Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G12510 Aethionema arabicum HOM05D002338 ORTHO05D006102 4.6e-302 1040.4 523 100.0
Sp7g33320 Schrenkiella parvula HOM05D002338 ORTHO05D006102 1.9e-202 709.5 525 69.1
CARHR243880 Cardamine hirsuta HOM05D002338 ORTHO05D006102 6.9e-197 691.0 537 66.3
AT4G35540 Arabidopsis thaliana HOM05D002338 ORTHO05D006102 1.0e-192 677.2 530 65.8
AL7G15620 Arabidopsis lyrata HOM05D002338 ORTHO05D006102 1.0e-187 660.6 533 64.5
Thhalv10027569m.g Eutrema salsugineum HOM05D002338 ORTHO05D006102 2.6e-180 636.0 528 64.0
BcaB03g12416 Brassica carinata HOM05D002338 ORTHO05D006102 4.7e-169 598.6 520 60.6
BraA01t00291Z Brassica rapa HOM05D002338 ORTHO05D006102 4.7e-169 598.6 522 60.2
A01p03070 Brassica napus HOM05D002338 ORTHO05D006102 2.8e-166 589.3 521 58.3
THA.LOC104827541 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 2.8e-166 589.3 551 55.9
BcaNung00583 Brassica carinata HOM05D002338 ORTHO05D006102 2.4e-165 586.3 520 58.8
C01p03420 Brassica napus HOM05D002338 ORTHO05D006102 2.4e-165 586.3 520 58.8
BolC1t00329H Brassica oleracea HOM05D002338 ORTHO05D006102 2.4e-165 586.3 520 58.8
THA.LOC104826474 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 2.4e-165 586.3 550 55.8
Cpa.g.sc7.51 Carica papaya HOM05D002338 ORTHO05D006102 1.1e-146 524.2 532 51.3
Duzib138G0048 Durio zibethinus HOM05D002338 ORTHO05D006102 2.4e-133 479.9 533 48.0
QL05p046957 Quercus lobata HOM05D002338 ORTHO05D006102 2.4e-133 479.9 543 47.1
Ciclev10031207m.g Citrus clementina HOM05D002338 ORTHO05D006102 7.8e-132 474.9 539 49.5
Dinv32217 Davidia involucrata HOM05D002338 ORTHO05D006102 1.4e-128 464.2 531 47.1
VMungo1215G0129 Vigna mungo HOM05D002338 ORTHO05D006102 1.4e-128 464.2 533 47.5
Manes.06G033800 Manihot esculenta HOM05D002338 ORTHO05D006102 4.0e-128 462.6 539 48.2
arahy.Tifrunner.gnm1.ann1.2YH6BX Arachis hypogaea HOM05D002338 ORTHO05D006706 6.8e-128 461.8 534 47.9
Gorai.007G174700 Gossypium raimondii HOM05D002338 ORTHO05D006102 1.3e-126 457.6 532 46.4
Prupe.4G060500 Prunus persica HOM05D002338 ORTHO05D006102 1.3e-126 457.6 544 45.8
Gohir.D11G163900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 2.9e-126 456.4 532 46.6
Hma1.2p1_0987F.1_g244570 Hydrangea macrophylla HOM05D002338 ORTHO05D006102 2.9e-126 456.4 531 46.1
AUR62031197 Chenopodium quinoa HOM05D002338 ORTHO05D006102 3.2e-125 453.0 545 44.2
Lj1P636T28 Lonicera japonica HOM05D002338 ORTHO05D006102 3.2e-125 453.0 528 45.8
Glyma.01G042900 Glycine max HOM05D002338 ORTHO05D006102 2.0e-124 450.3 535 46.0
CSS0032914 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 2.7e-124 449.9 536 44.8
CiPaw.10G058500 Carya illinoinensis HOM05D002338 ORTHO05D006102 3.5e-124 449.5 538 47.0
ClCG03G007760 Citrullus lanatus HOM05D002338 ORTHO05D006102 4.6e-124 449.1 538 46.5
Peaxi162Scf00753g00411 Petunia axillaris HOM05D002338 ORTHO05D006102 4.6e-124 449.1 531 45.4
Cc02_g14860 Coffea canephora HOM05D002338 ORTHO05D006102 7.8e-124 448.4 524 44.3
