO05D004306 2.2e-272 942.6 818 59.0
FAN27G2988 Fragaria x ananassa HOM05D003723 ORTHO05D004306 4.9e-272 941.4 848 59.3
Lj5g0007294 Lotus japonicus HOM05D003723 ORTHO05D004306 4.1e-271 938.3 824 57.4
Hund05292 Selenicereus undatus HOM05D003723 ORTHO05D004306 7.1e-271 937.6 740 63.6
arahy.Tifrunner.gnm1.ann1.YU9IEB Arachis hypogaea HOM05D003723 ORTHO05D004306 3.5e-270 935.3 824 57.6
PSO541G5768 Papaver somniferum HOM05D003723 ORTHO05D004306 5.1e-269 931.4 831 56.8
Manes.18G095200 Manihot esculenta HOM05D003723 ORTHO05D004306 4.3e-268 928.3 726 63.6
Glyma.17G233900 Glycine max HOM05D003723 ORTHO05D004306 5.6e-268 927.9 837 57.5
SalBow2G1921 Salvia bowleyana HOM05D003723 ORTHO05D004306 3.6e-267 925.2 781 59.5
Oeu014279.1 Olea europaea HOM05D003723 ORTHO05D004306 1.6e-262 909.8 760 60.1
VMungo0647G0070 Vigna mungo HOM05D003723 ORTHO05D004306 6.0e-262 907.9 834 57.3
GSVIVG01009321001 Vitis vinifera HOM05D003723 ORTHO05D004306 1.0e-261 907.1 827 58.0
Gohir.A10G151900 Gossypium hirsutum HOM05D003723 ORTHO05D004306 3.0e-261 905.6 834 56.6
PSO017G5808 Papaver somniferum HOM05D003723 ORTHO05D004306 3.0e-261 905.6 833 55.7
Phvul.001G028900 Phaseolus vulgaris HOM05D003723 ORTHO05D004306 3.3e-260 902.1 851 56.6
SGA_v2.0_scaffold152G36813 Striga asiatica HOM05D003723 ORTHO05D004306 1.6e-259 899.8 837 55.2
COL.COLO4_29256 Corchorus olitorius HOM05D003723 ORTHO05D004306 3.5e-254 882.1 835 56.4
Ah.05g167030 Amaranthus hybridus HOM05D003723 ORTHO05D004306 6.0e-254 881.3 776 58.0
DCAR_012822 Daucus carota HOM05D003723 ORTHO05D004306 2.8e-251 872.5 834 54.9
DCAR_004814 Daucus carota HOM05D003723 ORTHO05D004306 1.8e-250 869.8 866 53.6
Sed0011873 Sechium edule HOM05D003723 ORTHO05D004306 5.8e-249 864.8 734 60.5
Psat6g017680 Pisum sativum HOM05D003723 ORTHO05D004306 7.6e-249 864.4 830 54.9
CDE07G0463 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 7.1e-247 857.8 768 57.0
Ca_13209_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 5.8e-241 838.2 828 52.3
TPR.G12983 Trifolium pratense HOM05D003723 ORTHO05D004306 4.3e-236 822.0 833 52.8
Zm00001eb056350 Zea mays HOM05D003723 ORTHO05D004306 9.6e-236 820.8 843 53.1
Os03g0735100 Oryza sativa ssp. japonica HOM05D003723 ORTHO05D004306 1.6e-235 820.1 835 52.2
Actinidia10210 Actinidia chinensis HOM05D003723 ORTHO05D004306 3.4e-233 812.4 640 64.4
ATR0739G177 Amborella trichopoda HOM05D003723 ORTHO05D004306 2.2e-232 809.7 840 51.7
Zm00001eb215430 Zea mays HOM05D003723 ORTHO05D004306 2.2e-232 809.7 841 52.6
unitig_0.g1045 Utricularia gibba HOM05D003723 ORTHO05D004306 2.1e-230 803.1 838 51.3
Medtr1g017880 Medicago truncatula HOM05D003723 ORTHO05D004306 4.8e-227 792.0 840 49.8
HPP92_003353 Vanilla planifolia HOM05D003723 ORTHO05D004306 7.7e-217 758.1 701 55.9
Medtr8g014080 Medicago truncatula HOM05D003723 ORTHO05D004306 1.0e-216 757.7 823 50.1
TPR.G32238 Trifolium pratense HOM05D003723 ORTHO05D004306 1.3e-216 757.3 843 49.7
Lsat_1_v5_gn_1_1120 Lactuca sativa HOM05D003723 ORTHO05D004306 2.4e-178 630.2 588 58.0
Ca_23258_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 7.5e-172 608.6 728 47.3
Mapoly0027s0127 Marchantia polymorpha HOM05D003723 ORTHO05D004306 5.2e-165 585.9 912 38.3
SMO367G0860 Selaginella moellendorffii HOM05D003723 ORTHO05D004306 5.8e-164 582.4 856 39.5
Pp3c22_14490 Physcomitrium patens HOM05D003723 ORTHO05D004306 6.4e-163 578.9 916 38.8
