Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 7.3e-246 853.6 479 100.0
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 2.9e-170 602.4 486 70.0
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 1.5e-166 590.1 482 72.6
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 5.8e-166 588.2 483 65.8
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 7.5e-166 587.8 478 65.1
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 1.4e-164 583.6 478 71.3
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 1.9e-164 583.2 479 64.9
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 8.6e-162 574.3 483 71.0
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 2.1e-160 569.7 482 68.7
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 4.7e-160 568.5 483 70.6
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 8.1e-160 567.8 483 70.4
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 1.8e-159 566.6 477 64.4
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 3.1e-159 565.8 475 64.0
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 6.8e-159 564.7 481 68.4
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 1.2e-158 563.9 480 71.7
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 1.7e-157 560.1 472 69.9
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 2.9e-157 559.3 479 68.1
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 2.9e-157 559.3 456 72.8
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 3.7e-157 558.9 482 67.0
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 1.1e-156 557.4 484 69.6
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 3.9e-154 548.9 482 67.6
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.2e-150 537.3 482 68.3
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 7.1e-148 528.1 478 66.3
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 7.1e-148 528.1 478 66.3
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 1.5e-145 520.4 479 65.3
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 7.3e-145 518.1 487 61.0
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 2.8e-144 516.2 475 65.9
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 3.6e-144 515.8 478 65.9
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 3.6e-144 515.8 491 60.3
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 1.5e-142 510.4 487 60.8
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 3.2e-140 502.7 477 60.8
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 5.4e-140 501.9 479 58.2
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 5.4e-140 501.9 492 58.9
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 7.1e-140 501.5 483 63.6
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 7.1e-140 501.5 452 62.4
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 7.1e-140 501.5 492 60.4
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 1.6e-139 500.4 477 60.6
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 7.8e-139 498.0 477 63.5
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 1.0e-138 497.7 478 63.8
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 1.3e-138 497.3 452 59.7
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 2.3e-138 496.5 452 61.9
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 3.9e-138 495.7 477 62.9
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 3.9e-138 495.7 477 61.0
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 4.8e-136 488.8 484 57.6
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 6.9e-135 485.0 494 55.3
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 1.2e-134 484.2 495 55.8
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 4.4e-134 482.3 462 58.9
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 5.8e-134 481.9 479 56.2
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 5.8e-134 481.9 481 62.6
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 1.7e-133 480.3 485 58.8
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.2e-133 479.9 482 55.4
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 2.2e-133 479.9 501 56.3
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 6.4e-133 478.4 482 57.7
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 1.9e-132 476.9 477 62.7
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 5.4e-132 475.3 483 56.7
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 5.4e-132 475.3 391 63.4
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 5.4e-132 475.3 496 55.6
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 1.6e-131 473.8 463 55.5
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 2.1e-131 473.4 482 55.6
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 2.1e-131 473.4 472 57.2
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 4.6e-131 472.2 488 58.2
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 4.6e-131 472.2 502 55.8
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 4.6e-131 472.2 470 59.1
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 6.0e-131 471.9 481 59.0
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 7.9e-131 471.5 483 57.8
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 1.0e-130 471.1 491 59.7
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 1.0e-130 471.1 489 59.5
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 1.3e-130 470.7 476 61.1
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 2.3e-130 469.9 469 57.1
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 6.6e-130 468.4 473 61.1
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 1.5e-129 467.2 481 62.4
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 1.9e-129 466.8 428 58.9
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 4.3e-129 465.7 474 59.9
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 5.6e-129 465.3 490 59.2
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 2.1e-128 463.4 477 57.7
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 2.8e-128 463.0 476 56.1
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 1.8e-127 460.3 484 55.0
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 3.1e-127 459.5 472 54.9
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 4.0e-127 459.1 483 55.7
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 5.3e-127 458.8 481 53.2
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 5.3e-127 458.8 481 55.9
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 6.9e-127 458.4 495 53.1
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 9.0e-127 458.0 483 55.3
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 9.0e-127 458.0 388 65.7
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 9.0e-127 458.0 493 58.0
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 9.0e-127 458.0 391 61.1
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 3.4e-126 456.1 459 55.3
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 5.8e-126 455.3 462 55.8