MD05G1301900 Malus domestica HOM05D002338 ORTHO05D006102 1.3e-123 447.6 547 46.1
Sabra04G0055900 Salix brachista HOM05D002338 ORTHO05D006102 1.7e-123 447.2 539 46.4
MSTRG.7403 Avicennia marina HOM05D002338 ORTHO05D006102 3.0e-123 446.4 525 45.1
Lalb_Chr18g0054471 Lupinus albus HOM05D002338 ORTHO05D006102 3.9e-123 446.0 539 45.6
Phvul.002G066000 Phaseolus vulgaris HOM05D002338 ORTHO05D006102 8.6e-123 444.9 536 45.7
CSS0007657 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 1.9e-122 443.7 533 44.7
COL.COLO4_08893 Corchorus olitorius HOM05D002338 ORTHO05D006102 1.9e-122 443.7 531 47.1
Rhsim13G0190300 Rhododendron simsii HOM05D002338 ORTHO05D006102 1.9e-122 443.7 537 44.5
AUR62036936 Chenopodium quinoa HOM05D002338 ORTHO05D006102 3.3e-122 443.0 544 43.9
Potri.004G084700 Populus trichocarpa HOM05D002338 ORTHO05D006102 4.3e-122 442.6 543 46.2
Oeu030709.1 Olea europaea HOM05D002338 ORTHO05D006102 5.6e-122 442.2 532 45.5
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 5.6e-122 442.2 539 46.0
Lj6g0008317 Lotus japonicus HOM05D002338 ORTHO05D006102 1.6e-121 440.7 541 44.9
Sed0024643 Sechium edule HOM05D002338 ORTHO05D006102 1.6e-121 440.7 535 46.0
Gohir.A11G156900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 2.8e-121 439.9 527 45.5
CAN.G943.27 Capsicum annuum HOM05D002338 ORTHO05D006102 4.7e-121 439.1 526 44.7
GSVIVG01021206001 Vitis vinifera HOM05D002338 ORTHO05D006102 4.7e-121 439.1 532 44.7
AUR62027671 Chenopodium quinoa HOM05D002338 ORTHO05D006102 6.2e-121 438.7 542 43.4
Rhsim09G0087800 Rhododendron simsii HOM05D002338 ORTHO05D006102 8.0e-121 438.3 534 44.6
Haze_06238 Corylus avellana HOM05D002338 ORTHO05D006102 1.8e-120 437.2 541 44.9
CsaV3_1G033380 Cucumis sativus L. HOM05D002338 ORTHO05D006102 2.3e-120 436.8 532 44.9
FAN05G5039 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.3e-120 436.8 530 45.1
RcHm_v2.0_Chr5g0010711 Rosa chinensis HOM05D002338 ORTHO05D006102 2.3e-120 436.8 527 45.4
Atru.chr2.3891 Acer truncatum HOM05D002338 ORTHO05D006102 3.1e-120 436.4 533 47.1
Sopen03g002200 Solanum pennellii HOM05D002338 ORTHO05D006102 5.2e-120 435.6 526 45.4
SGA_v2.0_scaffold1G00039 Striga asiatica HOM05D002338 ORTHO05D006102 6.8e-120 435.3 523 45.3
Ca_00873_v3 Cicer arietinum L. HOM05D002338 ORTHO05D006102 1.5e-119 434.1 536 46.1
MELO3C002646.2 Cucumis melo HOM05D002338 ORTHO05D006102 1.5e-119 434.1 531 44.4
FvH4_6g24910 Fragaria vesca HOM05D002338 ORTHO05D006102 2.6e-119 433.3 530 44.9
FAN14G3958 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.6e-119 433.3 527 45.0
Cfa000603 Carpinus fangiana HOM05D002338 ORTHO05D006102 3.4e-119 433.0 540 44.4
Migut.H00865 Erythranthe guttata HOM05D002338 ORTHO05D006102 3.7e-118 429.5 522 44.3
GSVIVG01026940001 Vitis vinifera HOM05D002338 ORTHO05D006102 4.9e-118 429.1 541 44.0
FAN05G1035 Fragaria x ananassa HOM05D002338 ORTHO05D006102 8.3e-118 428.3 522 44.8
FAN02G0479 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.1e-117 427.9 522 44.8
PGR004G1505 Punica granatum HOM05D002338 ORTHO05D006102 2.4e-117 426.8 532 43.0