Dinv39214 Davidia involucrata HOM05D003723 ORTHO05D004306 5.1e-152 542.7 430 64.2
Pp3c19_13580 Physcomitrium patens HOM05D003723 ORTHO05D004306 1.4e-149 534.6 928 36.7
CBR_g57871 Chara braunii HOM05D003723 ORTHO05D004306 8.4e-139 498.8 912 36.0
CDE04G2329 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 2.4e-138 497.3 412 60.7
DCAR_032227 Daucus carota HOM05D003723 ORTHO05D004306 2.2e-123 447.6 457 52.5
Oeu036976.1 Olea europaea HOM05D003723 ORTHO05D004306 1.1e-114 418.7 318 66.4
AagrBONN_evm.TU.Sc2ySwM_344.864 Anthoceros agrestis HOM05D003723 ORTHO05D004306 3.0e-112 410.6 641 38.8
SEGI_24646 Sequoiadendron giganteum HOM05D003723 ORTHO05D004306 3.4e-108 397.1 518 44.2
Actinidia19301 Actinidia chinensis HOM05D003723 ORTHO05D004306 1.0e-107 395.6 294 66.7
Lsat_1_v5_gn_1_440 Lactuca sativa HOM05D003723 ORTHO05D004306 9.4e-90 335.9 264 64.0
Actinidia19302 Actinidia chinensis HOM05D003723 ORTHO05D004306 1.6e-89 335.1 254 63.4
SEGI_10786 Sequoiadendron giganteum HOM05D003723 ORTHO05D004306 5.3e-85 320.1 313 53.0
Pp3c18_6690 Physcomitrium patens HOM05D003723 ORTHO05D004306 1.7e-75 288.5 648 32.1
Lsat_1_v5_gn_0_45940 Lactuca sativa HOM05D003723 ORTHO05D004306 8.0e-73 279.6 226 60.2
DCAR_032226 Daucus carota HOM05D003723 ORTHO05D004306 8.9e-64 249.6 263 49.8
Dinv39213 Davidia involucrata HOM05D003723 ORTHO05D004306 1.3e-59 235.7 162 68.5
MCO10G249 Micromonas commoda HOM05D003723 ORTHO05D004306 9.5e-58 229.6 940 23.6
Oeu053086.3 Olea europaea HOM05D003723 ORTHO05D004306 1.5e-55 222.2 269 47.2
Cre13.g606850 Chlamydomonas reinhardtii HOM05D003723 ORTHO05D004306 4.7e-49 200.7 897 24.6
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 9.2e-45 186.4 211 50.2
TAR376G0468 Trochodendron aralioides HOM05D003723 ORTHO05D004306 4.3e-42 177.6 119 73.1
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 1.4e-40 172.6 208 46.6
CDE04G2756 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 3.1e-40 171.4 191 47.6
HanXRQChr14g0443971 Helianthus annuus HOM05D003723 ORTHO05D004306 5.2e-40 170.6 204 47.1
TAR376G0365 Trochodendron aralioides HOM05D003723 ORTHO05D004306 2.9e-38 164.9 111 73.0
PRCOL_00004412 Prasinoderma coloniale HOM05D003723 ORTHO05D004306 2.4e-37 161.8 552 27.9
Migut.N02791 Erythranthe guttata HOM05D003723 ORTHO05D004306 6.0e-36 157.1 99 74.7
TAR376G0760 Trochodendron aralioides HOM05D003723 ORTHO05D004306 4.8e-33 147.5 104 65.4
Cfa027112 Carpinus fangiana HOM05D003723 ORTHO05D004306 5.1e-27 127.5 371 27.8
CSS0002287 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 4.6e-20 104.4 111 46.8
CSS0021932 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 1.8e-19 102.4 111 46.8
CSS0044410 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 2.3e-19 102.1 111 47.7
HanXRQChr15g0495401 Helianthus annuus HOM05D003723 ORTHO05D004306 3.9e-19 101.3 112 49.1
Psat7g031120 Pisum sativum HOM05D003723 ORTHO05D004306 1.1e-18 99.8 91 54.9
CSS0047227 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 7.4e-18 97.1 111 45.0
CSS0041779 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 3.2e-13 81.6 109 43.1
CAN.G400.11 Capsicum annuum HOM05D002670 ORTHO05D000002 3.7e-09 68.2 107 39.3
HPP92_021206 Vanilla planifolia HOM05D006479 ORTHO05D008310 6.9e-08 63.9 149 29.5
CSS0003704 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 2.6e-07 62.0 111 35.1


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