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 1.3e-125 454.1 484 54.5
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 1.7e-125 453.8 483 53.8
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 2.2e-125 453.4 477 53.2
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 2.9e-125 453.0 491 52.3
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 4.9e-125 452.2 420 58.6
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 6.4e-125 451.8 493 57.4
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 1.9e-124 450.3 482 52.5
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 1.9e-124 450.3 459 54.0
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 4.2e-124 449.1 461 54.4
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 5.5e-124 448.7 461 55.3
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 9.3e-124 448.0 482 54.8
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 1.2e-123 447.6 494 52.4
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 1.6e-123 447.2 461 55.1
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 2.1e-123 446.8 393 64.4
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 3.5e-123 446.0 387 60.7
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 4.6e-123 445.7 475 57.1
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 7.9e-123 444.9 473 52.6
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 3.0e-122 443.0 474 51.9
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 5.1e-122 442.2 474 55.9
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 1.1e-121 441.0 479 52.0
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 5.6e-121 438.7 490 53.9
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 5.6e-121 438.7 475 56.0
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 7.4e-121 438.3 474 55.3
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 1.3e-120 437.6 479 54.7
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 2.1e-120 436.8 473 53.5
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 2.1e-120 436.8 482 54.1
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 3.7e-120 436.0 394 59.1
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 4.8e-120 435.6 488 53.9
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 4.0e-119 432.6 456 55.5
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 5.3e-119 432.2 465 54.4
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 6.9e-119 431.8 481 53.6
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 2.0e-118 430.3 473 53.3
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 3.4e-118 429.5 416 56.2
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 5.8e-118 428.7 474 50.6
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 7.6e-118 428.3 463 52.3
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 2.2e-117 426.8 477 56.8
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 4.9e-117 425.6 473 52.4
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 1.4e-116 424.1 494 49.8
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 4.2e-116 422.5 495 50.3
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 1.6e-115 420.6 465 52.9
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 1.3e-114 417.5 487 51.1
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 2.3e-114 416.8 467 48.4
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 1.1e-113 414.5 317 65.9
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.5e-113 414.1 383 58.2
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 2.5e-113 413.3 458 52.6
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 9.6e-113 411.4 480 54.6
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 1.6e-112 410.6 485 53.2
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 2.6e-110 403.3 478 49.2
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 3.4e-110 402.9 481 50.1
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 2.2e-109 400.2 268 73.5
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 3.8e-109 399.4 410 52.4
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 2.7e-107 393.3 392 53.1
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 2.3e-106 390.2 497 48.9
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 1.1e-105 387.9 450 51.1
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 6.3e-104 382.1 408 53.9
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 3.1e-103 379.8 450 52.9
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 2.5e-100 370.2 389 55.8
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 3.7e-96 356.3 477 44.4
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 1.2e-94 351.3 477 53.0
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 2.4e-87 327.0 391 47.6
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 2.7e-78 297.0 459 38.8
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 2.5e-76 290.4 477 41.1
SEGI_11230 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 2.2e-72 277.3 321 48.0
BcaC01g04842 Brassica carinata HOM05D003925 ORTHO05D004832 5.0e-61 239.6 333 49.5
AagrBONN_evm.TU.Sc2ySwM_362.431 Anthoceros agrestis HOM05D003925 ORTHO05D004832 4.7e-59 233.0 335 41.5
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 9.2e-55 218.8 191 59.7
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 2.1e-51 207.6 195 69.2
SHI34757 Sapria himalayana HOM05D003925 ORTHO05D004832 1.2e-46 191.8 224 49.1
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 1.1e-44 185.3 360 33.1
CAN.G697.8 Capsicum annuum HOM05D003925 ORTHO05D004832 3.9e-37 160.2 117 63.2
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 3.3e-36 157.1 137 68.6
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.0e-33 147.9 129 68.2
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 1.7e-32 144.8 147 49.0
AL3G33580 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 2.4e-31 141.0 314 39.2
Lalb_Chr20g0123671 Lupinus albus HOM05D003925 ORTHO05D004832 6.0e-30 136.3 99 64.6
Cre02.g106300 Chlamydomonas reinhardtii HOM05D003925 ORTHO05D004832 1.5e-28 131.7 341 29.6
CARHR216310 Cardamine hirsuta HOM05D003925 ORTHO05D004832 2.5e-28 131.0 99 68.7
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 8.9e-26 122.5 145 49.7
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 1.5e-25 121.7 129 53.5
MCO13G620 Micromonas commoda HOM05D003925 ORTHO05D004832 5.1e-21 106.7 337 27.3
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 1.9e-20 104.8 316 29.1
Zm00001eb254380 Zea mays HOM05D002934 ORTHO05D004560 1.5e-17 95.1 162 35.2
Zm00001eb276420 Zea mays HOM05D002934 ORTHO05D004560 1.5e-17 95.1 162 35.2
CAN.G386.33 Capsicum annuum HOM05D003925 ORTHO05D004832 2.9e-16 90.9 71 53.5
CAN.G963.3 Capsicum annuum HOM05D003925 ORTHO05D004832 1.3e-11 75.5 47 70.2
BolC8t48574H Brassica oleracea HOM05D003925 ORTHO05D004832 4.8e-11 73.6 107 48.6


User provided reference genes

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