Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G6620 Aethionema arabicum HOM05D007082 ORTHO05D008895 1.8e-87 325.9 164 100.0
THA.LOC104800748 Tarenaya hassleriana HOM05D007082 ORTHO05D008895 5.0e-61 238.0 155 75.5
AL1G17250 Arabidopsis lyrata HOM05D007082 ORTHO05D008895 8.8e-58 227.3 156 71.2
AT1G07130 Arabidopsis thaliana HOM05D007082 ORTHO05D008895 1.5e-57 226.5 157 70.1
Sp1g05880 Schrenkiella parvula HOM05D007082 ORTHO05D008895 3.1e-55 218.8 158 67.7
Carub.0001s0641 Capsella rubella HOM05D007082 ORTHO05D008895 1.2e-54 216.9 158 67.1
CARHR006820 Cardamine hirsuta HOM05D007082 ORTHO05D008895 1.2e-54 216.9 158 68.4
Thhalv10008979m.g Eutrema salsugineum HOM05D007082 ORTHO05D008895 4.5e-54 214.9 158 67.1
A08p35770 Brassica napus HOM05D007082 ORTHO05D008895 4.0e-50 201.8 158 63.9
BraA08t35483Z Brassica rapa HOM05D007082 ORTHO05D008895 4.0e-50 201.8 158 63.9
BolC8t47089H Brassica oleracea HOM05D007082 ORTHO05D008895 6.8e-50 201.1 158 62.7
C08p02920 Brassica napus HOM05D007082 ORTHO05D008895 2.6e-49 199.1 158 62.0
BolC8t47080H Brassica oleracea HOM05D007082 ORTHO05D008895 3.7e-48 195.3 158 61.4
BcaB03g13405 Brassica carinata HOM05D007082 ORTHO05D008895 7.8e-46 187.6 156 58.3
Ciclev10022619m.g Citrus clementina HOM05D007082 ORTHO05D008895 2.3e-45 186.0 154 61.0
Dinv32900 Davidia involucrata HOM05D007082 ORTHO05D008895 2.9e-45 185.7 149 62.4
CiPaw.07G089100 Carya illinoinensis HOM05D007082 ORTHO05D008895 3.8e-45 185.3 156 62.8
C08p02850 Brassica napus HOM05D007082 ORTHO05D008895 5.0e-45 184.9 172 54.7
Haze_04674 Corylus avellana HOM05D007082 ORTHO05D008895 2.5e-44 182.6 158 59.5
RcHm_v2.0_Chr6g0290411 Rosa chinensis HOM05D007082 ORTHO05D008895 2.5e-44 182.6 155 60.0
Thecc.05G027700 Theobroma cacao HOM05D007082 ORTHO05D008895 3.3e-44 182.2 152 59.2
Atru.chr5.1487 Acer truncatum HOM05D000296 ORTHO05D000175 5.6e-44 181.4 162 59.9
Cfa004492 Carpinus fangiana HOM05D007082 ORTHO05D008895 9.5e-44 180.6 158 60.1
Eucgr.H01442 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.2e-43 180.3 154 57.8
Cc01_g19180 Coffea canephora HOM05D007082 ORTHO05D008895 2.1e-43 179.5 151 58.9
Oeu025749.1 Olea europaea HOM05D007082 ORTHO05D008895 3.6e-43 178.7 160 55.6
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 1.0e-42 177.2 161 57.8
Eucgr.H01429 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.4e-42 176.8 154 55.8
Potri.005G212900 Populus trichocarpa HOM05D007082 ORTHO05D008895 1.4e-42 176.8 160 56.2
Lj2P1167T48 Lonicera japonica HOM05D007082 ORTHO05D008895 1.8e-42 176.4 150 56.0
TWI12G0539 Tripterygium wilfordii HOM05D007082 ORTHO05D008895 2.3e-42 176.0 158 58.9
CANSAT25G2376 Cannabis sativa HOM05D007082 ORTHO05D008895 3.0e-42 175.6 156 57.7
MD03G1260600 Malus domestica HOM05D007082 ORTHO05D008895 4.0e-42 175.3 159 57.9
FvH4_2g23151 Fragaria vesca HOM05D007082 ORTHO05D008895 5.2e-42 174.9 155 56.8
Medtr1g033230 Medicago truncatula HOM05D007082 ORTHO05D008895 6.8e-42 174.5 154 57.1
Rhsim13G0027400 Rhododendron simsii HOM05D007082 ORTHO05D008895 6.8e-42 174.5 154 57.8
Eucgr.H01435 Eucalyptus grandis HOM05D007082 ORTHO05D008895 8.9e-42 174.1 154 55.8
vmacro14749 Vaccinium macrocarpon HOM05D007082 ORTHO05D008895 1.5e-41 173.3 162 52.5
CSS0021912 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 2.6e-41 172.6 153 55.6
CSS0029740 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 2.6e-41 172.6 153 55.6
