Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 2667.9 1347 100.0
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 2139.8 1350 79.9
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 2132.5 1350 79.9
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 2119.0 1350 79.9
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 2116.7 1350 79.8
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 2082.8 1350 78.7
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 2070.4 1353 78.2
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 2067.4 1353 77.5
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 2067.4 1353 77.5
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 2060.4 1354 77.3
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1968.0 1350 75.4
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1908.3 1349 71.8
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1851.6 1187 79.2
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1607.0 1362 60.9
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1598.6 1353 60.9
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1591.6 1358 60.6
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1587.8 1358 60.0
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1581.2 1358 59.6
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1572.8 1360 59.9
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1565.1 1358 59.9
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1563.1 1359 59.2
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1562.0 1361 59.2
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1560.4 1358 59.9
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1557.7 1365 59.0
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1554.7 1365 58.7
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1554.7 1363 59.4
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1553.1 1356 58.8
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1552.7 1365 58.8
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1552.0 1365 58.8
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1551.6 1365 58.8
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1550.8 1360 59.6
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1542.3 1362 58.8
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1537.7 1272 62.6
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1537.3 1360 58.2
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1536.9 1361 58.1
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1527.3 1355 57.8
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1526.9 1356 57.5
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1517.7 1363 58.0
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1513.4 1360 58.1
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1508.4 1353 57.1
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1500.7 1354 57.1
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1499.6 1355 57.0
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1499.6 1353 56.8
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1493.8 1372 56.2
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1492.6 1355 56.8
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1489.9 1351 56.9
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1489.2 1359 56.1
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1486.1 1365 56.4
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1483.8 1358 57.4
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1474.5 1367 56.4
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1473.8 1276 60.3
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1473.4 1283 58.8
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1469.5 1352 56.4
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1463.4 1357 56.0
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1463.0 1356 56.3
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1462.6 1359 55.7
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1456.4 1370 55.3
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1456.0 1352 55.4
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1455.7 1355 55.7
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1454.1 1356 55.5
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1453.7 1358 55.8
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1453.7 1355 56.1
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1451.0 1376 54.8
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1449.9 1364 55.4
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1449.1 1379 55.0
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1448.7 1313 57.7
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1444.5 1352 55.7
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1442.2 1357 55.4
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1438.7 1369 55.9
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1427.2 1356 54.1
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1424.5 1301 57.0
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1422.5 1374 54.0
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1414.1 1363 54.7
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1409.4 1373 54.6
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1397.1 1297 55.8
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1392.9 1357 54.5
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1392.1 1275 57.1
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1389.8 1354 54.6
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1382.9 1347 54.3
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1369.4 1191 57.9
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1368.2 1127 63.0
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1360.9 1353 53.2
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1357.8 1350 53.0
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1351.7 1353 52.8
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1312.0 1133 59.7
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1290.0 1307 53.8
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1275.8 1166 56.4
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1275.4 1141 57.6
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1263.4 1374 48.8
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1260.4 1374 48.7
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1248.8 1378 49.3
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1240.3 1126 57.1
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1226.8 1562 45.9
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1211.1 1359 47.5
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1205.7 1355 50.0
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1083.2 947 58.3
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 3.8e-308 1062.0 902 59.2
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 2.4e-302 1042.7 1259 46.5
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 1.3e-300 1036.9 1352 43.7
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 7.5e-288 994.6 873 59.1
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 3.4e-272 942.6 787 61.9
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 7.4e-235 818.5 1404 35.8
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 3.4e-224 783.1 1220 38.8
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 1.9e-219 767.3 1220 38.4
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 1.8e-212 744.2 1327 36.8
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 1.4e-204 718.0 854 45.2
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.0e-199 701.8 829 47.2
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 4.7e-149 533.5 1526 30.0
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 5.8e-131 473.4 490 53.1
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 3.4e-123 447.6 388 59.8
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 2.9e-114 417.9 378 54.5
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 2.3e-95 355.1 1568 26.3
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 9.7e-78 296.6 315 51.4
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 1.6e-75 289.3 1546 24.8
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 6.5e-66 257.3 258 51.2
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.0e-59 235.7 226 57.1
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 1.4e-55 223.0 1292 23.8
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 1.3e-50 206.5 305 38.7
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 5.8e-46 191.0 1381 24.5
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 7.5e-46 190.7 197 54.8
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 2.0e-38 166.0 130 66.2
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 7.8e-35 154.1 120 65.8
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 1.9e-33 149.4 138 57.2
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 4.1e-28 131.7 234 35.5
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 7.1e-28 131.0 138 51.4
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 3.5e-27 128.6 227 34.4


User provided reference genes

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