PGSC0003DMG400004381 Solanum tuberosum HOM05D002338 ORTHO05D006102 3.2e-117 426.4 526 44.5
Ah.09g233540 Amaranthus hybridus HOM05D002338 ORTHO05D006102 1.2e-116 424.5 554 42.2
EL10Ac8g20603 Beta vulgaris HOM05D002338 ORTHO05D006102 6.0e-116 422.2 547 41.7
Medtr2g031410 Medicago truncatula HOM05D002338 ORTHO05D006102 1.0e-115 421.4 537 43.8
SalBow4G0953 Salvia bowleyana HOM05D002338 ORTHO05D006102 1.0e-115 421.4 527 43.3
unitig_736.g22955 Utricularia gibba HOM05D002338 ORTHO05D006102 6.6e-115 418.7 522 41.2
DCAR_005225 Daucus carota HOM05D002338 ORTHO05D006102 3.3e-114 416.4 542 43.4
ECA247G1464 Erigeron canadensis HOM05D002338 ORTHO05D006102 5.6e-114 415.6 536 43.8
SHI24483 Sapria himalayana HOM05D002338 ORTHO05D006102 1.6e-113 414.1 537 44.5
TAR698G0001 Trochodendron aralioides HOM05D002338 ORTHO05D006102 4.7e-113 412.5 536 43.7
TPR.G22268 Trifolium pratense HOM05D002338 ORTHO05D006102 4.0e-112 409.5 535 43.4
Nn1g04395 Nelumbo nucifera HOM05D002338 ORTHO05D006102 3.7e-110 402.9 533 44.1
Lsat_1_v5_gn_4_49520 Lactuca sativa HOM05D002338 ORTHO05D006102 1.2e-108 397.9 541 41.6
HanXRQChr16g0520661 Helianthus annuus HOM05D002338 ORTHO05D006102 1.6e-108 397.5 519 41.4
HanXRQChr16g0518871 Helianthus annuus HOM05D002338 ORTHO05D006102 2.3e-107 393.7 525 41.3
Thecc.01G169900 Theobroma cacao HOM05D002338 ORTHO05D006102 9.5e-106 388.3 450 47.3
TWI38G1256 Tripterygium wilfordii HOM05D002338 ORTHO05D006102 8.1e-105 385.2 452 47.6
CSS0015305 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 1.1e-104 384.8 538 40.9
CANSAT54G0294 Cannabis sativa HOM05D002338 ORTHO05D006102 4.4e-103 379.4 533 41.1
Aqoxy1G02082 Aquilegia oxysepala HOM05D002338 ORTHO05D006102 5.6e-98 362.5 539 40.4
PSO675G9291 Papaver somniferum HOM05D002338 ORTHO05D006102 6.9e-96 355.5 530 40.6
PSO541G5199 Papaver somniferum HOM05D002338 ORTHO05D006102 9.0e-96 355.1 530 40.4
Glyma.04G157100 Glycine max HOM05D002338 ORTHO05D006102 2.7e-92 343.6 535 39.3
CDE02G4213 Ceratophyllum demersum HOM05D002338 ORTHO05D006102 6.2e-89 332.4 551 37.6
Nitab4.5_0002076g0140 Nicotiana tabacum HOM05D002338 ORTHO05D006102 5.3e-88 329.3 522 38.3
MBI18_g09632_MAGBIO Magnolia biondii HOM05D002338 ORTHO05D006102 9.9e-87 325.1 538 38.7
Nitab4.5_0007975g0050 Nicotiana tabacum HOM05D002338 ORTHO05D006102 1.8e-83 314.3 516 39.1
Oeu017495.1 Olea europaea HOM05D002338 ORTHO05D006102 2.4e-80 303.9 528 36.0
BcaC01g00499 Brassica carinata HOM05D002338 ORTHO05D006102 5.3e-80 302.8 378 46.6
CSS0032678 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 1.5e-79 301.2 579 34.0
DCAR_030917 Daucus carota HOM05D002338 ORTHO05D006102 5.8e-79 299.3 446 41.0
Sc05g0007130 Simmondsia chinensis HOM05D002338 ORTHO05D006102 1.4e-77 294.7 548 35.0
Nn3g21334 Nelumbo nucifera HOM05D002338 ORTHO05D006102 7.1e-77 292.4 423 41.8
Atru.chr10.1675 Acer truncatum HOM05D002338 ORTHO05D006102 9.3e-77 292.0 301 49.8
Lj2A298G34 Lonicera japonica HOM05D002338 ORTHO05D006102 5.6e-74 282.7 480 37.3