Medtr5g020430 Medicago truncatula HOM05D007082 ORTHO05D008895 3.4e-41 172.2 154 55.8
Psat6g025560 Pisum sativum HOM05D007082 ORTHO05D008895 3.4e-41 172.2 156 55.8
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 3.4e-41 172.2 151 58.9
Eucgr.H01418 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.4e-41 171.8 151 55.0
TAR622G1184 Trochodendron aralioides HOM05D007082 ORTHO05D008895 4.4e-41 171.8 149 55.0
COL.COLO4_14680 Corchorus olitorius HOM05D007082 ORTHO05D008895 5.8e-41 171.4 151 55.6
DCAR_002714 Daucus carota HOM05D007082 ORTHO05D008895 9.8e-41 170.6 161 53.4
Duzib128G1180 Durio zibethinus HOM05D007082 ORTHO05D008895 9.8e-41 170.6 151 55.6
FAN20G2212 Fragaria x ananassa HOM05D007082 ORTHO05D008895 9.8e-41 170.6 155 55.5
SalBow4G2456 Salvia bowleyana HOM05D007082 ORTHO05D008895 9.8e-41 170.6 150 56.0
Haze_10047 Corylus avellana HOM05D007082 ORTHO05D008895 1.3e-40 170.2 158 56.3
QL12p020738 Quercus lobata HOM05D007082 ORTHO05D008895 1.7e-40 169.9 154 57.1
MSTRG.18253 Avicennia marina HOM05D007082 ORTHO05D008895 2.2e-40 169.5 151 54.3
PGR119G0159 Punica granatum HOM05D007082 ORTHO05D008895 2.2e-40 169.5 155 59.4
SGA_v2.0_scaffold1G00512 Striga asiatica HOM05D007082 ORTHO05D008895 2.2e-40 169.5 155 54.8
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 2.9e-40 169.1 154 53.9
CAN.G410.16 Capsicum annuum HOM05D007082 ORTHO05D008895 3.7e-40 168.7 151 57.0
Nitab4.5_0016351g0010 Nicotiana tabacum HOM05D007082 ORTHO05D008895 3.7e-40 168.7 150 57.3
TPR.G34570 Trifolium pratense HOM05D007082 ORTHO05D008895 3.7e-40 168.7 154 54.5
Migut.D00329 Erythranthe guttata HOM05D007082 ORTHO05D008895 1.1e-39 167.2 154 55.2
Lj2g0002316 Lotus japonicus HOM05D007082 ORTHO05D008895 1.4e-39 166.8 157 54.8
Sopen01g035010 Solanum pennellii HOM05D007082 ORTHO05D008895 2.4e-39 166.0 150 56.0
Manes.01G205300 Manihot esculenta HOM05D007082 ORTHO05D008895 7.0e-39 164.5 157 57.3
HanXRQChr05g0154391 Helianthus annuus HOM05D007082 ORTHO05D008895 1.2e-38 163.7 153 52.9
Psat6g050280 Pisum sativum HOM05D007082 ORTHO05D008895 1.2e-38 163.7 156 53.2
Hund09516 Selenicereus undatus HOM05D007082 ORTHO05D008895 6.0e-38 161.4 157 54.8
Haze_10052 Corylus avellana HOM05D007082 ORTHO05D008895 7.8e-38 161.0 158 53.2
SHI10976 Sapria himalayana HOM05D007082 ORTHO05D008895 1.3e-37 160.2 150 56.0
Lsat_1_v5_gn_9_6120 Lactuca sativa HOM05D007082 ORTHO05D008895 1.7e-37 159.8 152 53.9
MBI19_g34822_MAGBIO Magnolia biondii HOM05D007082 ORTHO05D008895 2.3e-37 159.5 146 55.5
Cpa.g.sc41.65 Carica papaya HOM05D007082 ORTHO05D008895 3.0e-37 159.1 157 52.9
Lsat_1_v5_gn_9_86820 Lactuca sativa HOM05D007082 ORTHO05D008895 3.0e-37 159.1 151 53.0
Nn5g27058 Nelumbo nucifera HOM05D007082 ORTHO05D008895 3.0e-37 159.1 157 53.5
Lalb_Chr10g0095561 Lupinus albus HOM05D007082 ORTHO05D008895 1.1e-36 157.1 153 52.3
Gorai.001G088200 Gossypium raimondii HOM05D007082 ORTHO05D008895 3.3e-36 155.6 151 51.0
Gohir.D07G082600 Gossypium hirsutum HOM05D007082 ORTHO05D008895 5.6e-36 154.8 151 50.3
Ah.11g050380 Amaranthus hybridus HOM05D007082 ORTHO05D008895 1.6e-35 153.3 166 51.2
EL10Ac5g10526 Beta vulgaris HOM05D007082 ORTHO05D008895 1.6e-35 153.3 162 48.8
CsaV3_2G013600 Cucumis sativus L. HOM05D007082 ORTHO05D008895 2.1e-35 152.9 154 53.2
PSO832G2607 Papaver somniferum HOM05D007082 ORTHO05D008895 2.1e-35 152.9 157 51.6
