Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G5270 Aethionema arabicum HOM05D008427 ORTHO05D010551 1.7e-117 426.0 211 100.0
Thhalv10021553m.g Eutrema salsugineum HOM05D008427 ORTHO05D010551 4.0e-95 351.7 202 84.2
BraA05t22555Z Brassica rapa HOM05D008427 ORTHO05D010551 1.7e-93 346.3 202 82.7
A05p37570 Brassica napus HOM05D008427 ORTHO05D010551 2.2e-93 345.9 202 83.2
BcaC05g29332 Brassica carinata HOM05D008427 ORTHO05D010551 2.9e-93 345.5 202 82.7
Sp3g10000 Schrenkiella parvula HOM05D008427 ORTHO05D010551 3.7e-93 345.1 202 82.2
AL3G23340 Arabidopsis lyrata HOM05D008427 ORTHO05D010551 1.1e-92 343.6 202 81.7
BcaB06g25585 Brassica carinata HOM05D008427 ORTHO05D010551 1.4e-92 343.2 202 81.7
CARHR086320 Cardamine hirsuta HOM05D008427 ORTHO05D010551 3.2e-92 342.0 202 80.7
AT3G11770 Arabidopsis thaliana HOM05D008427 ORTHO05D010551 4.1e-92 341.7 202 82.2
C05p56140 Brassica napus HOM05D008427 ORTHO05D010551 1.2e-91 340.1 202 81.7
BolC5t34280H Brassica oleracea HOM05D008427 ORTHO05D010551 1.2e-91 340.1 202 81.7
Carub.0003s1111 Capsella rubella HOM05D008427 ORTHO05D010551 3.9e-90 335.1 202 79.7
BcaC09g48194 Brassica carinata HOM05D008427 ORTHO05D010551 2.1e-88 329.3 209 78.9
BolC1t05289H Brassica oleracea HOM05D008427 ORTHO05D010551 2.3e-87 325.9 202 80.2
BraA01t04160Z Brassica rapa HOM05D008427 ORTHO05D010551 4.0e-87 325.1 202 80.2
BcaB04g21117 Brassica carinata HOM05D008427 ORTHO05D010551 6.4e-85 317.8 203 78.8
AT5G06450 Arabidopsis thaliana HOM05D008427 ORTHO05D010551 2.7e-83 312.4 203 76.4
Sp6g36410 Schrenkiella parvula HOM05D008427 ORTHO05D010551 7.8e-83 310.8 201 74.6
AL6G16540 Arabidopsis lyrata HOM05D008427 ORTHO05D010551 1.1e-81 307.0 203 75.9
Carub.0006s0533 Capsella rubella HOM05D008427 ORTHO05D010551 2.5e-81 305.8 203 75.4
CARHR206740 Cardamine hirsuta HOM05D008427 ORTHO05D010551 3.1e-79 298.9 201 72.1
THA.LOC104816634 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 8.9e-79 297.4 201 69.7
Aa31sc52G280 Aethionema arabicum HOM05D008427 ORTHO05D010551 1.2e-78 297.0 202 71.3
THA.LOC104826796 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 3.4e-78 295.4 205 66.8
A03p02740 Brassica napus HOM05D008427 ORTHO05D010551 6.4e-77 291.2 202 70.3
BraA03t09637Z Brassica rapa HOM05D008427 ORTHO05D010551 6.4e-77 291.2 202 70.3
BolC3t12861H Brassica oleracea HOM05D008427 ORTHO05D010551 4.2e-76 288.5 202 69.8
C03p03160 Brassica napus HOM05D008427 ORTHO05D010551 3.9e-74 282.0 202 68.8
BcaB01g05993 Brassica carinata HOM05D008427 ORTHO05D010551 2.3e-66 256.1 200 64.0
Aa31sc52G270 Aethionema arabicum HOM05D008427 ORTHO05D010551 1.1e-65 253.8 201 62.7
THA.LOC104816632 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 3.0e-58 229.2 203 59.6
THA.LOC104816633 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 1.3e-53 213.8 203 54.7
BcaB07g32741 Brassica carinata HOM05D008427 ORTHO05D010551 8.8e-34 147.9 121 62.8
Thhalv10015043m.g Eutrema salsugineum HOM05D008427 ORTHO05D010551 2.1e-27 126.7 201 38.3
BcaB03g16229 Brassica carinata HOM05D008427 ORTHO05D010551 3.7e-24 115.9 77 74.0
Thecc.05G267200 Theobroma cacao HOM05D008427 ORTHO05D010551 1.4e-18 97.4 197 32.5
Thecc.05G267100 Theobroma cacao HOM05D008427 ORTHO05D010551 9.1e-15 84.7 194 29.4
BcaB06g26930 Brassica carinata HOM05D008427 ORTHO05D010551 8.5e-13 78.2 46 82.6
Potri.019G021900 Populus trichocarpa HOM05D008427 ORTHO05D010551 1.1e-12 77.8 227 29.5
Prupe.4G202600 Prunus persica HOM05D008427 ORTHO05D010551 1.1e-12 77.8 194 30.9
Atru.chr2.1085 Acer truncatum HOM05D008427 ORTHO05D010551 2.5e-12 76.6 198 29.3
Sabra19G0033300 Salix brachista HOM05D008427 ORTHO05D010551 2.5e-12 76.6 223 29.1
SHI23918 Sapria himalayana HOM05D008427 ORTHO05D000525 3.0e-10 69.7 238 24.8
TPR.G38682 Trifolium pratense HOM05D000886 ORTHO05D000525 5.2e-10 68.9 163 28.2
RcHm_v2.0_Chr5g0037631 Rosa chinensis HOM05D008427 ORTHO05D010551 1.2e-09 67.8 159 29.6
Atru.chr2.1074 Acer truncatum HOM05D008427 ORTHO05D010551 3.4e-09 66.2 128 32.8
COL.COLO4_15529 Corchorus olitorius HOM05D008427 ORTHO05D010551 3.4e-09 66.2 203 25.1
FvH4_3g21850 Fragaria vesca HOM05D000886 ORTHO05D010551 9.8e-09 64.7 131 29.8
FAN11G0335 Fragaria x ananassa HOM05D000886 ORTHO05D010551 9.8e-09 64.7 131 29.8
TPR.G31753 Trifolium pratense HOM05D000886 ORTHO05D000525 2.8e-08 63.2 194 24.7
TPR.G40213 Trifolium pratense HOM05D000886 ORTHO05D000525 1.1e-07 61.2 156 27.6
Atru.chr2.1077 Acer truncatum HOM05D008427 ORTHO05D010551 1.4e-07 60.8 133 33.8
Potri.013G049000 Populus trichocarpa HOM05D000886 ORTHO05D010551 1.4e-07 60.8 201 25.9
Sabra13G0045300 Salix brachista HOM05D000886 ORTHO05D000525 1.2e-06 57.8 91 37.4
Haze_00024 Corylus avellana HOM05D000886 ORTHO05D000525 2.0e-06 57.0 199 27.6
Gohir.A11G245100 Gossypium hirsutum HOM05D000886 ORTHO05D000525 2.0e-06 57.0 167 29.9
Duzib128G1006 Durio zibethinus HOM05D000886 ORTHO05D000525 2.7e-06 56.6 107 32.7
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.5e-06 56.2 187 26.7
Migut.E01697 Erythranthe guttata HOM05D000886 ORTHO05D000525 7.7e-06 55.1 164 27.4


User provided reference genes

Program Settings