BcaNung03635 Brassica carinata HOM05D002338 ORTHO05D006102 6.5e-70 269.2 197 65.5
Migut.M01042 Erythranthe guttata HOM05D002338 ORTHO05D006102 1.4e-69 268.1 502 34.3
C03p80710 Brassica napus HOM05D002338 ORTHO05D006102 9.3e-69 265.4 294 50.0
HanXRQChr16g0517751 Helianthus annuus HOM05D002338 ORTHO05D006102 9.3e-69 265.4 281 43.8
SEGI_17381 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 5.1e-67 259.6 620 31.3
ATR0794G026 Amborella trichopoda HOM05D002338 ORTHO05D006102 6.7e-67 259.2 579 33.0
Solyc03g006177.2 Solanum lycopersicum HOM05D002338 ORTHO05D006102 1.5e-66 258.1 329 45.3
HPP92_006302 Vanilla planifolia HOM05D002338 ORTHO05D006102 4.1e-64 250.0 419 39.1
FAN16G2383 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.0e-63 247.7 289 45.7
TAR627G0524 Trochodendron aralioides HOM05D002338 ORTHO05D006102 4.3e-58 229.9 222 48.2
HanXRQChr16g0518151 Helianthus annuus HOM05D002338 ORTHO05D006102 1.4e-51 208.4 325 38.8
Zm00001eb175250 Zea mays HOM05D002338 ORTHO05D006102 1.4e-51 208.4 573 30.5
Pp3c3_11130 Physcomitrium patens HOM05D002338 ORTHO05D006102 5.3e-48 196.4 557 28.5
Psat1g166240 Pisum sativum HOM05D002338 ORTHO05D006102 5.0e-46 189.9 319 39.8
BcaNung03637 Brassica carinata HOM05D002338 ORTHO05D006102 2.7e-44 184.1 290 40.7
Mapoly0022s0109 Marchantia polymorpha HOM05D002338 ORTHO05D006102 3.3e-42 177.2 557 26.6
BolC3t20316H Brassica oleracea HOM05D002338 ORTHO05D006102 5.2e-35 153.3 126 63.5
BcaNung03636 Brassica carinata HOM05D002338 ORTHO05D006102 2.6e-34 151.0 105 67.6
AagrBONN_evm.TU.Sc2ySwM_228.3636 Anthoceros agrestis HOM05D002338 ORTHO05D006102 2.2e-33 147.9 547 24.9
SMO137G0058 Selaginella moellendorffii HOM05D002338 ORTHO05D006102 1.8e-24 118.2 319 25.7
SEGI_36544 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 2.4e-16 91.3 210 34.8
FvH4_3g07850 Fragaria vesca HOM05D009570 ORTHO05D009451 3.5e-15 87.4 98 44.9
BolC3t20315H Brassica oleracea HOM05D002338 ORTHO05D006102 9.5e-13 79.3 95 49.5
Os08g0532500 Oryza sativa ssp. japonica HOM05D002338 ORTHO05D006102 1.2e-12 79.0 275 26.2
FAN06G1043 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.2e-10 72.4 96 41.7
Atru.chr10.1674 Acer truncatum HOM05D002338 ORTHO05D006102 2.0e-10 71.6 101 43.6
Sc05g0007150 Simmondsia chinensis HOM05D002338 ORTHO05D006102 7.5e-10 69.7 71 52.1
Solyc05g023840.1 Solanum lycopersicum HOM05D002338 ORTHO05D006102 9.8e-10 69.3 122 36.1
TAR627G0992 Trochodendron aralioides HOM05D002338 ORTHO05D006102 1.3e-09 68.9 119 36.1
Psat6g197040 Pisum sativum HOM05D002338 ORTHO05D006102 2.2e-09 68.2 200 31.0
MCO04G551 Micromonas commoda HOM05D002338 ORTHO05D006102 1.4e-08 65.5 196 24.5
TPR.G39999 Trifolium pratense HOM05D002338 ORTHO05D006102 4.1e-08 63.9 56 46.4
FAN10G3983 Fragaria x ananassa HOM05D002338 ORTHO05D006102 7.0e-08 63.2 53 56.6
Actinidia16798 Actinidia chinensis HOM05D002338 ORTHO05D006102 1.0e-06 59.3 156 25.0
ATR0582G311 Amborella trichopoda HOM05D002338 ORTHO05D006102 5.0e-06 57.0 52 50.0


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