arahy.Tifrunner.gnm1.ann1.4F6QX0 Arachis hypogaea HOM05D007082 ORTHO05D008895 2.8e-35 152.5 162 51.2
PSO210G1980 Papaver somniferum HOM05D007082 ORTHO05D008895 2.8e-35 152.5 157 51.6
Sed0015110 Sechium edule HOM05D007082 ORTHO05D008895 3.6e-35 152.1 161 50.9
Os03g0366900 Oryza sativa ssp. japonica HOM05D007082 ORTHO05D008895 6.2e-35 151.4 159 50.3
MELO3C014298.2 Cucumis melo HOM05D007082 ORTHO05D008895 1.1e-34 150.6 154 52.6
arahy.Tifrunner.gnm1.ann1.CZ80LA Arachis hypogaea HOM05D007082 ORTHO05D008895 2.3e-34 149.4 161 50.3
CDE05G2411 Ceratophyllum demersum HOM05D007082 ORTHO05D008895 2.3e-34 149.4 148 48.0
Zm00001eb394240 Zea mays HOM05D007082 ORTHO05D008895 6.8e-34 147.9 161 49.1
ClCG07G000420 Citrullus lanatus HOM05D007082 ORTHO05D008895 1.5e-33 146.7 157 49.7
Sc05g0001390 Simmondsia chinensis HOM05D007082 ORTHO05D008895 7.5e-33 144.4 150 50.7
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 5.4e-31 138.3 152 50.0
SEGI_21621 Sequoiadendron giganteum HOM05D007082 ORTHO05D008895 7.0e-31 137.9 150 46.7
HanXRQChr16g0516211 Helianthus annuus HOM05D007082 ORTHO05D008895 1.2e-30 137.1 141 50.4
Glyma.08G176000 Glycine max HOM05D007082 ORTHO05D008895 1.3e-29 133.7 157 49.0
Eucgr.L00806 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.5e-28 130.2 154 44.8
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 1.9e-28 129.8 156 42.9
ECA247G0055 Erigeron canadensis HOM05D007082 ORTHO05D008895 5.6e-28 128.3 118 53.4
Gohir.A07G077800 Gossypium hirsutum HOM05D007082 ORTHO05D008895 7.3e-28 127.9 151 45.0
VMungo1215G3041 Vigna mungo HOM05D007082 ORTHO05D008895 1.6e-27 126.7 157 49.7
Mapoly0041s0121 Marchantia polymorpha HOM05D007082 ORTHO05D008895 4.7e-27 125.2 147 42.9
MD15G1065600 Malus domestica HOM05D007082 ORTHO05D008895 4.0e-26 122.1 126 54.8
AUR62011993 Chenopodium quinoa HOM05D007082 ORTHO05D008895 9.9e-25 117.5 164 44.5
AUR62032313 Chenopodium quinoa HOM05D007082 ORTHO05D008895 9.9e-25 117.5 164 44.5
Phvul.003G015400 Phaseolus vulgaris HOM05D007082 ORTHO05D008895 6.4e-24 114.8 148 50.0
Lj3g0026065 Lotus japonicus HOM05D007082 ORTHO05D008895 2.4e-23 112.8 117 48.7
Pp3c1_6180 Physcomitrium patens HOM05D007082 ORTHO05D008895 2.4e-23 112.8 147 38.8
ATR0580G091 Amborella trichopoda HOM05D007082 ORTHO05D008895 1.6e-22 110.2 148 42.6
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 1.0e-21 107.5 154 41.6
AagrBONN_evm.TU.Sc2ySwM_117.1416 Anthoceros agrestis HOM05D007082 ORTHO05D008895 6.6e-21 104.8 150 36.7
Aqoxy5G02465 Aquilegia oxysepala HOM05D007082 ORTHO05D008895 6.6e-21 104.8 162 39.5
Medtr5g020340 Medicago truncatula HOM05D000096 ORTHO05D008895 3.1e-18 95.9 146 41.1
MCO14G264 Micromonas commoda HOM05D007082 ORTHO05D008895 8.1e-11 71.2 111 34.2
SMO307G0023 Selaginella moellendorffii HOM05D007082 ORTHO05D008895 5.2e-10 68.6 134 29.9
Actinidia09115 Actinidia chinensis HOM05D007082 ORTHO05D008895 1.3e-08 63.9 45 55.6
SalBow6G5526 Salvia bowleyana HOM05D002728 ORTHO05D002874 3.2e-07 59.3 155 27.7
Peaxi162Scf01115g00007 Petunia axillaris HOM05D007082 ORTHO05D008895 2.7e-06 56.2 52 57.7
PRCOL_00001098 Prasinoderma coloniale HOM05D007082 ORTHO05D008895 2.7e-06 56.2 173 27.7
Sc06g0001190 Simmondsia chinensis HOM05D002728 ORTHO05D002874 4.6e-06 55.5 145 24.1
Actinidia17316 Actinidia chinensis HOM05D002728 ORTHO05D002874 7.8e-06 54.7 155 23.2


User provided reference genes

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